Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16o09f
(774 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 184 1e-47
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 164 1e-41
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 112 5e-26
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 104 1e-23
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 95 1e-20
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 53 4e-08
SPAC139.03 |||transcription factor, zf-fungal binuclear cluster ... 27 3.0
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 26 5.2
SPBC725.14 |arg6||acetylglutamate synthase Arg6 |Schizosaccharom... 26 5.2
SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc... 26 6.9
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 26 6.9
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 25 9.1
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 184 bits (448), Expect = 1e-47
Identities = 88/182 (48%), Positives = 116/182 (63%)
Frame = +3
Query: 225 GLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMD 404
GLFINN+ V S G K +P+ ++I EV F+ +PWR
Sbjct: 24 GLFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQTDAPWRKFS 83
Query: 405 ASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIH 584
+++RG +++LAD IE++ YLAS+ETLDNGK + GD+ A+ RYY GWADK +
Sbjct: 84 SAQRGRCLSRLADCIEQNLEYLASIETLDNGKSITLAR-GDVQAAADCFRYYGGWADKDY 142
Query: 585 GNVLPADGKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLT 764
G + D K FAYTRHEP+GVCGQIIPWNFP LM AWK+ PA+A G T+++K AE TPL+
Sbjct: 143 GQTIETDIKRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACGNTIILKTAELTPLS 202
Query: 765 AL 770
AL
Sbjct: 203 AL 204
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 164 bits (399), Expect = 1e-41
Identities = 80/183 (43%), Positives = 115/183 (62%)
Frame = +3
Query: 225 GLFINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMD 404
GL+IN EW KS++ T++T +P+ +VIA+V FK W+ +
Sbjct: 22 GLYINGEWHKSAE--TWETVDPSIEEVIAKVYLAGEKEIDYAVKSAKEAFKT---WKKVP 76
Query: 405 ASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIH 584
SE+G L+ KLA+L E+ LA++E +D+GKP + GD+ +I LRY AGWADKI+
Sbjct: 77 GSEKGELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYCAGWADKIY 136
Query: 585 GNVLPADGKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLT 764
G V+P + AY + P+GVCGQI+PWN+P+ MA WK+ PALA G +++K AE TPL+
Sbjct: 137 GQVIPTGPEKLAYAKRTPIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIKSAETTPLS 196
Query: 765 ALY 773
LY
Sbjct: 197 LLY 199
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 112 bits (270), Expect = 5e-26
Identities = 66/181 (36%), Positives = 98/181 (54%), Gaps = 1/181 (0%)
Frame = +3
Query: 231 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 410
+I +WV ++ GKTF ENP + +A V F +R D
Sbjct: 27 YIGGKWVTAASGKTFDVENPGLNETLAPVTDMSVEETRKAIKVAHEAFL---SYRNSDIK 83
Query: 411 ERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHGN 590
ER A++ + DLI + LA++ TL+NGK D+ G++ + K + ++AG A +I G+
Sbjct: 84 ERYAILRRWYDLIMENADDLATMMTLENGKALGDAK-GEVVYAAKFIDWFAGEALRISGD 142
Query: 591 V-LPADGKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLTA 767
+ ++ + T +PVGV G I PWNFP M K+G ALA GCTVV++PA +TP TA
Sbjct: 143 SSMSSNPQNRIITIKQPVGVVGIITPWNFPAAMITRKVGAALAAGCTVVIRPAAETPFTA 202
Query: 768 L 770
L
Sbjct: 203 L 203
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 104 bits (250), Expect = 1e-23
Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 2/182 (1%)
Frame = +3
Query: 231 FINNEWVKSSDGKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTMDAS 410
F+ +W+ S + KTF+ +NPA G++I +V FK ++
Sbjct: 21 FVQGKWISSPNNKTFEVDNPATGEIIGKVADVSVEETKKAISAANEAFKT---YKNFTHV 77
Query: 411 ERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKIHGN 590
+R L+ + A+LI ++ L + TL+NGKP + ++ L++YA A + G+
Sbjct: 78 QRSQLLERWAELIMENKDDLVKMLTLENGKPLSQAEM-EVTTCSGYLKWYAAEAVRTFGD 136
Query: 591 VLPAD--GKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQTPLT 764
V P+ + F + +PVGV I PWNFP M A K G ALA GCT + PA +TP
Sbjct: 137 VAPSSLQSQNFLISIKQPVGVSALITPWNFPAAMIARKGGAALAAGCTAIFLPAFRTPYV 196
Query: 765 AL 770
L
Sbjct: 197 CL 198
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 95.1 bits (226), Expect = 1e-20
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 5/186 (2%)
Frame = +3
Query: 228 LFINNEWVKSSD--GKTFKTENPANGQVIAEVQHXXXXXXXXXXXXXXXXFKLGSPWRTM 401
LFI+ ++V + K NPA ++I + F+ G W
Sbjct: 23 LFIDGKFVSPIEPAAKPIPLINPATEEIIGTCANASAKDVDSAVENAYNTFRSGI-WAKW 81
Query: 402 DASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRYYAGWADKI 581
+RG ++ K+A ++ R LA ++T++ GKP + F D+ + YYA A+
Sbjct: 82 PGKQRGLVLRKIAKMMREKRELLAGIDTINCGKPTPYALF-DIDSCADMFEYYAEVAETD 140
Query: 582 HGNV---LPADGKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATGCTVVMKPAEQ 752
+ V LP + + A+ + P GV G I PWNFP+ MA WKL PA+A+G VV+KP+E
Sbjct: 141 NPTVKVPLPNNPGFCAFEKRFPRGVIGVITPWNFPLKMALWKLVPAIASGNCVVLKPSEL 200
Query: 753 TPLTAL 770
P + L
Sbjct: 201 APWSCL 206
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 53.2 bits (122), Expect = 4e-08
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
Frame = +3
Query: 390 WRTMDASERGALINKLADLIERDRTYLASLETLDNGKPYKDSYFGDLYASIKNLRY-YAG 566
W++ +ER + L + I R++ A + D GK D+ FG++ +++ + + A
Sbjct: 41 WKSTSFAERRNFLKALKENIIRNQDKYAEIACKDTGKTLVDAAFGEILVTLEKINWTLAN 100
Query: 567 WADKIHGNVLPAD---GKYFAYTRHEPVGVCGQIIPWNFPILMAAWKLGPALATGCTVVM 737
+ P Y ++EP+GV ++ WN+P+ A + AL G +V+
Sbjct: 101 GEQSLRPTKRPNSLLTSYKGGYVKYEPLGVIAALVSWNYPLHNALGPIISALFAGNAIVV 160
Query: 738 KPAEQT 755
K +E T
Sbjct: 161 KGSELT 166
>SPAC139.03 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 563 RVGRQDPRECPA-RRRKILCLHSS*ASGCVRSDNTMELPYIDGG 691
+ R+ C A RR+K+ C H S C++ YID G
Sbjct: 14 QTSRRAIHSCLACRRKKLKCDHGRPCSNCLKRSTIQSCIYIDPG 57
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 122 VAERLQIGSGAKSEFCNSCFSGTGSPNKT-GNFIHWSLHKQ*VGEV 256
+A + + + CN+ G NK GN IH+ L K G+V
Sbjct: 1054 LAHEINAADSSSEQICNALRRGFLRLNKKLGNVIHYDLRKSSEGDV 1099
>SPBC725.14 |arg6||acetylglutamate synthase Arg6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 567 TRRSTVGFLLKHTDHRNTSP 508
+RRST GFL KH+ ++ SP
Sbjct: 19 SRRSTKGFLQKHSSLKDGSP 38
>SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein
Ubr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1958
Score = 25.8 bits (54), Expect = 6.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 40 IHLNKLVPVTVRDYFVCVLWNI*IY 114
+H N +P+ D FV +LW+ +Y
Sbjct: 969 LHSNITIPILQSDSFVGILWHTIVY 993
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -1
Query: 195 EPVPLKQLLQNSLFAPEPICRRSATFLIYLYVPKYTDKIISYSYRHKFV 49
+P + L+ ++ + +C R AT +Y Y P + +S+SYR +
Sbjct: 326 KPSTTSKNLKFTIMSYNVLCERYATSTLYGYTPSWA---LSWSYRKDLI 371
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 25.4 bits (53), Expect = 9.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 758 RRLLGRLHDHSTTRRQSWPELPSRHQYREVP 666
+ +LG+ D + RR S SRH+Y E P
Sbjct: 35 KTVLGKGKDSNHDRRTSTDTTHSRHRYPETP 65
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,205,042
Number of Sequences: 5004
Number of extensions: 67139
Number of successful extensions: 177
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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