Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16p17f
(776 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces pombe... 63 5e-11
SPBP8B7.17c |||phosphomethylpyrimidine kinase|Schizosaccharomyce... 29 0.98
SPBC8D2.19 |mde3||serine/threonine protein kinase Mde3|Schizosac... 27 3.0
SPBC1703.07 |||ATP citrate synthase subunit 1 |Schizosaccharomyc... 26 5.2
SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyc... 26 5.2
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 26 5.2
SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces p... 26 6.9
SPCPB16A4.04c |trm8||tRNA |Schizosaccharomyces pombe|chr 3|||Manual 26 6.9
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 26 6.9
SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 9.2
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 25 9.2
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 25 9.2
SPBC1A4.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.2
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 25 9.2
>SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 882
Score = 62.9 bits (146), Expect = 5e-11
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Frame = +2
Query: 395 ELLLINLAQPIAAGNYTV-TVRYRGQINTNPVDRGFYRGYYYVNN-QLRYYATTQFQPFH 568
E +++ + A + V T+ + +I++ GFYR Y ++ +Y ATTQ +P
Sbjct: 90 ERIVLQFPSTVPANSVAVLTLPFTARISSGM--EGFYRSSYVDSDGNTKYLATTQMEPTS 147
Query: 569 ARKAFPCFDEPQFKSIYIISITRDRSLSPTYSNMPISNTENPLLPTASKRRSSQLPSSLL 748
AR+AFPC+DEP K+ + I IT + + + + T L TA + ++ + LL
Sbjct: 148 ARRAFPCWDEPALKATFTIDITAKENYTILSNMNAVEETVKDGLKTARFAETCRMSTYLL 207
Query: 749 TWV 757
W+
Sbjct: 208 AWI 210
>SPBP8B7.17c |||phosphomethylpyrimidine kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 506
Score = 28.7 bits (61), Expect = 0.98
Identities = 18/73 (24%), Positives = 37/73 (50%)
Frame = -2
Query: 595 VEAREGLPSMEWLELCGSIISELIVDVIVTSVKTSINRIGIDLTAIPHCDGVITSSDWLG 416
+ A +G P + W+E C + ++ ++ S++T N I L+ + H G++ S
Sbjct: 434 ISASDGYPYVAWVEHCKDKSATSHIETLLESLET--NSQIISLSKVQHLLGILEKS---- 487
Query: 415 EVDQQELVMSVNS 377
+D + LV+ +S
Sbjct: 488 -LDFERLVLDTSS 499
>SPBC8D2.19 |mde3||serine/threonine protein kinase
Mde3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 559
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 694 PSTNRVKETFFPTPIVSSYLGSVPRK 771
P+ KE FFP P +S SVP+K
Sbjct: 313 PTAKYCKEVFFPLPPSASKSNSVPQK 338
>SPBC1703.07 |||ATP citrate synthase subunit 1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 615
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 611 SIYIISITRDRSLSPTYSNMPIS 679
S +I +I+ DR TY+N+PIS
Sbjct: 358 SSFICTISNDRGSELTYNNVPIS 380
>SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -2
Query: 523 VDVIVTSVKTSINRIGIDLTAIPHCDGVITSSD 425
++V + ++K R+G +TA+ + DGVI ++D
Sbjct: 9 MNVDINAIKKGEIRMGTTITALRYKDGVILAAD 41
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 26.2 bits (55), Expect = 5.2
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 522 TISSDIMLP-HNSSHSMLGRPSRASTSPSLNQYTSFQSP 635
T SS I +P N+ HS L P R S S++ +SP
Sbjct: 137 TSSSSIPIPIKNAGHSNLDHPIRPSLQSSISSNRIIKSP 175
>SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 612
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 539 YATTQFQPFHARKAFPCFDEPQFK 610
Y ++ Q HAR PC D P K
Sbjct: 132 YVFSECQAIHARSFIPCQDTPSVK 155
>SPCPB16A4.04c |trm8||tRNA |Schizosaccharomyces pombe|chr 3|||Manual
Length = 273
Score = 25.8 bits (54), Expect = 6.9
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +2
Query: 350 VGLKFPDPFTIDRHYELLLIN-LAQPIAAGNYTVTVRYRGQINTNPVDRGFYRGYYYVNN 526
+G +FPD + + + + L + I A +RYR + PV G Y+ +
Sbjct: 98 LGPQFPDTLVLGMEIRMQVSDYLKEKIQA------LRYRAD-HEEPVPGG-YKNISVLRM 149
Query: 527 QLRYYATTQFQPFHARKAFPCFDEPQFKS 613
+ + F+ K F CF +P FK+
Sbjct: 150 NCQKFLPNFFEKGQLSKMFFCFPDPHFKA 178
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +2
Query: 551 QFQPFHARKAFPCFDEPQFKSIYIISITRDRSLSPTYSNMPISNTENPLLP 703
QF + A + F + FK+++++S D +SP ++++ + L P
Sbjct: 287 QFSEYVADRIRKSFPDVSFKNLHVLSCMEDSVMSPFRELGSVTSSMSSLSP 337
>SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 313
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 650 SPTYSNMPISNTENPLLPTASKRRSSQLPSSLLT 751
SP+ +P S++ PLLP SS +P SLL+
Sbjct: 119 SPSTPELPPSSS--PLLPPNGSESSSPIPLSLLS 150
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = +2
Query: 116 LEWMDYSTNVAESA---YRLLDTIQPRTMRVDLDV 211
LEW+DY +++A Y + T P DLD+
Sbjct: 187 LEWLDYKVGTSDNAPGNYVAVGTFDPEIEIWDLDI 221
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 612 QYTSFQSPETGALVRHTRTCLYLTQKTPFYQPR 710
QYT F P+ V+ T Q+T F QP+
Sbjct: 336 QYTGFVQPQHTGFVQPQATGFMQPQRTGFVQPQ 368
>SPBC1A4.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 249
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +2
Query: 596 EPQFKSIYIISITRDRSLSPTYSNMPISNTENPLLPTASK 715
E F ++ I +D P YSN+P+ EN P K
Sbjct: 199 EKTFGTLDSIGTEQDDCFDPDYSNLPLFPQENASPPLFRK 238
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 442 VITSSDWLGEVDQQELVMSVNSERIREF 359
V ++ ++ GE D VMSVNSE + F
Sbjct: 450 VFSAPNYCGEFDNWGAVMSVNSELLCSF 477
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,400,411
Number of Sequences: 5004
Number of extensions: 75156
Number of successful extensions: 247
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 375345278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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