Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16p17f
(776 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 76 2e-14
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 76 2e-14
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr... 58 5e-09
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ... 54 2e-07
Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical... 50 1e-06
Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical... 42 6e-04
U61944-6|ABP49529.1| 529|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF036701-2|AAB88369.2| 625|Caenorhabditis elegans Hypothetical ... 33 0.17
CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical... 33 0.30
AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidas... 33 0.30
AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidas... 33 0.30
BX677430-1|CAI79176.1| 340|Caenorhabditis elegans Hypothetical ... 32 0.53
Z77662-6|CAB01195.1| 210|Caenorhabditis elegans Hypothetical pr... 31 0.92
U41546-6|AAC48223.1| 798|Caenorhabditis elegans Hypothetical pr... 29 2.8
CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical... 29 2.8
Z75711-4|CAB00030.1| 134|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z69664-5|CAE17882.2| 360|Caenorhabditis elegans Hypothetical pr... 29 4.9
AC024211-6|AAF36067.2| 1454|Caenorhabditis elegans Hypothetical ... 29 4.9
U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical pr... 28 6.5
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 28 6.5
L23646-14|AAN84801.2| 517|Caenorhabditis elegans C. elegans RET... 28 6.5
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 28 6.5
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 28 6.5
DQ482733-1|ABF20556.1| 600|Caenorhabditis elegans SNF-3 protein. 28 6.5
DQ118731-1|AAZ23105.1| 600|Caenorhabditis elegans sodium-couple... 28 6.5
AF026211-1|AAB71293.2| 600|Caenorhabditis elegans Sodium:neurot... 28 6.5
Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical pr... 28 8.6
AC024765-5|AAF60527.3| 975|Caenorhabditis elegans Hypothetical ... 28 8.6
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 76.2 bits (179), Expect = 2e-14
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 1/190 (0%)
Frame = +2
Query: 161 RLLDTIQPRTMRVDLDVFLNEARFDGIVSMDIEVLASNIEQIVFHQNVVSIQGVNLVTAR 340
RL +P V L LN+ FDG ++D+ + + + + H + IQ V+L+T
Sbjct: 15 RLPTFAEPTHYNVRLSPCLNQFSFDGHATIDVTIKEAT-DVLKVHAQSLLIQSVSLITQP 73
Query: 341 GDPVGLKFPDPFTIDRHYELLLINLAQPIAAGNYTVTVRYRGQINTNPVDRGFYRGYYYV 520
GD K + + D +L I L + + ++ G++N RGFYR Y
Sbjct: 74 GD--ASKSLET-SYDDKLNILTIKLPTTMQPQKVQLDFKFVGELNDKM--RGFYRSQYKD 128
Query: 521 NNQL-RYYATTQFQPFHARKAFPCFDEPQFKSIYIISITRDRSLSPTYSNMPISNTENPL 697
N ++ A+TQF+ +AR AFPCFDEP +K+ + +++ + L+ + IS T
Sbjct: 129 KNGTEKFLASTQFESTYARYAFPCFDEPIYKATFDVTLEVENHLTALSNMNVISET---- 184
Query: 698 LPTASKRRSS 727
PTA +R +
Sbjct: 185 -PTADGKRKA 193
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 76.2 bits (179), Expect = 2e-14
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 1/190 (0%)
Frame = +2
Query: 161 RLLDTIQPRTMRVDLDVFLNEARFDGIVSMDIEVLASNIEQIVFHQNVVSIQGVNLVTAR 340
RL +P V L LN+ FDG ++D+ + + + + H + IQ V+L+T
Sbjct: 79 RLPTFAEPTHYNVRLSPCLNQFSFDGHATIDVTIKEAT-DVLKVHAQSLLIQSVSLITQP 137
Query: 341 GDPVGLKFPDPFTIDRHYELLLINLAQPIAAGNYTVTVRYRGQINTNPVDRGFYRGYYYV 520
GD K + + D +L I L + + ++ G++N RGFYR Y
Sbjct: 138 GD--ASKSLET-SYDDKLNILTIKLPTTMQPQKVQLDFKFVGELNDKM--RGFYRSQYKD 192
Query: 521 NNQL-RYYATTQFQPFHARKAFPCFDEPQFKSIYIISITRDRSLSPTYSNMPISNTENPL 697
N ++ A+TQF+ +AR AFPCFDEP +K+ + +++ + L+ + IS T
Sbjct: 193 KNGTEKFLASTQFESTYARYAFPCFDEPIYKATFDVTLEVENHLTALSNMNVISET---- 248
Query: 698 LPTASKRRSS 727
PTA +R +
Sbjct: 249 -PTADGKRKA 257
>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical
protein T16G12.1 protein.
Length = 1890
Score = 58.4 bits (135), Expect = 5e-09
Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
Frame = +2
Query: 230 FDGIVSMDIEVLASNIEQIVFHQNVVSIQGVNLVTARGDPVGLKFPDPFTIDRHYELLLI 409
FDG S+ +E L ++ ++ + + IQ +V G V + D +L LI
Sbjct: 113 FDGRASIQVEALVAS-DRFILNAYNFKIQSYKVVDIDGTVVPINSISQD--DTTQQLSLI 169
Query: 410 NLAQPIAAGN-YTVTVRYRGQINTNPVDRGFYRGYYYVNNQLRYYATTQFQPFHARKAFP 586
A + AG Y + Y G IN +Y Y Y T +PF ARK FP
Sbjct: 170 TNANGVVAGQIYNIEFVYTGIINPYTDGGVYYTSYNDPQGNTHYMIATHMEPFSARKVFP 229
Query: 587 CFDEPQFKSIYIISI 631
DEP +K+ + I++
Sbjct: 230 SLDEPSYKAKFTITV 244
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Frame = +2
Query: 440 YTVTVRYRGQINTNPVDRGFYRGYYY--VNNQLRYYATTQFQPFH-ARKAFPCFDEPQFK 610
Y++ + Y G I NP D G Y +NN+ + TT F+ AR PC+DEP +K
Sbjct: 1103 YSLFIEYTGFIFQNP-DEGDASNTYLGGLNNRKGWIFTTDFEGGPGARSLLPCWDEPSYK 1161
Query: 611 SIYIISITRDRSLSPTYSNMPISNTENPLLPTASK-RRSSQLPSSLLTWVAFHVSD 775
+ +S+ + + + I T T +K ++Q+ + LL H S+
Sbjct: 1162 GQFEVSVFHPTDMIALSNEVDIQRTIYDNGWTTTKFATTNQMSTYLLALCVGHFSN 1217
>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
protein Y42A5A.1 protein.
Length = 1045
Score = 53.6 bits (123), Expect = 2e-07
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Frame = +2
Query: 380 IDRHYELLL-INLAQPIAAG-NYTVTVRYRGQINTNPVDRGFYRGYYYVNNQLRYYATTQ 553
+ R Y +L +NL + G NYT+ V ++ IN N + G + Y N+ RY TQ
Sbjct: 229 VGRQYSQILDLNLETDMIHGMNYTLDVAFKSAINLN-LAYGLFAAPYTFENETRYVVATQ 287
Query: 554 FQPFHARKAFPCFDEPQFKSIYIISITRDRSLSPTYSNMPISNTENPLLPTASKRRSSQL 733
Q AR FPC D P K+ + I + + M S + T + R+ +
Sbjct: 288 LQISEARTVFPCIDVPDMKAQFDTVIIHPTGTTSIANMMENSTKVDGEWTTTTFHRTPPM 347
Query: 734 PSSLLTWVAFHVSD 775
+ L AF VSD
Sbjct: 348 STYLF---AFSVSD 358
>Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 50.4 bits (115), Expect = 1e-06
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 3/171 (1%)
Frame = +2
Query: 137 TNVAESAYRLLDTIQPRTMRVDLDVFLNEARFDGIV--SMDIEVLASNIEQIVFHQNVVS 310
TN+ + RL T +P +D D+ L+ +G V S+ I +L N +++ +++
Sbjct: 191 TNITWYSSRLPRTAEP----IDYDLTLHPNLTNGEVEASVSIRILIKNDTKLL----ILN 242
Query: 311 IQGVNLVTARGDPVGLKFPDPFTIDRHYELLLINLAQPIAAGNYTV-TVRYRGQINTNPV 487
+ + + + G K F LA+ + G++ V T+ Y Q+ ++ +
Sbjct: 243 AENLEMKSFDITKKGAKVKADFVKCAVMTQWAWKLAKRLHKGDHIVLTIYYSAQMKSD-L 301
Query: 488 DRGFYRGYYYVNNQLRYYATTQFQPFHARKAFPCFDEPQFKSIYIISITRD 640
++ + + + A TQF+P ARK PCFDEP FK+ + ++I R+
Sbjct: 302 QGLYFSTHLGTDGKKTKSAATQFEPTFARKMLPCFDEPNFKATFQVAIIRN 352
>AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 50.4 bits (115), Expect = 1e-06
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 3/171 (1%)
Frame = +2
Query: 137 TNVAESAYRLLDTIQPRTMRVDLDVFLNEARFDGIV--SMDIEVLASNIEQIVFHQNVVS 310
TN+ + RL T +P +D D+ L+ +G V S+ I +L N +++ +++
Sbjct: 191 TNITWYSSRLPRTAEP----IDYDLTLHPNLTNGEVEASVSIRILIKNDTKLL----ILN 242
Query: 311 IQGVNLVTARGDPVGLKFPDPFTIDRHYELLLINLAQPIAAGNYTV-TVRYRGQINTNPV 487
+ + + + G K F LA+ + G++ V T+ Y Q+ ++ +
Sbjct: 243 AENLEMKSFDITKKGAKVKADFVKCAVMTQWAWKLAKRLHKGDHIVLTIYYSAQMKSD-L 301
Query: 488 DRGFYRGYYYVNNQLRYYATTQFQPFHARKAFPCFDEPQFKSIYIISITRD 640
++ + + + A TQF+P ARK PCFDEP FK+ + ++I R+
Sbjct: 302 QGLYFSTHLGTDGKKTKSAATQFEPTFARKMLPCFDEPNFKATFQVAIIRN 352
>Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical
protein R03G8.4 protein.
Length = 786
Score = 48.4 bits (110), Expect = 6e-06
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 494 GFYRGYYY-VNNQLRYYATTQFQPFHARKAFPCFDEPQFKSIYIISITRDRSLSPTYSNM 670
G+YR +N Y A TQF+P AR PCFDEP+FK+I+ +++ + +
Sbjct: 142 GYYRTISPGLNETTMYNAVTQFEPTAARFMVPCFDEPEFKAIWHVTVVHPTGSTALSNAK 201
Query: 671 PISNTE 688
I NT+
Sbjct: 202 EIDNTK 207
>Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical
protein T07F10.1b protein.
Length = 976
Score = 44.0 bits (99), Expect = 1e-04
Identities = 41/196 (20%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Frame = +2
Query: 92 PMDELRS-NLEWMDYSTNVAESAYRLLDTIQPRTMRVDLDVFL---------NEARFDGI 241
P DE+ S N+ N++ S RL ++ P + ++ + +L N F+G
Sbjct: 49 PHDEIESENVPAAKPEDNISASELRLPTSVSPISYQLTVKTYLPGYGYTADKNNLTFEGQ 108
Query: 242 VSMDIEVLASNIEQIVFHQNVVSIQGVNL----VTARGDPVGLKFPDPFTIDRHYELLLI 409
V +++ + S I+++ + ++ + + G + D + +E +
Sbjct: 109 VLIELNITKS-IKKVSLNSKDLNYTEEFIKKSSILVNGKSIAFTLDDKQST---HEKIFF 164
Query: 410 NLAQPIA-AGNYTVTVRYRGQINTNPVDRGFYRGYYYVNN-QLRYYATTQFQPFHARKAF 583
NL + + + T+ V + + T+ G Y+ Y + + + A TQ +P +AR+
Sbjct: 165 NLDETVEPTTSATLKVAFGAPLRTDM--SGLYQTTYTNSKGESKMAAVTQMEPVYARRMV 222
Query: 584 PCFDEPQFKSIYIISI 631
PCFDEP +K+ + +++
Sbjct: 223 PCFDEPAYKATWTVTV 238
>Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical
protein T07F10.1a protein.
Length = 988
Score = 44.0 bits (99), Expect = 1e-04
Identities = 41/196 (20%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Frame = +2
Query: 92 PMDELRS-NLEWMDYSTNVAESAYRLLDTIQPRTMRVDLDVFL---------NEARFDGI 241
P DE+ S N+ N++ S RL ++ P + ++ + +L N F+G
Sbjct: 61 PHDEIESENVPAAKPEDNISASELRLPTSVSPISYQLTVKTYLPGYGYTADKNNLTFEGQ 120
Query: 242 VSMDIEVLASNIEQIVFHQNVVSIQGVNL----VTARGDPVGLKFPDPFTIDRHYELLLI 409
V +++ + S I+++ + ++ + + G + D + +E +
Sbjct: 121 VLIELNITKS-IKKVSLNSKDLNYTEEFIKKSSILVNGKSIAFTLDDKQST---HEKIFF 176
Query: 410 NLAQPIA-AGNYTVTVRYRGQINTNPVDRGFYRGYYYVNN-QLRYYATTQFQPFHARKAF 583
NL + + + T+ V + + T+ G Y+ Y + + + A TQ +P +AR+
Sbjct: 177 NLDETVEPTTSATLKVAFGAPLRTDM--SGLYQTTYTNSKGESKMAAVTQMEPVYARRMV 234
Query: 584 PCFDEPQFKSIYIISI 631
PCFDEP +K+ + +++
Sbjct: 235 PCFDEPAYKATWTVTV 250
>Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical
protein R03G8.6 protein.
Length = 747
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/178 (17%), Positives = 81/178 (45%), Gaps = 1/178 (0%)
Frame = +2
Query: 218 NEARFDGIVSMDIEVLASNIEQIVFHQNVVSIQGVNLVTARGDPVGLKFPDPFTIDRHYE 397
N+ F+G V++ +++ + +++V H + ++I T + D + + + +
Sbjct: 59 NKITFEGNVNILLDIKETT-DKLVLHSSSLNIISA---TFQSDEQNVSISH-WNVQTESQ 113
Query: 398 LLLINLAQPIAAGNYT-VTVRYRGQINTNPVDRGFYRGYYYVNNQLRYYATTQFQPFHAR 574
L L + + + + ++G++ T+ + F + + TQF+ AR
Sbjct: 114 FLTFYLNNTVKVQSSAGIQINFQGKVRTDGLGL-FATNSTREDGTVMTNFATQFETIFAR 172
Query: 575 KAFPCFDEPQFKSIYIISITRDRSLSPTYSNMPISNTENPLLPTASKRRSSQLPSSLL 748
PCFDEP+FK+ + +S+ + + + + + N T + +++ ++ S +L
Sbjct: 173 NMIPCFDEPEFKATWNVSLEHPTGSTALSNGIEVESKVNDDWKTTTYKKTLKMSSYIL 230
>AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical
protein Y67D8C.9 protein.
Length = 1073
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 545 TTQFQPFHARKAFPCFDEPQFKSIYIISITRDRSLSPTYSNMP 673
TT+F+P AR FPC+DEP K+ + IS+ ++ + SNMP
Sbjct: 239 TTKFEPTLARAFFPCWDEPGVKATFNISVRHNKKYT-VLSNMP 280
>U61944-6|ABP49529.1| 529|Caenorhabditis elegans Hypothetical
protein T12E12.6 protein.
Length = 529
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 524 NQLRYYATTQFQPFHARKAFPCFDEPQFKSIYIISI 631
N L Y TT QP HAR+ FPC D P K+++ +SI
Sbjct: 18 NPLLY--TTHLQPNHARRLFPCIDHPAVKALFRLSI 51
>AF036701-2|AAB88369.2| 625|Caenorhabditis elegans Hypothetical
protein ZC416.6 protein.
Length = 625
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +2
Query: 539 YATTQFQPFHARKAFPCFDEPQFKSIYIISIT 634
Y +Q Q HAR PC D P KS Y +T
Sbjct: 137 YLFSQCQAIHARSIVPCMDTPSVKSTYEAEVT 168
>CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical
protein C42C1.11a protein.
Length = 609
Score = 32.7 bits (71), Expect = 0.30
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 5/183 (2%)
Frame = +2
Query: 236 GIVSMDIEVLASNIEQIVFHQNVVSIQGVNLVTARGDPVGLKFPDPFTIDRHYEL--LLI 409
G VS+ ++V + E+IV +S+Q V L G+P F T++ + L L+
Sbjct: 38 GDVSITLDV-KQDTERIVLDTRDLSVQSVAL-NLNGEPKKAGF----TLEDNQALGQKLV 91
Query: 410 NLAQPIAAGNYTVT-VRYRGQINTNPVDRGFYRGYYYVNNQLRYYATTQFQPFHARKAFP 586
+ + +G+ V ++Y N + + +++ Y +Q Q +AR P
Sbjct: 92 ITTESLKSGDRPVLEIKYESSNNAAALQ---FLTAEQTTDRVAPYLFSQCQAINARSIVP 148
Query: 587 CFDEPQFKSIYIISITRDRSLSPTYSNMPISNT--ENPLLPTASKRRSSQLPSSLLTWVA 760
C D P KS Y + L+ S + +T E S ++ +PS LL V
Sbjct: 149 CMDTPSVKSTYEAEVCVPIGLTCLMSAIGQGSTPSECGKRTIFSFKQPVSIPSYLLAIVV 208
Query: 761 FHV 769
H+
Sbjct: 209 GHL 211
>AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 32.7 bits (71), Expect = 0.30
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 5/183 (2%)
Frame = +2
Query: 236 GIVSMDIEVLASNIEQIVFHQNVVSIQGVNLVTARGDPVGLKFPDPFTIDRHYEL--LLI 409
G VS+ ++V + E+IV +S+Q V L G+P F T++ + L L+
Sbjct: 38 GDVSITLDV-KQDTERIVLDTRDLSVQSVAL-NLNGEPKKAGF----TLEDNQALGQKLV 91
Query: 410 NLAQPIAAGNYTVT-VRYRGQINTNPVDRGFYRGYYYVNNQLRYYATTQFQPFHARKAFP 586
+ + +G+ V ++Y N + + +++ Y +Q Q +AR P
Sbjct: 92 ITTESLKSGDRPVLEIKYESSNNAAALQ---FLTAEQTTDRVAPYLFSQCQAINARSIVP 148
Query: 587 CFDEPQFKSIYIISITRDRSLSPTYSNMPISNT--ENPLLPTASKRRSSQLPSSLLTWVA 760
C D P KS Y + L+ S + +T E S ++ +PS LL V
Sbjct: 149 CMDTPSVKSTYEAEVCVPIGLTCLMSAIGQGSTPSECGKRTIFSFKQPVSIPSYLLAIVV 208
Query: 761 FHV 769
H+
Sbjct: 209 GHL 211
>AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 32.7 bits (71), Expect = 0.30
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 5/183 (2%)
Frame = +2
Query: 236 GIVSMDIEVLASNIEQIVFHQNVVSIQGVNLVTARGDPVGLKFPDPFTIDRHYEL--LLI 409
G VS+ ++V + E+IV +S+Q V L G+P F T++ + L L+
Sbjct: 38 GDVSITLDV-KQDTERIVLDTRDLSVQSVAL-NLNGEPKKAGF----TLEDNQALGQKLV 91
Query: 410 NLAQPIAAGNYTVT-VRYRGQINTNPVDRGFYRGYYYVNNQLRYYATTQFQPFHARKAFP 586
+ + +G+ V ++Y N + + +++ Y +Q Q +AR P
Sbjct: 92 ITTESLKSGDRPVLEIKYESSNNAAALQ---FLTAEQTTDRVAPYLFSQCQAINARSIVP 148
Query: 587 CFDEPQFKSIYIISITRDRSLSPTYSNMPISNT--ENPLLPTASKRRSSQLPSSLLTWVA 760
C D P KS Y + L+ S + +T E S ++ +PS LL V
Sbjct: 149 CMDTPSVKSTYEAEVCVPIGLTCLMSAIGQGSTPSECGKRTIFSFKQPVSIPSYLLAIVV 208
Query: 761 FHV 769
H+
Sbjct: 209 GHL 211
>BX677430-1|CAI79176.1| 340|Caenorhabditis elegans Hypothetical
protein VB0395L.1 protein.
Length = 340
Score = 31.9 bits (69), Expect = 0.53
Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Frame = +2
Query: 245 SMDIEVLASNI-EQIVFHQN-VVSIQGVNLVTARGDPVGLKFPDPFTIDRHYEL-LLINL 415
S+ ++ +A +I +Q+ FH++ V I ++L A G + P D+ + I L
Sbjct: 83 SLQMDFVARDITQQLFFHRSDKVKINSISLEDANGT---MTAPTAGAYDKSTGVQAYIPL 139
Query: 416 AQPIAAGNYTVTVRYRGQINTNPVDRGFYRGYYYV--NNQLRY---YATTQFQPFHARKA 580
A + +Y + + ++G++++ + G R Y N +RY + + R
Sbjct: 140 ANLTSQESYVLRIDFQGELDS---ETGSPRNLQYSLPNGTIRYSIVFGNSVTSSSGLRYL 196
Query: 581 FPCFDEPQFKSIYIISI 631
PC D P F +++ +I
Sbjct: 197 MPCLDSPDFPAVFNFNI 213
>Z77662-6|CAB01195.1| 210|Caenorhabditis elegans Hypothetical
protein F47B8.6 protein.
Length = 210
Score = 31.1 bits (67), Expect = 0.92
Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 9/170 (5%)
Frame = +2
Query: 164 LLDTIQPRTMRVDLDVFLNEARFDGIVSMDIEVLASNIEQIVFHQNVVSIQGVNLVTA-- 337
LL T +P + + LD L ++G V +D E E + V L T
Sbjct: 4 LLTTYRPIKILLQLDPNLGNNSYNGRVKIDYEFTGETSEIKIQTSRDFQWTSVRLATFYD 63
Query: 338 --RGDPVGLKFP-DPFTIDRHYELLLINLAQPIAA----GNYTVTVRYRGQINTNPVDRG 496
G PV + + D E+L + L P+ + + + + G IN +G
Sbjct: 64 FNEGCPVYASVDCENYVHDAESEILTLPLGNPLTPETTENGFYIELEWTGPINP----QG 119
Query: 497 FYRGYYYVNNQLRYYATTQFQPFHARKAFPCFDEPQFKSIYIISITRDRS 646
G Y ++ + +A K FPC++ ++ IT +R+
Sbjct: 120 ETTGLYAIDEST---IEANMKDGNAHKVFPCYEGGVSAKFWLTVITDERT 166
>U41546-6|AAC48223.1| 798|Caenorhabditis elegans Hypothetical
protein T25B6.2 protein.
Length = 798
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/57 (24%), Positives = 32/57 (56%)
Frame = +3
Query: 456 GIAVKSIPILLIEVFTEVTITSTISSDIMLPHNSSHSMLGRPSRASTSPSLNQYTSF 626
GIA+ S+ + +I + T+T+T++++ + + + + P +TSPS Q ++
Sbjct: 18 GIAIGSLVLNIIILGNVNTLTTTVNNNPVYHYTPAPQVNSTPGTVNTSPSYTQAANY 74
>CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical
protein C42C1.11c protein.
Length = 608
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +2
Query: 539 YATTQFQPFHARKAFPCFDEPQFKSIYIISITRDRSLSPTYSNMPISNT--ENPLLPTAS 712
Y +Q Q +AR PC D P KS Y + L+ S + +T E S
Sbjct: 132 YLFSQCQAINARSIVPCMDTPSVKSTYEAEVCVPIGLTCLMSAIGQGSTPSECGKRTIFS 191
Query: 713 KRRSSQLPSSLLTWVAFHV 769
++ +PS LL V H+
Sbjct: 192 FKQPVSIPSYLLAIVVGHL 210
>Z75711-4|CAB00030.1| 134|Caenorhabditis elegans Hypothetical
protein K02B12.6 protein.
Length = 134
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +2
Query: 383 DRHYELLLINLAQPIAAGNYTVTVRYRGQINTNPVDRGFYRGYYYVNNQLRYYATTQFQP 562
D HYE N PIA+ ++ +Y G N Y YY ++Q YY +
Sbjct: 66 DSHYEP---NYYNPIASYYHSYMPKYHGGHNDYYTKYNQYTPYYGGSHQQNYYEQPKHDD 122
Query: 563 FH 568
+H
Sbjct: 123 YH 124
>Z69664-5|CAE17882.2| 360|Caenorhabditis elegans Hypothetical
protein K04D7.6 protein.
Length = 360
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 180 WIVSRSR*ADSATLVL*SIHSRLDLSSSMGTARPVPIRIHSTVGSSIVPIA-RSSPPHDQ 4
W +S++ AT+++ + +SS + RP+PI S++ S +PI R P H +
Sbjct: 278 WSISKTTTTAEATIIV------TEPTSSSSSNRPIPIVSQSSIPESSIPIPNRIDPEHQE 331
>AC024211-6|AAF36067.2| 1454|Caenorhabditis elegans Hypothetical
protein Y76B12C.7 protein.
Length = 1454
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +2
Query: 260 VLASNIEQIVFHQNVVSIQGVNLVTARGDPVGLKFPDPFTIDRHYELLLINLAQPIAAGN 439
V +I + FH+N I + + DP D +D +YE ++ L +PI
Sbjct: 155 VYGKHIAILPFHENSKRIHSYVIPLKQIDPRLDNIADMVFLDGYYEPTILFLYEPIQTTP 214
Query: 440 YTVTVRYRGQ----INTNPVDRGF 499
VRY ++ N VDR F
Sbjct: 215 GRACVRYDTMCIMGVSVNIVDRQF 238
>U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical
protein K09H11.3 protein.
Length = 1085
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +2
Query: 620 IISITRDRSLSPTYSNMPIS---NTENPL-LPTASKRRSSQLPSSLLTWV 757
++S+TR SLS S +S TE+PL P+ +R SS L S LL V
Sbjct: 716 VVSVTRTPSLSRRRSRAHLSYSKATESPLDKPSEVRRESSSLMSPLLKHV 765
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = -3
Query: 333 VTKFTPWIETTFWWNTICSMLLARTSISMLTIPSNLASFKKTSRSTLIVLGWIVSRSR*A 154
V FT +E WN + + + T I ++ SN+ + + L+ I+ + R
Sbjct: 2110 VIPFTIDVELVDCWNRLIAKISEETKILVV---SNMTPDELEDHALLVEFTSILQKCRRV 2166
Query: 153 DSATLVL*SIHSRLD 109
D L + S+H RL+
Sbjct: 2167 DDGYLEIISLHDRLE 2181
>L23646-14|AAN84801.2| 517|Caenorhabditis elegans C. elegans RETR-1
protein, isoformc protein.
Length = 517
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = -3
Query: 333 VTKFTPWIETTFWWNTICSMLLARTSISMLTIPSNLASFKKTSRSTLIVLGWIVSRSR*A 154
V FT +E WN + + + T I ++ SN+ + + L+ I+ + R
Sbjct: 355 VIPFTIDVELVDCWNRLIAKISEETKILVV---SNMTPDELEDHALLVEFTSILQKCRRV 411
Query: 153 DSATLVL*SIHSRLD 109
D L + S+H RL+
Sbjct: 412 DDGYLEIISLHDRLE 426
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = -3
Query: 333 VTKFTPWIETTFWWNTICSMLLARTSISMLTIPSNLASFKKTSRSTLIVLGWIVSRSR*A 154
V FT +E WN + + + T I ++ SN+ + + L+ I+ + R
Sbjct: 2013 VIPFTIDVELVDCWNRLIAKISEETKILVV---SNMTPDELEDHALLVEFTSILQKCRRV 2069
Query: 153 DSATLVL*SIHSRLD 109
D L + S+H RL+
Sbjct: 2070 DDGYLEIISLHDRLE 2084
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = -3
Query: 333 VTKFTPWIETTFWWNTICSMLLARTSISMLTIPSNLASFKKTSRSTLIVLGWIVSRSR*A 154
V FT +E WN + + + T I ++ SN+ + + L+ I+ + R
Sbjct: 2024 VIPFTIDVELVDCWNRLIAKISEETKILVV---SNMTPDELEDHALLVEFTSILQKCRRV 2080
Query: 153 DSATLVL*SIHSRLD 109
D L + S+H RL+
Sbjct: 2081 DDGYLEIISLHDRLE 2095
>DQ482733-1|ABF20556.1| 600|Caenorhabditis elegans SNF-3 protein.
Length = 600
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 735 GSWEERLFDAVGRRGFSVLDIGMFEYVGL 649
GS LFDA G G+++L + FE VGL
Sbjct: 440 GSHWLTLFDAYGASGYALLFVVFFEVVGL 468
>DQ118731-1|AAZ23105.1| 600|Caenorhabditis elegans sodium-coupled
betaine transporterprotein protein.
Length = 600
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 735 GSWEERLFDAVGRRGFSVLDIGMFEYVGL 649
GS LFDA G G+++L + FE VGL
Sbjct: 440 GSHWLTLFDAYGASGYALLFVVFFEVVGL 468
>AF026211-1|AAB71293.2| 600|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 3
protein.
Length = 600
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 735 GSWEERLFDAVGRRGFSVLDIGMFEYVGL 649
GS LFDA G G+++L + FE VGL
Sbjct: 440 GSHWLTLFDAYGASGYALLFVVFFEVVGL 468
>Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical
protein AC3.5 protein.
Length = 1090
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +2
Query: 383 DRHYELLLINLAQPIAAGNYTVT-VRYRGQINTNPVDRGFYRGYYYVNNQLRYYATTQFQ 559
D + E + + L Q + G+ V + + +++ N G + Y Y N++ + + Q
Sbjct: 275 DENLEKVTLTLDQELKKGSTVVLKIPFTSKVSNN---NGL-KEYKYKNSEGKEQSMFTTQ 330
Query: 560 PFHA--RKAFPCFDEPQFKSIYIISITRDR 643
P ++ R FP FD+ FK+ I++ +
Sbjct: 331 PSYSYLRHVFPSFDQEAFKAPAAITLMHSK 360
>AC024765-5|AAF60527.3| 975|Caenorhabditis elegans Hypothetical
protein Y39A3CR.3 protein.
Length = 975
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 489 IEVFTEVTITSTISSDIMLPHNSSHSMLGRPSRASTSPSLNQYTSFQSPET 641
I VF + + STI+S+ + SS S + + S + +L+Q +SP++
Sbjct: 428 IRVFEQSILASTIASESLTSSASSTSSISSQNSTSKAQNLHQNRRPKSPDS 478
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,760,359
Number of Sequences: 27780
Number of extensions: 422246
Number of successful extensions: 1236
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1234
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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