Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16p24f
         (746 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U25657-1|AAA83628.1|   80|Homo sapiens intestinal trefoil factor...    33   0.82 
L15203-1|AAA59981.1|   80|Homo sapiens secretory protein protein.      33   0.82 
L08044-1|AAA36766.1|   74|Homo sapiens intestinal trefoil factor...    33   0.82 
BC017859-1|AAH17859.1|   73|Homo sapiens TFF3 protein protein.         33   0.82 
AP001746-2|BAA95531.1|   73|Homo sapiens trefoil factor 3, HITF,...    33   0.82 
AB038162-3|BAB13731.1|   73|Homo sapiens trefoil factor 3 protein.     33   0.82 
X51698-1|CAA35995.1|  130|Homo sapiens spasmolytic polypeptide p...    30   7.7  
U47292-1|AAB05397.1|  129|Homo sapiens spasmolytic peptide protein.    30   7.7  
BC032820-1|AAH32820.1|  129|Homo sapiens trefoil factor 2 (spasm...    30   7.7  
AB038162-2|BAB13730.1|  129|Homo sapiens trefoil factor 2 protein.     30   7.7  

>U25657-1|AAA83628.1|   80|Homo sapiens intestinal trefoil factor
           protein.
          Length = 80

 Score = 33.5 bits (73), Expect = 0.82
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 351 GFSFGSCLVARTLRLPCGYANVNSEQCHPH-CCYDFR 458
           G S   C V    R+ CGY +V  ++C+   CC+D R
Sbjct: 26  GLSANQCAVPAKDRVDCGYPHVTPKECNNRGCCFDSR 62


>L15203-1|AAA59981.1|   80|Homo sapiens secretory protein protein.
          Length = 80

 Score = 33.5 bits (73), Expect = 0.82
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 351 GFSFGSCLVARTLRLPCGYANVNSEQCHPH-CCYDFR 458
           G S   C V    R+ CGY +V  ++C+   CC+D R
Sbjct: 26  GLSANQCAVPAKDRVDCGYPHVTPKECNNRGCCFDSR 62


>L08044-1|AAA36766.1|   74|Homo sapiens intestinal trefoil factor
           protein.
          Length = 74

 Score = 33.5 bits (73), Expect = 0.82
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 351 GFSFGSCLVARTLRLPCGYANVNSEQCHPH-CCYDFR 458
           G S   C V    R+ CGY +V  ++C+   CC+D R
Sbjct: 19  GLSANQCAVPAKDRVDCGYPHVTPKECNNRGCCFDSR 55


>BC017859-1|AAH17859.1|   73|Homo sapiens TFF3 protein protein.
          Length = 73

 Score = 33.5 bits (73), Expect = 0.82
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 351 GFSFGSCLVARTLRLPCGYANVNSEQCHPH-CCYDFR 458
           G S   C V    R+ CGY +V  ++C+   CC+D R
Sbjct: 19  GLSANQCAVPAKDRVDCGYPHVTPKECNNRGCCFDSR 55


>AP001746-2|BAA95531.1|   73|Homo sapiens trefoil factor 3, HITF,
           human intestinal trefoil factor protein.
          Length = 73

 Score = 33.5 bits (73), Expect = 0.82
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 351 GFSFGSCLVARTLRLPCGYANVNSEQCHPH-CCYDFR 458
           G S   C V    R+ CGY +V  ++C+   CC+D R
Sbjct: 19  GLSANQCAVPAKDRVDCGYPHVTPKECNNRGCCFDSR 55


>AB038162-3|BAB13731.1|   73|Homo sapiens trefoil factor 3 protein.
          Length = 73

 Score = 33.5 bits (73), Expect = 0.82
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 351 GFSFGSCLVARTLRLPCGYANVNSEQCHPH-CCYDFR 458
           G S   C V    R+ CGY +V  ++C+   CC+D R
Sbjct: 19  GLSANQCAVPAKDRVDCGYPHVTPKECNNRGCCFDSR 55


>X51698-1|CAA35995.1|  130|Homo sapiens spasmolytic polypeptide
           protein.
          Length = 130

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +3

Query: 390 RLPCGYANVNSEQCHPH-CCYDFRSKT----CFHRFPSRFS 497
           R  CG+  + S+QC  + CC+D  S T    CFH  P + S
Sbjct: 40  RTNCGFPGITSDQCFDNGCCFD-SSVTGVPWCFHPLPKQES 79


>U47292-1|AAB05397.1|  129|Homo sapiens spasmolytic peptide protein.
          Length = 129

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +3

Query: 390 RLPCGYANVNSEQCHPH-CCYDFRSKT----CFHRFPSRFS 497
           R  CG+  + S+QC  + CC+D  S T    CFH  P + S
Sbjct: 39  RTNCGFPGITSDQCFDNGCCFD-SSVTGVPWCFHPLPKQES 78


>BC032820-1|AAH32820.1|  129|Homo sapiens trefoil factor 2
           (spasmolytic protein 1) protein.
          Length = 129

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +3

Query: 390 RLPCGYANVNSEQCHPH-CCYDFRSKT----CFHRFPSRFS 497
           R  CG+  + S+QC  + CC+D  S T    CFH  P + S
Sbjct: 39  RTNCGFPGITSDQCFDNGCCFD-SSVTGVPWCFHPLPKQES 78


>AB038162-2|BAB13730.1|  129|Homo sapiens trefoil factor 2 protein.
          Length = 129

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +3

Query: 390 RLPCGYANVNSEQCHPH-CCYDFRSKT----CFHRFPSRFS 497
           R  CG+  + S+QC  + CC+D  S T    CFH  P + S
Sbjct: 39  RTNCGFPGITSDQCFDNGCCFD-SSVTGVPWCFHPLPKQES 78


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,119,458
Number of Sequences: 237096
Number of extensions: 1884777
Number of successful extensions: 3188
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3175
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)