Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV17a02r
(918 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0617 - 18981258-18981949,18983869-18984427 69 7e-12
01_03_0044 - 11927272-11928516 67 2e-11
12_02_0680 + 21903520-21904093,21904474-21905162 63 3e-10
12_02_0656 + 21601782-21601925,21602249-21602460,21602686-216028... 31 1.3
05_06_0102 - 25589011-25589181,25589269-25589496,25589589-255899... 31 1.7
01_07_0126 - 41222916-41222942,41223120-41223190,41223478-412235... 30 2.2
08_02_0585 + 19014674-19014871,19014987-19015132,19016742-190168... 30 3.0
04_03_0238 - 13193508-13193946,13194010-13194062 30 3.0
07_03_1562 - 27738369-27738568,27738767-27738962,27739079-277392... 29 6.8
03_05_1155 + 30808985-30809084,30809531-30809632,30809727-308098... 29 6.8
02_05_1050 - 33757432-33757664,33757767-33758645,33758720-337591... 29 6.8
11_03_0212 - 11761856-11762037,11762302-11762398,11763571-117645... 28 9.0
06_01_0429 - 3056302-3056570,3056681-3056951,3057055-3057206,305... 28 9.0
03_05_1047 + 29935929-29935974,29948868-29949709,29950162-29950350 28 9.0
02_04_0347 + 22193708-22193720,22194317-22194390,22195388-221961... 28 9.0
>09_04_0617 - 18981258-18981949,18983869-18984427
Length = 416
Score = 68.5 bits (160), Expect = 7e-12
Identities = 74/296 (25%), Positives = 125/296 (42%), Gaps = 29/296 (9%)
Frame = -3
Query: 817 DNARRSAEIYGLEIENMTAEDIKKRWNGI-QVPGDYVGVFEPDAGFLRSELAVNAYVKLS 641
D A R++ + G E + W+G+ ++P + G +++ AV + L+
Sbjct: 108 DPALRASIVNGAATEVASDAAAPWPWSGVFRLPEGWTAATSEIGGVMKATKAVAMFQSLA 167
Query: 640 KEAGAHQIFDCKVSSXXXXXXXXXXXXEKG--IFKGRKALVSAGTWVKDLLPN-----LP 482
+ GA +V F G K +++ G W L+ + LP
Sbjct: 168 AKNGAVVRDRTEVVGIAKQGDGSIVVKTSSGEEFHGAKCIITVGAWASKLVRSVAGVDLP 227
Query: 481 ISPVRKVLTWYASDPCYKN--IP--GF--LVNLEQDFFYGFPADE--NGFKIAKHSGGQ- 329
+ P+ ++ ++ + P ++ P GF + + Y P+ E K+A H G
Sbjct: 228 VQPLHTLICYWRARPGREHELTPESGFPTFASYGDPYIYSTPSMEFPGLIKVAAHGGPPC 287
Query: 328 NISSRDELTPFGSREGDRTETLNFITNFLPN----TGGILEGKTCSYDMSPDEDFIIDTL 161
+ RD L G+ G +I +P GG + + C Y M+PDEDFIID +
Sbjct: 288 DPDRRDWLA--GAGAGLVEPVARWIDEVMPGHVDTAGGPVIRQPCMYSMTPDEDFIIDFV 345
Query: 160 PG--SENVMLVTGLSGHGFKFTSVLGEIAAFFAGD------KKPGFDIRPFALNRF 17
G ++V++ G SGHGFK +G I A A D + G ++R F + RF
Sbjct: 346 GGELGKDVVVGAGFSGHGFKMGPAVGRILAEMALDGEARTAAEAGVELRHFRIGRF 401
>01_03_0044 - 11927272-11928516
Length = 414
Score = 66.9 bits (156), Expect = 2e-11
Identities = 73/278 (26%), Positives = 114/278 (41%), Gaps = 30/278 (10%)
Frame = -3
Query: 760 EDIKKRWNGI--QVPGDYVG-VFEPDAGFLRSELAVNAYVKLSKEAGAHQIFDCKVSSXX 590
+D+ RW G VP +V V E G L + AV + L+ + GA + +V
Sbjct: 131 DDLAGRWGGAFRGVPDGWVAAVSELGGGVLNATKAVAMFQALAVKGGAVVRDNAEVVGVV 190
Query: 589 XXXXXXXXXXEKG---IFKGRKALVSAGTWVKDLLPN-----LPISPVRKVLTWYASDP- 437
F G K +V+ G W L+ + LPI P+ ++ ++ P
Sbjct: 191 KKDGEAGVFVRTSGGEEFHGAKCVVTVGAWTSKLVKSVAGVDLPIQPLHALVLYWKVKPG 250
Query: 436 ------CYKNIPGFLVNLEQDFFYGFPADENGFKIAKHSGGQNISSRDELTPFGSREGDR 275
P F + + YG P+ E I + G D G
Sbjct: 251 RERELAAEAGFPTFSSHGDPHV-YGTPSLELPGLIKINYDGGPPCDPDGRDWAGGGGDAA 309
Query: 274 TETLNFITNFLPN----TGGILEGKTCSYDMSPDEDFIIDTLPG--SENVMLVTGLSGHG 113
+ +I F+P+ GG + + C Y M+PD+DF+ID L G ++V++ G SGHG
Sbjct: 310 SRVARWIEEFMPDHVEAAGGPVVRQPCMYSMTPDKDFVIDFLGGEFGDDVVVGAGFSGHG 369
Query: 112 FKFTSVLGEIAAFFAGD------KKPGFDIRPFALNRF 17
FK +G I A A D + G ++R F ++RF
Sbjct: 370 FKMGPAVGRILAEMAMDGEARTAAEAGVELRHFRISRF 407
>12_02_0680 + 21903520-21904093,21904474-21905162
Length = 420
Score = 63.3 bits (147), Expect = 3e-10
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 19/181 (10%)
Frame = -3
Query: 547 FKGRKALVSAGTWVKDLLPN-----LPISPVRKVLTWYASDPCYKN--IP--GF--LVNL 401
F G K +++ G W L+ + LP+ P+ ++ ++ + P ++ P GF +
Sbjct: 206 FHGAKCIITVGAWASKLVKSVAGVDLPVQPLHTLICYWKARPGREHELTPESGFPTFASY 265
Query: 400 EQDFFYGFPADE--NGFKIAKHSGGQNISSRDELTPFGSREGDRTETLNFITNFLPN--- 236
Y P+ E K+ H G R + G D +I +P
Sbjct: 266 GDTCIYSTPSMEFPGLIKVCAHGGAPCDPDRRDWCAGGDALAD--PVARWIDELMPGHVD 323
Query: 235 -TGGILEGKTCSYDMSPDEDFIIDTLPG--SENVMLVTGLSGHGFKFTSVLGEIAAFFAG 65
GG + ++C Y M+PDEDFIID + G ++V++ G SGHGFK +G I A A
Sbjct: 324 TAGGPVIRQSCMYSMTPDEDFIIDFVGGEFGKDVVVGAGFSGHGFKMGPAVGRILAEMAM 383
Query: 64 D 62
D
Sbjct: 384 D 384
>12_02_0656 +
21601782-21601925,21602249-21602460,21602686-21602813,
21602905-21602986,21603308-21603406,21603619-21604054,
21604280-21604350,21604438-21604523,21604740-21604750
Length = 422
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +3
Query: 210 VLPSKIPPVFGKKFVIKFSVS 272
++PSKI VFGK++VI+ SVS
Sbjct: 273 IVPSKIKAVFGKQYVIRTSVS 293
>05_06_0102 -
25589011-25589181,25589269-25589496,25589589-25589933,
25590406-25590777,25590957-25591049,25591150-25591401,
25592019-25593224
Length = 888
Score = 30.7 bits (66), Expect = 1.7
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = -3
Query: 259 FITNFLPNTGGILEGKTCSYDMSPDEDFIIDTLPGSENVMLVT--GLSGHGFKFTSVLGE 86
F + L G G T ++D SPD F++ + +L GL G F F
Sbjct: 130 FPFHLLRTIPGFAAGVT-AFDWSPDSSFLLASCKDLTARLLPVKKGLGGKPFLFVGHRAA 188
Query: 85 IA-AFFAGDKKPG 50
+ AFFA DKK G
Sbjct: 189 VVGAFFATDKKTG 201
>01_07_0126 -
41222916-41222942,41223120-41223190,41223478-41223560,
41223587-41223653,41223740-41223848,41224431-41224511,
41224671-41224940,41225035-41226510,41226832-41226908,
41227812-41227912,41229397-41229660,41230964-41231136
Length = 932
Score = 30.3 bits (65), Expect = 2.2
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = -3
Query: 556 KGIFKGRKALVSAGTWV-KDLLPNLPISPVRKVLTWYA-SDPCYKNIPG-FLVNLEQDFF 386
K + +GR+ L++ K+LL +L ++ KVL A S +++ G F+++ EQD+
Sbjct: 783 KPLLEGRRVLITPNAKPSKELLKSLVVTAHGKVLERNAMSKMKNRSLMGAFVISCEQDYK 842
Query: 385 YGFPADENGFKI 350
P +NGF++
Sbjct: 843 ICVPFIKNGFEV 854
>08_02_0585 +
19014674-19014871,19014987-19015132,19016742-19016844,
19017064-19017250,19017368-19017461,19017570-19017723,
19018076-19018192,19018276-19018296,19019096-19019209,
19019970-19020152,19021032-19021239,19021326-19021447,
19021559-19021656,19021875-19022052,19022130-19022244,
19022331-19022398,19022526-19022603,19023737-19023814,
19023897-19024082
Length = 815
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -3
Query: 232 GGI-LEGKTCSYD-MSPDEDFIIDTLPGSENVMLVTGLSGHGFKFTSVLGEIAAFFAGDK 59
GGI LEG+ ++ + + D ++ T P S + + F E++ FFAG
Sbjct: 713 GGISLEGREVAWAWLKENWDHVLKTWPSSSLISDFVKSTVSRFTTEEKAAEVSEFFAGKT 772
Query: 58 KPGFD 44
KP F+
Sbjct: 773 KPSFE 777
>04_03_0238 - 13193508-13193946,13194010-13194062
Length = 163
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -3
Query: 844 HGSRGFEFIDNARRSAEIYGLEIENMTAEDIKKRWNGIQVPGDYVGVFEPDAG 686
HG RG F DN RRS L+ + T E + R +G + G +E AG
Sbjct: 38 HGGRGVGFADNRRRSE---ALQTKEATVEFVASRRSGQRAAPVGRGGYEGSAG 87
>07_03_1562 -
27738369-27738568,27738767-27738962,27739079-27739230,
27739775-27739832,27739923-27740038,27740117-27740237,
27740348-27740635,27740817-27740987,27741091-27741741,
27742515-27742676,27742764-27743904,27743992-27744152,
27744239-27744564,27745678-27745825
Length = 1296
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 420 GIFL*H-GSEAYHVKTFLTGDIGRLGSKSLTHVPAETSA 533
G+ + H G E+Y ++ L G +G+L +K+ V ++ A
Sbjct: 330 GVLIPHFGGESYKIRNSLVGVLGKLAAKAFKDVEGDSDA 368
>03_05_1155 +
30808985-30809084,30809531-30809632,30809727-30809800,
30810035-30810051,30810341-30810410,30810498-30810534,
30811010-30811057,30811298-30811385,30811407-30811512,
30812143-30812286
Length = 261
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 206 QLRHESGRRLHHRHPAWFGERYASDRSERPRF*IYKCARRN 84
Q +H S R +++ +P+ F E+ DR+ ++KC+R N
Sbjct: 49 QNKHCSKRDIYYMYPSIFQEQAVVDRAINDICVLFKCSRHN 89
>02_05_1050 -
33757432-33757664,33757767-33758645,33758720-33759109,
33759488-33759613,33760497-33760557
Length = 562
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/74 (22%), Positives = 31/74 (41%)
Frame = -3
Query: 520 AGTWVKDLLPNLPISPVRKVLTWYASDPCYKNIPGFLVNLEQDFFYGFPADENGFKIAKH 341
AG + P L I + + SDP Y N+ L+ ++ F + + ++ H
Sbjct: 424 AGATAPLVSPKLEIGKAKGSSSNVLSDPAYANVKALLIKQQEQLLQQFKSANSQPQV--H 481
Query: 340 SGGQNISSRDELTP 299
G ++ +DE P
Sbjct: 482 IKGPALTDKDEAPP 495
>11_03_0212 -
11761856-11762037,11762302-11762398,11763571-11764545,
11766172-11766263,11766450-11766510
Length = 468
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -3
Query: 916 ARELWKELNELT-KTKHLREVWSFEHGSRGFEFIDNARRSAEIYGLEIENMTAEDIKKRW 740
A L K+ LT + K W+ +H ++ + I N + + ++ ++EN+ ++ I RW
Sbjct: 375 AEILQKDRKILTERLKKKPPAWTAKH-TQAVKKIKNCKAAKDVLQKDVENLVSKQIFARW 433
Query: 739 NGI 731
I
Sbjct: 434 QAI 436
>06_01_0429 -
3056302-3056570,3056681-3056951,3057055-3057206,
3057419-3057631,3057791-3057959
Length = 357
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 376 GNRKRNPAPSLPKNLVYFCNTGPKRTTSKLFSQAI 480
GN + PAP + N +Y + G TS L SQ+I
Sbjct: 125 GNNDQLPAPDVLHNALYTIDIGQNDLTSNLGSQSI 159
>03_05_1047 + 29935929-29935974,29948868-29949709,29950162-29950350
Length = 358
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 823 FIDNARRSAEIYGLEIEN-MTAEDIKKRWNGIQ 728
F+D AR ++G E+ A+D++K W G+Q
Sbjct: 84 FLDTARHRRVLWGWANESDSAADDVRKGWAGVQ 116
>02_04_0347 +
22193708-22193720,22194317-22194390,22195388-22196132,
22196203-22196417,22196505-22196786,22196870-22196998,
22197088-22197267,22197538-22197645,22197888-22198094
Length = 650
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 886 LTKTKHLREVWSFEHG-SRGFEFIDNARRSAEIYGLEIENMTAEDIKK 746
L H++++ + G E IDNAR + E + + N T++ IKK
Sbjct: 119 LNTWNHMKQLTNISDGLPHANEAIDNARTAWENLTISVHNSTSKQIKK 166
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,767,721
Number of Sequences: 37544
Number of extensions: 481296
Number of successful extensions: 1267
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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