Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16p10f
(773 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY661556-1|AAV70493.1| 714|Caenorhabditis elegans acetylcholine... 58 5e-09
AF078786-4|AAC26944.4| 714|Caenorhabditis elegans Sodium:neurot... 58 5e-09
Z19158-6|CAA79575.2| 615|Caenorhabditis elegans Hypothetical pr... 53 3e-07
Z19156-3|CAA79564.2| 615|Caenorhabditis elegans Hypothetical pr... 53 3e-07
AF079899-1|AAC83661.1| 615|Caenorhabditis elegans sodium- and c... 53 3e-07
AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin reu... 51 8e-07
AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of... 51 8e-07
DQ482733-1|ABF20556.1| 600|Caenorhabditis elegans SNF-3 protein. 48 7e-06
DQ118731-1|AAZ23105.1| 600|Caenorhabditis elegans sodium-couple... 48 7e-06
AF026211-1|AAB71293.2| 600|Caenorhabditis elegans Sodium:neurot... 48 7e-06
Z74041-8|CAA98519.2| 610|Caenorhabditis elegans Hypothetical pr... 47 1e-05
DQ482732-1|ABF20555.1| 610|Caenorhabditis elegans SNF-11 protein. 47 1e-05
AY529124-1|AAT02634.1| 610|Caenorhabditis elegans GABA transpor... 47 1e-05
Z82083-9|CAB04975.1| 635|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z81503-6|CAB04115.1| 635|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z82264-8|CAB05153.1| 706|Caenorhabditis elegans Hypothetical pr... 41 9e-04
AY825249-1|AAX24101.1| 728|Caenorhabditis elegans sodium-couple... 41 9e-04
AL110485-24|CAB60372.4| 728|Caenorhabditis elegans Hypothetical... 41 9e-04
Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical pr... 41 0.001
U41546-5|AAC48222.2| 1022|Caenorhabditis elegans Sodium:neurotra... 34 0.098
U39472-10|AAZ82853.1| 354|Caenorhabditis elegans Serpentine rec... 29 2.8
Z81043-7|CAN86898.1| 457|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81043-6|CAB02803.3| 491|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 6.4
AL031627-7|CAA20959.2| 200|Caenorhabditis elegans Hypothetical ... 28 6.4
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 28 8.5
AL132846-1|CAB60342.1| 102|Caenorhabditis elegans Hypothetical ... 28 8.5
>AY661556-1|AAV70493.1| 714|Caenorhabditis elegans
acetylcholine/choline transporter protein.
Length = 714
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/110 (23%), Positives = 49/110 (44%)
Frame = +3
Query: 138 LCTVAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQDAVG 317
L + G S W+ P F++GG +GQ S A+
Sbjct: 75 LAVIGFTAGVGSFWKFPFLVFQHGGAAFLVPYLCMLCLASLPMFFMEMVLGQFSSSAAIS 134
Query: 318 VWRAVPFFKGVGYLRLLVTTLSAIYTSVYLSLVITYSLYTLSNNIPFPEC 467
VW+ VP FKG+G+ ++ ++ A++ ++ + + Y + + S +IP+ C
Sbjct: 135 VWKVVPLFKGIGFAQVTISGFFAVFFNIISAWTLFYLINSFSFSIPWSNC 184
>AF078786-4|AAC26944.4| 714|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 6
protein.
Length = 714
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/110 (23%), Positives = 49/110 (44%)
Frame = +3
Query: 138 LCTVAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQDAVG 317
L + G S W+ P F++GG +GQ S A+
Sbjct: 75 LAVIGFTAGVGSFWKFPFLVFQHGGAAFLVPYLCMLCLASLPMFFMEMVLGQFSSSAAIS 134
Query: 318 VWRAVPFFKGVGYLRLLVTTLSAIYTSVYLSLVITYSLYTLSNNIPFPEC 467
VW+ VP FKG+G+ ++ ++ A++ ++ + + Y + + S +IP+ C
Sbjct: 135 VWKVVPLFKGIGFAQVTISGFFAVFFNIISAWTLFYLINSFSFSIPWSNC 184
>Z19158-6|CAA79575.2| 615|Caenorhabditis elegans Hypothetical
protein T23G5.5 protein.
Length = 615
Score = 52.8 bits (121), Expect = 3e-07
Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 1/121 (0%)
Frame = +3
Query: 138 LCTVAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQDAVG 317
L V AV + WR P F+ GG +GQ ++ A+
Sbjct: 51 LSVVGFAVDLGNIWRFPYLCFKNGGGVFLIPYSIMVLLTGVPLFYMELCLGQYYRKGAIT 110
Query: 318 VW-RAVPFFKGVGYLRLLVTTLSAIYTSVYLSLVITYSLYTLSNNIPFPECMGFYITPEI 494
W R P FKG+GY +L + +V L+ + Y + S N+P+ C Y +P
Sbjct: 111 TWGRICPLFKGIGYCVILTAFYVDFFYNVILAWGLHYLYTSFSFNLPWASCNNSYNSPAC 170
Query: 495 Y 497
Y
Sbjct: 171 Y 171
>Z19156-3|CAA79564.2| 615|Caenorhabditis elegans Hypothetical
protein T23G5.5 protein.
Length = 615
Score = 52.8 bits (121), Expect = 3e-07
Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 1/121 (0%)
Frame = +3
Query: 138 LCTVAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQDAVG 317
L V AV + WR P F+ GG +GQ ++ A+
Sbjct: 51 LSVVGFAVDLGNIWRFPYLCFKNGGGVFLIPYSIMVLLTGVPLFYMELCLGQYYRKGAIT 110
Query: 318 VW-RAVPFFKGVGYLRLLVTTLSAIYTSVYLSLVITYSLYTLSNNIPFPECMGFYITPEI 494
W R P FKG+GY +L + +V L+ + Y + S N+P+ C Y +P
Sbjct: 111 TWGRICPLFKGIGYCVILTAFYVDFFYNVILAWGLHYLYTSFSFNLPWASCNNSYNSPAC 170
Query: 495 Y 497
Y
Sbjct: 171 Y 171
>AF079899-1|AAC83661.1| 615|Caenorhabditis elegans sodium- and
chloride-dependentantidepressant- and cocaine-sensitive
dopamine transporterprotein.
Length = 615
Score = 52.8 bits (121), Expect = 3e-07
Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 1/121 (0%)
Frame = +3
Query: 138 LCTVAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQDAVG 317
L V AV + WR P F+ GG +GQ ++ A+
Sbjct: 51 LSVVGFAVDLGNIWRFPYLCFKNGGGVFLIPYSIMVLLTGVPLFYMELCLGQYYRKGAIT 110
Query: 318 VW-RAVPFFKGVGYLRLLVTTLSAIYTSVYLSLVITYSLYTLSNNIPFPECMGFYITPEI 494
W R P FKG+GY +L + +V L+ + Y + S N+P+ C Y +P
Sbjct: 111 TWGRICPLFKGIGYCVILTAFYVDFFYNVILAWGLHYLYTSFSFNLPWASCNNSYNSPAC 170
Query: 495 Y 497
Y
Sbjct: 171 Y 171
>AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin
reuptake transporter protein.
Length = 671
Score = 51.2 bits (117), Expect = 8e-07
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 5/122 (4%)
Frame = +3
Query: 138 LCTVAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQDAVG 317
L V AV + WR P +++GG +GQ + V
Sbjct: 111 LAVVGYAVDLGNIWRFPSVCYKHGGGAFLIPYFIMLMIGGLPMFYMELVLGQFHRSGCVS 170
Query: 318 VWRAV-PFFKGVGYLRLLVTTLSAIYTSVYLSLVITYSLYTLS----NNIPFPECMGFYI 482
+WR V P F+G+GY + T AI+ + ++ + +++ +LS + +P+ C +
Sbjct: 171 IWRKVCPLFRGIGYGICCICTFIAIFYNAIIAQAVYFAIVSLSKIWDSEVPWASCGNPWN 230
Query: 483 TP 488
TP
Sbjct: 231 TP 232
>AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 5 protein.
Length = 671
Score = 51.2 bits (117), Expect = 8e-07
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 5/122 (4%)
Frame = +3
Query: 138 LCTVAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQDAVG 317
L V AV + WR P +++GG +GQ + V
Sbjct: 111 LAVVGYAVDLGNIWRFPSVCYKHGGGAFLIPYFIMLMIGGLPMFYMELVLGQFHRSGCVS 170
Query: 318 VWRAV-PFFKGVGYLRLLVTTLSAIYTSVYLSLVITYSLYTLS----NNIPFPECMGFYI 482
+WR V P F+G+GY + T AI+ + ++ + +++ +LS + +P+ C +
Sbjct: 171 IWRKVCPLFRGIGYGICCICTFIAIFYNAIIAQAVYFAIVSLSKIWDSEVPWASCGNPWN 230
Query: 483 TP 488
TP
Sbjct: 231 TP 232
>DQ482733-1|ABF20556.1| 600|Caenorhabditis elegans SNF-3 protein.
Length = 600
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/111 (22%), Positives = 47/111 (42%)
Frame = +3
Query: 147 VAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQDAVGVWR 326
VA AVG + WR P ++ GG +GQ Q+ A+ +W
Sbjct: 44 VAYAVGLGNVWRFPYLCYKNGGGSFLVVYMIFFCLAAVPIFLMEVTVGQYLQKGAMEMWL 103
Query: 327 AVPFFKGVGYLRLLVTTLSAIYTSVYLSLVITYSLYTLSNNIPFPECMGFY 479
P F+GVG +++ + Y V ++ + Y + +++ P+ C ++
Sbjct: 104 MCPLFRGVGIGNVVIAFMCIAYFCVIVAWAMFYMISSIAWVFPWETCNNYW 154
>DQ118731-1|AAZ23105.1| 600|Caenorhabditis elegans sodium-coupled
betaine transporterprotein protein.
Length = 600
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/111 (22%), Positives = 47/111 (42%)
Frame = +3
Query: 147 VAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQDAVGVWR 326
VA AVG + WR P ++ GG +GQ Q+ A+ +W
Sbjct: 44 VAYAVGLGNVWRFPYLCYKNGGGSFLVVYMIFFCLAAVPIFLMEVTVGQYLQKGAMEMWL 103
Query: 327 AVPFFKGVGYLRLLVTTLSAIYTSVYLSLVITYSLYTLSNNIPFPECMGFY 479
P F+GVG +++ + Y V ++ + Y + +++ P+ C ++
Sbjct: 104 MCPLFRGVGIGNVVIAFMCIAYFCVIVAWAMFYMISSIAWVFPWETCNNYW 154
>AF026211-1|AAB71293.2| 600|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 3
protein.
Length = 600
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/111 (22%), Positives = 47/111 (42%)
Frame = +3
Query: 147 VAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQDAVGVWR 326
VA AVG + WR P ++ GG +GQ Q+ A+ +W
Sbjct: 44 VAYAVGLGNVWRFPYLCYKNGGGSFLVVYMIFFCLAAVPIFLMEVTVGQYLQKGAMEMWL 103
Query: 327 AVPFFKGVGYLRLLVTTLSAIYTSVYLSLVITYSLYTLSNNIPFPECMGFY 479
P F+GVG +++ + Y V ++ + Y + +++ P+ C ++
Sbjct: 104 MCPLFRGVGIGNVVIAFMCIAYFCVIVAWAMFYMISSIAWVFPWETCNNYW 154
>Z74041-8|CAA98519.2| 610|Caenorhabditis elegans Hypothetical
protein T03F7.1 protein.
Length = 610
Score = 47.2 bits (107), Expect = 1e-05
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Frame = +3
Query: 72 VLEMFDTYKLKKWISWPLIRAHLCTVAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXX 251
++E + ++W SW + + A+G + WR P ++ GG
Sbjct: 1 MVEATSVAEREQWSSWADFI--MSCIGYAIGLGNVWRFPYLCYQNGGGAFLIPYCISLVF 58
Query: 252 XXXXXXXXXXXIGQLSQQDAVGVWRAVPFFKGVGYLRLLVTTLSAIYTSVYLSLVIT--Y 425
GQL +G+++ P FKGVG ++ IY V LS T Y
Sbjct: 59 CGAPLFILETSWGQLMSVGGLGMFKICPIFKGVGIAAAVMAFWLNIYYIVVLSWAATYLY 118
Query: 426 SLYTLSNNIPFPECMGFYITP 488
+ +T+S ++P+ C + TP
Sbjct: 119 NSFTMS-DVPWKNCDHAWNTP 138
>DQ482732-1|ABF20555.1| 610|Caenorhabditis elegans SNF-11 protein.
Length = 610
Score = 47.2 bits (107), Expect = 1e-05
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Frame = +3
Query: 72 VLEMFDTYKLKKWISWPLIRAHLCTVAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXX 251
++E + ++W SW + + A+G + WR P ++ GG
Sbjct: 1 MVEATSVAEREQWSSWADFI--MSCIGYAIGLGNVWRFPYLCYQNGGGAFLIPYCISLVF 58
Query: 252 XXXXXXXXXXXIGQLSQQDAVGVWRAVPFFKGVGYLRLLVTTLSAIYTSVYLSLVIT--Y 425
GQL +G+++ P FKGVG ++ IY V LS T Y
Sbjct: 59 CGAPLFILETSWGQLMSVGGLGMFKICPIFKGVGIAAAVMAFWLNIYYIVVLSWAATYLY 118
Query: 426 SLYTLSNNIPFPECMGFYITP 488
+ +T+S ++P+ C + TP
Sbjct: 119 NSFTMS-DVPWKNCDHAWNTP 138
>AY529124-1|AAT02634.1| 610|Caenorhabditis elegans GABA transporter
protein protein.
Length = 610
Score = 47.2 bits (107), Expect = 1e-05
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Frame = +3
Query: 72 VLEMFDTYKLKKWISWPLIRAHLCTVAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXX 251
++E + ++W SW + + A+G + WR P ++ GG
Sbjct: 1 MVEATSVAEREQWSSWADFI--MSCIGYAIGLGNVWRFPYLCYQNGGGAFLIPYCISLVF 58
Query: 252 XXXXXXXXXXXIGQLSQQDAVGVWRAVPFFKGVGYLRLLVTTLSAIYTSVYLSLVIT--Y 425
GQL +G+++ P FKGVG ++ IY V LS T Y
Sbjct: 59 CGAPLFILETSWGQLMSVGGLGMFKICPIFKGVGIAAAVMAFWLNIYYIVVLSWAATYLY 118
Query: 426 SLYTLSNNIPFPECMGFYITP 488
+ +T+S ++P+ C + TP
Sbjct: 119 NSFTMS-DVPWKNCDHAWNTP 138
>Z82083-9|CAB04975.1| 635|Caenorhabditis elegans Hypothetical
protein ZK1010.9 protein.
Length = 635
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Frame = +3
Query: 126 IRAHLCTVAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQ 305
I + L ++ AVG + WR P A++ GG +GQ + +
Sbjct: 72 IESFLSSLGQAVGLGNIWRFPTTAYKNGGLSFLIAYVVCGILFAVPAIHMEFALGQYAAK 131
Query: 306 DAVGVW-RAVPFFKGVGYLRLLVTTLSAIYTSVYLSLVITY 425
+ R +P +GVG++ LV + +Y + +S ++ Y
Sbjct: 132 SPPAAFRRMMPILEGVGWMTCLVGAIIGVYYMIVISWIVLY 172
>Z81503-6|CAB04115.1| 635|Caenorhabditis elegans Hypothetical
protein ZK1010.9 protein.
Length = 635
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Frame = +3
Query: 126 IRAHLCTVAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQ 305
I + L ++ AVG + WR P A++ GG +GQ + +
Sbjct: 72 IESFLSSLGQAVGLGNIWRFPTTAYKNGGLSFLIAYVVCGILFAVPAIHMEFALGQYAAK 131
Query: 306 DAVGVW-RAVPFFKGVGYLRLLVTTLSAIYTSVYLSLVITY 425
+ R +P +GVG++ LV + +Y + +S ++ Y
Sbjct: 132 SPPAAFRRMMPILEGVGWMTCLVGAIIGVYYMIVISWIVLY 172
>Z82264-8|CAB05153.1| 706|Caenorhabditis elegans Hypothetical
protein C49C3.1 protein.
Length = 706
Score = 41.1 bits (92), Expect = 9e-04
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +3
Query: 138 LCTVAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQDAVG 317
L T+ +AVG + WR P A+ GG +GQ + A
Sbjct: 55 LSTLGMAVGLGNIWRFPTRAYNNGGSAFLVPYVACALLFGLPAVYLEFLLGQYHRTTAPI 114
Query: 318 VWRA-VPFFKGVGYLRLLVTTLSAIYTSVYLSLVITY 425
++R P +GVG++ + V++L AIY + + Y
Sbjct: 115 IFRRFAPILQGVGWMAVAVSSLVAIYYIIIIGWSTVY 151
>AY825249-1|AAX24101.1| 728|Caenorhabditis elegans sodium-coupled
neutral amino acidtransporter protein.
Length = 728
Score = 41.1 bits (92), Expect = 9e-04
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = +3
Query: 138 LCTVAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQDAVG 317
L ++ +AVG + WR P A+ GG GQ +
Sbjct: 93 LTSLGLAVGLGNIWRFPTRAYNNGGSAFLIPYLTCAFLFGLPAVYFEFLTGQYQGKSPPV 152
Query: 318 VWRAV-PFFKGVGYLRLLVTTLSAIYTSVYLSLVITYSL 431
++R V P +GVG++ + V L AIY V +S + Y +
Sbjct: 153 IFRRVRPILEGVGWMGVFVAALVAIYYIVIVSWISIYMI 191
>AL110485-24|CAB60372.4| 728|Caenorhabditis elegans Hypothetical
protein Y46G5A.30 protein.
Length = 728
Score = 41.1 bits (92), Expect = 9e-04
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = +3
Query: 138 LCTVAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQDAVG 317
L ++ +AVG + WR P A+ GG GQ +
Sbjct: 93 LTSLGLAVGLGNIWRFPTRAYNNGGSAFLIPYLTCAFLFGLPAVYFEFLTGQYQGKSPPV 152
Query: 318 VWRAV-PFFKGVGYLRLLVTTLSAIYTSVYLSLVITYSL 431
++R V P +GVG++ + V L AIY V +S + Y +
Sbjct: 153 IFRRVRPILEGVGWMGVFVAALVAIYYIVIVSWISIYMI 191
>Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical
protein F55H12.1 protein.
Length = 768
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +3
Query: 126 IRAHLCTVAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQ 305
I + L ++ A+G + WR P A++ GG +GQ + +
Sbjct: 115 IESLLSSLGQAIGLGNIWRFPTVAYQNGGTSFLIVYIICAFVFAVPAIHMEFALGQYAAK 174
Query: 306 DAVGVWRAV-PFFKGVGYLRLLVTTLSAIYTSVYLSLVITY 425
V+R + P +GVG++ +V + +Y + +S ++ Y
Sbjct: 175 SPPAVFRRIMPALEGVGWMTCIVGAVIGVYYMILISWIVLY 215
>U41546-5|AAC48222.2| 1022|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 12
protein.
Length = 1022
Score = 34.3 bits (75), Expect = 0.098
Identities = 30/146 (20%), Positives = 53/146 (36%), Gaps = 6/146 (4%)
Frame = +3
Query: 138 LCTVAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQDA-V 314
L + VG T R P + +++GG +GQ + Q A
Sbjct: 168 LSCLGFMVGVGHTMRFPAKVYQHGGGVFFIPYLFSLIFFGLPLVFLHLSLGQYTGQAANT 227
Query: 315 GVWRAVPFFKGVGYLRLLVTTLSAIYTSVYLSLVITYSLYT-----LSNNIPFPECMGFY 479
R +P GVG+ +++ A+Y ++ ++ I Y + L + +P+ C +
Sbjct: 228 AFQRLMPIGSGVGWALVVIAIPVAVYYNIIVAWAIHYFFQSAKGLLLGDELPWETCRDEW 287
Query: 480 ITPEIYVNAMNSSECLDETFLAPASE 557
N N C + T A E
Sbjct: 288 QLDNRCCNLHNLHSCFNSTNSITAPE 313
>U39472-10|AAZ82853.1| 354|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 36 protein.
Length = 354
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 354 YLRLLVTTLSAIYTSVYLSLVITYSLY-TLSNNIPFPECMGFYITPEIY 497
+L LV L+ ++T + ++++ S++ T + N+ F CM +YI +IY
Sbjct: 35 FLHNLVIILTMVFTRKAVKIMLSKSMFSTTTRNLLF-YCMNYYIFHDIY 82
>Z81043-7|CAN86898.1| 457|Caenorhabditis elegans Hypothetical
protein C29F3.7b protein.
Length = 457
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = -2
Query: 496 YISGVI*NPIHSGKGILLLRVYKEYVMTSDK*TLVYIALKVVTNNRR*PTPLKNGTALQT 317
+ G N + G G+ LL +YV TS++ + YI NN P L++ ++
Sbjct: 164 FFDGTTRNSTYLGTGLQLLTGKSQYVSTSNQMLISYIGDSWAVNNS--PIVLQDYENTKS 221
Query: 316 PTASCWLSCP 287
W+ CP
Sbjct: 222 ICKFEWILCP 231
>Z81043-6|CAB02803.3| 491|Caenorhabditis elegans Hypothetical
protein C29F3.7a protein.
Length = 491
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = -2
Query: 496 YISGVI*NPIHSGKGILLLRVYKEYVMTSDK*TLVYIALKVVTNNRR*PTPLKNGTALQT 317
+ G N + G G+ LL +YV TS++ + YI NN P L++ ++
Sbjct: 198 FFDGTTRNSTYLGTGLQLLTGKSQYVSTSNQMLISYIGDSWAVNNS--PIVLQDYENTKS 255
Query: 316 PTASCWLSCP 287
W+ CP
Sbjct: 256 ICKFEWILCP 265
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/75 (24%), Positives = 26/75 (34%), Gaps = 1/75 (1%)
Frame = -2
Query: 349 TPLKNGTALQTPTASCWLSCPIANCSKTTGKATTTNASVNTRANVRPP*RNAS-RGARHV 173
TP T TPT + + TT + TTT + T+ +P +
Sbjct: 223 TPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTT 282
Query: 172 LVKPTATATVHKCAR 128
PT T T K +
Sbjct: 283 TTTPTTTTTTAKTTK 297
>AL031627-7|CAA20959.2| 200|Caenorhabditis elegans Hypothetical
protein Y102A5C.16 protein.
Length = 200
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 313 TASCWLSCPIANCSKTTGKATTTNASVNTRA 221
TA+CW S A CSKTT T ++ + A
Sbjct: 123 TAACWSSPLTATCSKTTSFEWTDGSATGSDA 153
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 294 AVQ*PTVAKQPAKLPPRMPVSIP 226
AVQ P A P + PPR P ++P
Sbjct: 443 AVQHPLAASTPVRRPPRQPQALP 465
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 294 AVQ*PTVAKQPAKLPPRMPVSIP 226
AVQ P A P + PPR P ++P
Sbjct: 443 AVQHPLAASTPVRRPPRQPQALP 465
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 294 AVQ*PTVAKQPAKLPPRMPVSIP 226
AVQ P A P + PPR P ++P
Sbjct: 443 AVQHPLAASTPVRRPPRQPQALP 465
>AL132846-1|CAB60342.1| 102|Caenorhabditis elegans Hypothetical
protein Y43D4A.1 protein.
Length = 102
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 138 LCTVAVAVGFTSTWRAPREAFRYGG 212
L T+ +AVG + WR P A+ GG
Sbjct: 55 LSTLGMAVGLGNIWRFPTRAYNNGG 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,432,056
Number of Sequences: 27780
Number of extensions: 405302
Number of successful extensions: 1087
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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