Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16p10f
(773 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 53 3e-09
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 53 3e-09
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 47 2e-07
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 24 1.8
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 24 1.8
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 5.5
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 5.5
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 7.3
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 21 9.6
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 53.2 bits (122), Expect = 3e-09
Identities = 27/110 (24%), Positives = 49/110 (44%)
Frame = +3
Query: 138 LCTVAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQDAVG 317
L V +A+G + WR P ++ GG +GQ+ +G
Sbjct: 30 LSVVGLAIGLGNLWRFPYLCYKNGGGAFMVPYFIALALAGVPMFLMELSLGQMMTIGGLG 89
Query: 318 VWRAVPFFKGVGYLRLLVTTLSAIYTSVYLSLVITYSLYTLSNNIPFPEC 467
V++ P FKG+GY +++ + IY + L+ + Y L +L ++P+ C
Sbjct: 90 VFKIAPIFKGIGYATCVLSCWTNIYYIIILAWALFYLLVSLRIDLPWRTC 139
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 53.2 bits (122), Expect = 3e-09
Identities = 27/110 (24%), Positives = 49/110 (44%)
Frame = +3
Query: 138 LCTVAVAVGFTSTWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQDAVG 317
L V +A+G + WR P ++ GG +GQ+ +G
Sbjct: 83 LSVVGLAIGLGNLWRFPYLCYKNGGGAFMVPYFIALALAGVPMFLMELSLGQMMTIGGLG 142
Query: 318 VWRAVPFFKGVGYLRLLVTTLSAIYTSVYLSLVITYSLYTLSNNIPFPEC 467
V++ P FKG+GY +++ + IY + L+ + Y L +L ++P+ C
Sbjct: 143 VFKIAPIFKGIGYATCVLSCWTNIYYIIILAWALFYLLVSLRIDLPWRTC 192
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 47.2 bits (107), Expect = 2e-07
Identities = 23/105 (21%), Positives = 44/105 (41%)
Frame = +3
Query: 171 STWRAPREAFRYGGXXXXXXXXXXXXXXXXXXXXXXXXIGQLSQQDAVGVWRAVPFFKGV 350
+ WR P ++ GG +GQ+ +GV++ P FKG+
Sbjct: 3 NVWRFPYLCYKNGGGAFLIPYFLTLVLAGIPMFFMELALGQMLTVGGLGVFKIAPLFKGI 62
Query: 351 GYLRLLVTTLSAIYTSVYLSLVITYSLYTLSNNIPFPECMGFYIT 485
GY +++ +Y V L+ I Y ++ + +P+ C ++ T
Sbjct: 63 GYAAAVMSCWMNVYYIVILAWAIFYFFMSMRSELPWGSCNNYWNT 107
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 176 MACASRSIPLRRSNIRSGIDTGIRGGSFA 262
+ CA RS P + +G G+ GGS++
Sbjct: 51 LECADRSAPRVKKTASAGPIFGVIGGSYS 79
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 176 MACASRSIPLRRSNIRSGIDTGIRGGSFA 262
+ CA RS P + +G G+ GGS++
Sbjct: 141 LECADRSAPRVKKTASAGPIFGVIGGSYS 169
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.2 bits (45), Expect = 5.5
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 402 YLSLVITYSLYTLSNNIPFPECMG-FY 479
Y L Y + LSN++ FP+ G FY
Sbjct: 232 YFMLNHNYPPFMLSNSLNFPQIRGEFY 258
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.2 bits (45), Expect = 5.5
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 402 YLSLVITYSLYTLSNNIPFPECMG-FY 479
Y L Y + LSN++ FP+ G FY
Sbjct: 232 YFMLNHNYPPFMLSNSLNFPQIRGEFY 258
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.8 bits (44), Expect = 7.3
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1
Query: 497 IYFRCNIESHTLRE 456
+YFRC+ +H +RE
Sbjct: 442 LYFRCSNLNHMMRE 455
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.4 bits (43), Expect = 9.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 254 SFAGCFATVGYWTAQPARC 310
+FAG +GYW P C
Sbjct: 80 TFAGVNDLLGYWVFGPRFC 98
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,417
Number of Sequences: 438
Number of extensions: 4908
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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