Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16o19f
         (739 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92812-9|CAM84813.1|  338|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical...    29   2.6  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    29   4.5  
AC006832-7|AAF39999.1|  505|Caenorhabditis elegans Hypothetical ...    28   7.9  

>Z92812-9|CAM84813.1|  338|Caenorhabditis elegans Hypothetical
           protein T03E6.9 protein.
          Length = 338

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = -3

Query: 647 FPIYLLNLVLILQSRVSQVQCFS--FFELLQIKWRYLIIVFVCTC-FIKPKI 501
           FP+YL  ++LIL+S+   V      F   + I + +LI++ V  C  ++P +
Sbjct: 31  FPVYLTAILLILKSKSKLVLAVKKLFLRQIVINYIFLILISVIVCPILEPPV 82


>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.31 protein.
          Length = 1219

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 20/84 (23%), Positives = 35/84 (41%)
 Frame = +3

Query: 177 CGDANQPGQCHNVHISTNFYYGFHEVKTSGINHMATDCEMQEVPIEKNVNTLVTTARKRS 356
           C  +N    CH + + TN+    +E+  SG   +      +    E+N    ++   +R 
Sbjct: 264 CASSNS-SDCHWIRLHTNYNKCIYEISKSGQFPVLMTLAQKNREAEENKQRAMSEQYRRR 322

Query: 357 ADNSGYPQSKRFREEVMVPTTTNS 428
            +N    QS+    EV   TTT +
Sbjct: 323 YENR--EQSEYILREVPTTTTTTT 344


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
           protein T19D12.1 protein.
          Length = 1844

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/58 (25%), Positives = 31/58 (53%)
 Frame = +3

Query: 210 NVHISTNFYYGFHEVKTSGINHMATDCEMQEVPIEKNVNTLVTTARKRSADNSGYPQS 383
           NV IS       + V   G   +++  ++ ++P +KNVN+++T+     +D +  PQ+
Sbjct: 127 NVQISALRQGSDNSVVAIGNGAISSTSDLGQMPTDKNVNSVITSDNTTYSDVTTAPQA 184


>AC006832-7|AAF39999.1|  505|Caenorhabditis elegans Hypothetical
           protein ZK355.5 protein.
          Length = 505

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/48 (27%), Positives = 28/48 (58%)
 Frame = +2

Query: 551 SILSAEVQRKKNIGPETHETAKLKPSSEDILESLFWNIHGGHFYSYLK 694
           +ILS   + +K +    H+  ++K    + + +LFW+++GG F+  L+
Sbjct: 256 TILSTNGRGRKKVIVNIHDNYEMKRLGFEKI-NLFWDLYGGKFFINLQ 302


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,173,594
Number of Sequences: 27780
Number of extensions: 409936
Number of successful extensions: 1121
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)