Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16o08r
(853 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 49 1e-06
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 43 5e-05
SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyc... 39 8e-04
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 36 0.006
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 35 0.013
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 31 0.16
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 29 0.84
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 29 0.84
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 29 1.1
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 28 1.5
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 1.5
SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit S... 28 1.5
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 1.9
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 27 4.5
SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 26 5.9
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 26 5.9
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 26 7.8
SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr 1|||... 26 7.8
>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 48.8 bits (111), Expect = 1e-06
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 9/153 (5%)
Frame = -1
Query: 508 PTKELFIRWVQANTFLPAMQ-YSFV------PWNFDNETTEISRKYTDLHAAYADEIYAI 350
P ELF+RW + F P + ++ + PW + T + R+ + Y
Sbjct: 637 PDAELFVRWYETAIFYPFFRAHAHIDTKRREPWLYGEPYTSLVRELLRIRYRLLPTWYTA 696
Query: 349 MEASVKEGKPVNAPLWWIDPNDEEALVIWDEYLLGEN-ILVAPVLTEGATSRDVYLPAG- 176
S G P+ P + + P DEE I D++ +G++ +LV PV +YL
Sbjct: 697 FYNSHTHGFPILYPQFLMHPEDEEGFAIDDQFYVGDSGLLVKPVTHPSIDKITIYLADDE 756
Query: 175 VWYEEGDRSRVLEGPTWLRAYPAPLDVLPYFVR 77
V+++ D + + PAPL +P +R
Sbjct: 757 VYFDLHDHTEY--AGKGHQVVPAPLGRVPVLLR 787
>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 993
Score = 43.2 bits (97), Expect = 5e-05
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 10/174 (5%)
Frame = -1
Query: 655 DRDSIWG-LNNGLSTIVTTTIQMNLNGYTLVLPDMIGGNGFNLNHDQADLPTKELFIRWV 479
D S W + + +S+I+T NL G +V D+ G NG N D+ EL RW+
Sbjct: 672 DNKSQWSDMVSSISSILT----FNLLGIPMVGADVCGYNG---NTDE------ELCARWM 718
Query: 478 QANTFLPAMQYSFVPWNFDNE------TTEISRKYTDLHAAYADEIYAIMEASVKEGKPV 317
FLP + + E E SR ++ + Y +M + +G P+
Sbjct: 719 ALGAFLPFYRNHNSLGSIPQEPFRWASVAEASRSAIEIRYSLLPYWYTLMHTASVDGTPM 778
Query: 316 NAPLWWIDPNDEEALVIWDEYLLGENILVAPVLTEGATSRDVYLPAG---VWYE 164
PL++ P + ++++G +L++P L T +P +WY+
Sbjct: 779 VRPLFFEFPKQISLASVDKQFMIGTALLISPALEPNTTYIQGIIPGDNDTIWYD 832
>SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 39.1 bits (87), Expect = 8e-04
Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 10/203 (4%)
Frame = -1
Query: 655 DRDSIWGLNNGLSTIVTTTIQMNLNGYTLVLPDMIGGNGFNLNHDQADLPTKELFIRWVQ 476
D S+W + + ++ I N+ G +V D+ G G +D +EL RW+
Sbjct: 647 DNHSLW---SNMFFSISGMIVFNMMGIPMVGADVCGFLG------DSD---EELCSRWMA 694
Query: 475 ANTFLP-------AMQYSFVPWNFDNETTEISRKYTDLHAAYADEIYAIMEASVKEGKPV 317
F P Q S P+ + + E SR+ + + Y IM + ++G P
Sbjct: 695 MGAFSPFYRNHNNIYQISQEPYTWSS-VAEASRRAMYIRYSLLPYWYTIMAKASQDGTPA 753
Query: 316 NAPLWWIDPNDEEALVIWDEYLLGENILVAPVLTEGATSRDVYLP---AGVWYEEGDRSR 146
L+ PND + ++++G+++LV PVL P + VWY+ + +
Sbjct: 754 LRALFVEFPNDPTLADVDRQFMVGDSLLVTPVLEPNVEYVQGVFPGDNSTVWYDWYNHTE 813
Query: 145 VLEGPTWLRAYPAPLDVLPYFVR 77
++ APL+ + +R
Sbjct: 814 IVRQYNENVTLYAPLEHINVAIR 836
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 36.3 bits (80), Expect = 0.006
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 7/153 (4%)
Frame = -1
Query: 655 DRDSIWGLNNGLSTIVTTTIQMNLNGYTLVLPDMIGGNGFNLNHDQADLPTKELFIRWVQ 476
D S+W + + + + N+ G +V D+ G G N D+ EL RW+
Sbjct: 669 DNYSLW---SNMIFSIPGALTFNMVGLPMVGADVCGFMG---NTDE------ELCSRWMA 716
Query: 475 ANTFLPAMQ-------YSFVPWNFDNETTEISRKYTDLHAAYADEIYAIMEASVKEGKPV 317
FLP + S P+ +++ E SR ++ + Y +M + +G P+
Sbjct: 717 LGAFLPFYRNHNSLGSISQEPYRWES-VAESSRCAMNIRYSLLPYWYTLMYEASSQGLPL 775
Query: 316 NAPLWWIDPNDEEALVIWDEYLLGENILVAPVL 218
PL++ PN+ ++++G +LV PVL
Sbjct: 776 IRPLFFEFPNEPSLANADRQFMVGSALLVTPVL 808
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 35.1 bits (77), Expect = 0.013
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Frame = +3
Query: 21 NNRAERQGAVAASGALTFSLTK*GSTSRGAGYALSQVGPSRTRDRSPSSYQTPAGRYTSR 200
++ + Q +V+++ + TFS STS + S V S + S SS T + TS
Sbjct: 180 SSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSS 239
Query: 201 LVAPSVSTGAT-RMFSPRRYSSQMTSASSSLGSIHQSGALTGLPSLT 338
+ + S S+ +T S SS +S+SSS I S + + P+ T
Sbjct: 240 IPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTST 286
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 31.5 bits (68), Expect = 0.16
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = +3
Query: 30 AERQGAVAASGALTFS---LTK*GSTSRGAGYALSQVGPSRTRDRSPSSYQTPAGRYTSR 200
++ QG++A S F T ST G Y+ + + + +PSS T + +S
Sbjct: 103 SQNQGSLAQSEQFDFEGSDSTLAASTISGGIYSSTSASSTSSSTATPSSSSTTSSSSSSS 162
Query: 201 LVAPSVSTGATRMFSPRRYSSQMTSASSSLGSIHQSGALT 320
P S+ + + S S +SASSS GSI + A T
Sbjct: 163 SSTPISSSITSSISSSASSSVSSSSASSS-GSISSADAKT 201
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 29.1 bits (62), Expect = 0.84
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +3
Query: 156 SPSSYQTPAGRYTSRLVAPSVSTGATRMFSPRRYSSQMTSASSSLGSIHQSGALTGLPS 332
+P P +Y S + APS S+ + F PRR S +++ I S + PS
Sbjct: 221 TPVMVPNPYFQYNSSMTAPSSSSSSVAPFVPRRQFSVSSASDPPQTPISMSPPIPPTPS 279
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 29.1 bits (62), Expect = 0.84
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Frame = +3
Query: 39 QGAVAASGALT-FSLTK*GSTSRGAGYALSQVGPSRTRDRSPSSYQTPAGRYTSRLVAPS 215
Q + ASG T F+ S +GY +S + +++ + + T + S
Sbjct: 735 QSSGDASGFNTIFTSISQSSDGETSGYTISSNSSQNSASEPQTAFTSSSSSATPTITQSS 794
Query: 216 VSTGATRMFSPR-RYSSQMTS----ASSSLGSIHQSGALTGLPSLT 338
+ST + S YSS ++S +S+S+ S S + T +PS++
Sbjct: 795 ISTSVSSQSSMNSSYSSPISSNSVTSSTSIISSIASSSYTSIPSIS 840
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 504 LRNSSSDGSRLTRSCLRCSIHSCLGISITR 415
LRN S+ S L + R +H+ LG++ITR
Sbjct: 635 LRNLSAKSSALEKDTRRVVLHALLGLTITR 664
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 28.3 bits (60), Expect = 1.5
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 548 ADHVGEHQRVAVQVHLNGGRDNCGEAVVEAPD 643
A+H+ E ++ + +NG DN G + +AP+
Sbjct: 411 AEHISEDEQASTATDVNGISDNNGSSTQQAPE 442
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 156 SPSSYQTPAGRYTSRLVAPSVSTGATRMFSPRRYSSQMTSASSSLGSIHQSGA 314
S SS +P+ T+ +PS S+ ++ S SS +S+SSS S S +
Sbjct: 137 SSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 189
>SPBC21H7.05 |sfc6||transcription factor TFIIIC complex subunit
Sfc6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 582
Score = 28.3 bits (60), Expect = 1.5
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 135 PSRTRDRSPSSYQTPAGRYTSRLVAPSVSTGATRMFSPRRYSSQMTSASS 284
PSR R R ++ +TP+ S+ + PS S GA P+ +S T S+
Sbjct: 42 PSRNRKRVSTTRRTPSKPIRSQPLTPSSSKGAGN--EPKSQNSSTTRGSA 89
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.9 bits (59), Expect = 1.9
Identities = 23/90 (25%), Positives = 40/90 (44%)
Frame = +3
Query: 51 AASGALTFSLTK*GSTSRGAGYALSQVGPSRTRDRSPSSYQTPAGRYTSRLVAPSVSTGA 230
+ S L+ S + STS + + S SPSS + ++ L +P+ ST +
Sbjct: 575 SVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSSTILSSPTPSTSS 634
Query: 231 TRMFSPRRYSSQMTSASSSLGSIHQSGALT 320
+ S S + SSS+ +I S +L+
Sbjct: 635 LMISSSSIISGSSSILSSSISTIPISSSLS 664
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 26.6 bits (56), Expect = 4.5
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -1
Query: 451 QYSFVPWNFDNETTEISRKYTDLHAAYADEIYAIMEASVKEGKPVNAPLWWIDPNDE 281
++ P + DN+TT+ + LHA + YAI + + +N L I+PN+E
Sbjct: 1908 KWDIPPLSLDNKTTKDCLVFEVLHAVHN---YAIYGNYLHLEEYINKKLLLINPNEE 1961
>SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 26.2 bits (55), Expect = 5.9
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 737 SGVRLNDEMRLEVDVSGLNRYLWC 808
+ +LN++ E D G N Y WC
Sbjct: 212 NATKLNNDTNSETDFLGYNMYEWC 235
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 26.2 bits (55), Expect = 5.9
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Frame = +3
Query: 93 STSRGAGYALSQVGPSRTRDRSPSSY------QTPAGRYTSRLVAPSVSTGATRMFSPRR 254
S S + + + PS R+ SSY TP+ +S +PS S+ + S
Sbjct: 120 SLSYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSS 179
Query: 255 YSSQMTSASSSLGS 296
SS +S SSS S
Sbjct: 180 SSSSSSSKSSSSSS 193
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 25.8 bits (54), Expect = 7.8
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 6/68 (8%)
Frame = -3
Query: 695 LQNPRPPDLRSHGRPRLHLGPQQRP------LHNCHDHHSDEPERLHAGAPRHDRRERLQ 534
L +P P R GRPRLH P +P N DEP + A H L+
Sbjct: 141 LDDPLKPK-RGRGRPRLHPLPVVQPSVDEGTTQNNLQMGLDEPNIIEGFAEGHANLSELK 199
Query: 533 LEPRPGRP 510
+ GRP
Sbjct: 200 PKRGRGRP 207
>SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr
1|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 7.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 162 SSYQTPAGRYTSRLVAPSVSTGATRMFSPRRYSSQMTSASSSL 290
S+ T + R S PS + ++FSP+ SS ASS++
Sbjct: 169 STKSTASQRRMSDSSTPSTTKSKEKIFSPKALSSPTQGASSNV 211
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,432,778
Number of Sequences: 5004
Number of extensions: 73216
Number of successful extensions: 258
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 422462090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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