Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16p20f
         (696 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061443-1|AAL28991.1|  197|Drosophila melanogaster LD38087p pro...   210   1e-54
AE014297-350|AAF51956.1|  197|Drosophila melanogaster CG10978-PB...   210   1e-54
AE014297-349|AAN14321.1|  197|Drosophila melanogaster CG10978-PA...   210   1e-54
AE014297-351|AAF51957.1|   91|Drosophila melanogaster CG10978-PC...    72   7e-13
BT011112-1|AAR82779.1| 2851|Drosophila melanogaster LD31436p pro...    31   2.0  
AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple ank...    31   2.0  
AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-P...    31   2.0  
AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-P...    31   2.0  
AE014296-2693|AAF49495.2|  199|Drosophila melanogaster CG13062-P...    31   2.0  
AY325814-1|AAP88969.1|  509|Drosophila melanogaster traffic jam ...    29   4.6  
AE014134-3104|AAF53804.2|  509|Drosophila melanogaster CG10034-P...    29   4.6  

>AY061443-1|AAL28991.1|  197|Drosophila melanogaster LD38087p
           protein.
          Length = 197

 Score =  210 bits (513), Expect = 1e-54
 Identities = 89/179 (49%), Positives = 116/179 (64%)
 Frame = +3

Query: 159 MASRGGVMVTGTNGADFEHREKVAIQYHISALNKSRLKYCVFFHHILFLGMMAKLSADVL 338
           MA+RGG MV GT+G DFE R++VA  Y IS LNKSRLKYC+FFH +LF  M+AKL++D+L
Sbjct: 1   MATRGGPMVAGTDGNDFEFRQRVAGTYQISLLNKSRLKYCIFFHALLFFVMLAKLTSDIL 60

Query: 339 DKLDIFILEVEELQIPPPLWWEYIWCXXXXXXXXXXXAIKRNNIRHLRQYVYGIVALGFC 518
           D LDIF+LE+EEL++PPPLWWEY+W            A + N +R +++Y+  I+     
Sbjct: 61  DHLDIFVLEIEELEVPPPLWWEYVWAASLLTSFLGLSAARGNKVREMQKYMVAILLFAIL 120

Query: 519 PLLYCVLYYCGDVWRYLXXXXXXXXXXXXXXLWQGYPYGLLWYAFVLLASQVHFFQLYF 695
           PL YC  YY  DVW +               +W+GYPYG+ WYAF  +  QVH F LYF
Sbjct: 121 PLFYCFAYYFSDVWEFATLDKSVELDETDIFVWRGYPYGVFWYAFCFVGFQVHGFTLYF 179


>AE014297-350|AAF51956.1|  197|Drosophila melanogaster CG10978-PB,
           isoform B protein.
          Length = 197

 Score =  210 bits (513), Expect = 1e-54
 Identities = 89/179 (49%), Positives = 116/179 (64%)
 Frame = +3

Query: 159 MASRGGVMVTGTNGADFEHREKVAIQYHISALNKSRLKYCVFFHHILFLGMMAKLSADVL 338
           MA+RGG MV GT+G DFE R++VA  Y IS LNKSRLKYC+FFH +LF  M+AKL++D+L
Sbjct: 1   MATRGGPMVAGTDGNDFEFRQRVAGTYQISLLNKSRLKYCIFFHALLFFVMLAKLTSDIL 60

Query: 339 DKLDIFILEVEELQIPPPLWWEYIWCXXXXXXXXXXXAIKRNNIRHLRQYVYGIVALGFC 518
           D LDIF+LE+EEL++PPPLWWEY+W            A + N +R +++Y+  I+     
Sbjct: 61  DHLDIFVLEIEELEVPPPLWWEYVWAASLLTSFLGLSAARGNKVREMQKYMVAILLFAIL 120

Query: 519 PLLYCVLYYCGDVWRYLXXXXXXXXXXXXXXLWQGYPYGLLWYAFVLLASQVHFFQLYF 695
           PL YC  YY  DVW +               +W+GYPYG+ WYAF  +  QVH F LYF
Sbjct: 121 PLFYCFAYYFSDVWEFATLDKSVELDETDIFVWRGYPYGVFWYAFCFVGFQVHGFTLYF 179


>AE014297-349|AAN14321.1|  197|Drosophila melanogaster CG10978-PA,
           isoform A protein.
          Length = 197

 Score =  210 bits (513), Expect = 1e-54
 Identities = 89/179 (49%), Positives = 116/179 (64%)
 Frame = +3

Query: 159 MASRGGVMVTGTNGADFEHREKVAIQYHISALNKSRLKYCVFFHHILFLGMMAKLSADVL 338
           MA+RGG MV GT+G DFE R++VA  Y IS LNKSRLKYC+FFH +LF  M+AKL++D+L
Sbjct: 1   MATRGGPMVAGTDGNDFEFRQRVAGTYQISLLNKSRLKYCIFFHALLFFVMLAKLTSDIL 60

Query: 339 DKLDIFILEVEELQIPPPLWWEYIWCXXXXXXXXXXXAIKRNNIRHLRQYVYGIVALGFC 518
           D LDIF+LE+EEL++PPPLWWEY+W            A + N +R +++Y+  I+     
Sbjct: 61  DHLDIFVLEIEELEVPPPLWWEYVWAASLLTSFLGLSAARGNKVREMQKYMVAILLFAIL 120

Query: 519 PLLYCVLYYCGDVWRYLXXXXXXXXXXXXXXLWQGYPYGLLWYAFVLLASQVHFFQLYF 695
           PL YC  YY  DVW +               +W+GYPYG+ WYAF  +  QVH F LYF
Sbjct: 121 PLFYCFAYYFSDVWEFATLDKSVELDETDIFVWRGYPYGVFWYAFCFVGFQVHGFTLYF 179


>AE014297-351|AAF51957.1|   91|Drosophila melanogaster CG10978-PC,
           isoform C protein.
          Length = 91

 Score = 72.1 bits (169), Expect = 7e-13
 Identities = 28/73 (38%), Positives = 38/73 (52%)
 Frame = +3

Query: 477 LRQYVYGIVALGFCPLLYCVLYYCGDVWRYLXXXXXXXXXXXXXXLWQGYPYGLLWYAFV 656
           +++Y+  I+     PL YC  YY  DVW +               +W+GYPYG+ WYAF 
Sbjct: 1   MQKYMVAILLFAILPLFYCFAYYFSDVWEFATLDKSVELDETDIFVWRGYPYGVFWYAFC 60

Query: 657 LLASQVHFFQLYF 695
            +  QVH F LYF
Sbjct: 61  FVGFQVHGFTLYF 73


>BT011112-1|AAR82779.1| 2851|Drosophila melanogaster LD31436p protein.
          Length = 2851

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
 Frame = -1

Query: 681  KNVLVMLIARRHTIIGHRGNP----ATVLYPPQNYHLHHHVTNISKHPHSSTIHSTITDR 514
            K V+    A++ T +G  G P    AT       +H HHH+ N S +  SS   ST T  
Sbjct: 2407 KEVVRKSSAQQTTAVGASGAPLPVTATSSATSVQHHPHHHLANSSSNSSSSLTTSTTTAA 2466

Query: 513  ILMP 502
              +P
Sbjct: 2467 SSVP 2470


>AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple ankyrin
            repeat singleKH domain protein protein.
          Length = 4001

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
 Frame = -1

Query: 681  KNVLVMLIARRHTIIGHRGNP----ATVLYPPQNYHLHHHVTNISKHPHSSTIHSTITDR 514
            K V+    A++ T +G  G P    AT       +H HHH+ N S +  SS   ST T  
Sbjct: 2971 KEVVRKSSAQQTTAVGASGAPLPVTATSSATSVQHHPHHHLANSSSNSSSSLTTSTTTAA 3030

Query: 513  ILMP 502
              +P
Sbjct: 3031 SSVP 3034


>AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-PB,
            isoform B protein.
          Length = 4001

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
 Frame = -1

Query: 681  KNVLVMLIARRHTIIGHRGNP----ATVLYPPQNYHLHHHVTNISKHPHSSTIHSTITDR 514
            K V+    A++ T +G  G P    AT       +H HHH+ N S +  SS   ST T  
Sbjct: 2971 KEVVRKSSAQQTTAVGASGAPLPVTATSSATSVQHHPHHHLANSSSNSSSSLTTSTTTAA 3030

Query: 513  ILMP 502
              +P
Sbjct: 3031 SSVP 3034


>AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-PA,
            isoform A protein.
          Length = 4001

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
 Frame = -1

Query: 681  KNVLVMLIARRHTIIGHRGNP----ATVLYPPQNYHLHHHVTNISKHPHSSTIHSTITDR 514
            K V+    A++ T +G  G P    AT       +H HHH+ N S +  SS   ST T  
Sbjct: 2971 KEVVRKSSAQQTTAVGASGAPLPVTATSSATSVQHHPHHHLANSSSNSSSSLTTSTTTAA 3030

Query: 513  ILMP 502
              +P
Sbjct: 3031 SSVP 3034


>AE014296-2693|AAF49495.2|  199|Drosophila melanogaster CG13062-PA
           protein.
          Length = 199

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -1

Query: 678 NVLVMLIARRHTIIGHRGNPATVLYPPQNYH---LHHHVTNISKHPHSSTIHSTITDRIL 508
           ++  +  AR   + GH  +   + Y P ++H   LH+H+     H  S+ +HS +   I+
Sbjct: 91  SICALTAARPGFLHGHHHHYPEIPYYPHHHHVEPLHYHLPAAVSHQSSTVVHS-VPHHII 149

Query: 507 MPL 499
            P+
Sbjct: 150 KPV 152


>AY325814-1|AAP88969.1|  509|Drosophila melanogaster traffic jam
           protein.
          Length = 509

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
 Frame = -1

Query: 663 LIARRHTIIGHRGNPATVLYPPQNY--HLHHHVTNISKHP---HSSTIHSTITDRILMPL 499
           L+  +H   GH G+P  V+     Y  H HHH  N+   P   HS++  S      L P 
Sbjct: 262 LMQAQHHPHGHGGHPHQVMLQQSKYPHHHHHHFHNLELTPINMHSNSYGS--ASGALTPT 319

Query: 498 C 496
           C
Sbjct: 320 C 320


>AE014134-3104|AAF53804.2|  509|Drosophila melanogaster CG10034-PA
           protein.
          Length = 509

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
 Frame = -1

Query: 663 LIARRHTIIGHRGNPATVLYPPQNY--HLHHHVTNISKHP---HSSTIHSTITDRILMPL 499
           L+  +H   GH G+P  V+     Y  H HHH  N+   P   HS++  S      L P 
Sbjct: 262 LMQAQHHPHGHGGHPHQVMLQQSKYPHHHHHHFHNLELTPINMHSNSYGS--ASGALTPT 319

Query: 498 C 496
           C
Sbjct: 320 C 320


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,537,609
Number of Sequences: 53049
Number of extensions: 652464
Number of successful extensions: 2094
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2071
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)