Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16o08r
(853 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1108 - 27661916-27662812,27662889-27663529,27663613-276645... 68 8e-12
06_03_1114 + 27719099-27719252,27719340-27719570,27720508-277211... 66 4e-11
03_02_0168 + 6094658-6096220,6096335-6096608,6096671-6096821,609... 58 9e-09
01_01_0195 + 1697447-1697691,1698150-1698808,1699754-1701570,170... 56 4e-08
07_03_0108 + 13481249-13481464,13484556-13484693,13485320-134853... 54 1e-07
07_03_0104 + 13434954-13435145,13436220-13436288,13436386-134365... 54 1e-07
01_01_1161 + 9244628-9245748,9247696-9247828,9248233-9248448,924... 44 2e-04
04_04_1587 + 34630678-34632282 34 0.13
11_05_0087 + 18970741-18972702 31 0.88
02_02_0310 - 8842286-8843314 27 1.2
07_01_0664 + 4979892-4979931,4980040-4980236,4982340-4982723,498... 31 1.5
02_03_0243 - 16791789-16793306 31 1.5
05_03_0401 - 13529818-13529933,13530145-13530394 30 2.0
01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815... 30 2.0
10_07_0098 - 12844631-12845074,12845329-12846570 29 4.7
12_01_0272 + 1985348-1986036,1986142-1988020 29 6.2
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 29 6.2
05_04_0305 + 20052813-20053996,20055774-20055861,20056470-200565... 29 6.2
02_01_0725 - 5422477-5422641,5422721-5422792,5422876-5422958,542... 29 6.2
01_01_0005 + 21247-21294,22615-22847,22962-23033,23492-23577,244... 29 6.2
11_08_0027 + 27775552-27775770,27776437-27778483,27778589-27778965 28 8.2
10_01_0301 - 3319562-3320008 28 8.2
03_05_0136 + 21158917-21159939,21160183-21160241,21160259-211602... 28 8.2
03_04_0116 + 17406702-17409008,17409385-17409501,17409502-17409561 28 8.2
02_03_0074 + 14781763-14784191,14784888-14784978,14785180-147852... 28 8.2
>06_03_1108 - 27661916-27662812,27662889-27663529,27663613-27664592,
27664854-27664934,27668582-27668634,27669294-27669308,
27670069-27670296
Length = 964
Score = 68.1 bits (159), Expect = 8e-12
Identities = 46/145 (31%), Positives = 64/145 (44%), Gaps = 7/145 (4%)
Frame = -1
Query: 505 TKELFIRWVQANTFLPAMQYSFVPWNFDNE------TTEISRKYTDLHAAYADEIYAIME 344
T+EL RW+Q F P + E +RK L +Y +M
Sbjct: 657 TEELCSRWIQLGAFYPFSRDHSAIGTVRRELYLWESVARSARKALGLRYRLLPYLYTLMY 716
Query: 343 ASVKEGKPVNAPLWWIDPNDEEALVIWDEYLLGENILVAPVLTEGATSRDVYLPAGVWYE 164
+ G P+ PL++ P D E I ++LLG +LV+PVL GAT+ Y PAG W+
Sbjct: 717 EAHTTGAPIARPLFFSYPGDVETYGIDRQFLLGRGVLVSPVLEPGATTVTAYFPAGRWFS 776
Query: 163 EGDRSRVLEGPTWLR-AYPAPLDVL 92
D S + T R PAP D +
Sbjct: 777 LYDFSLAVATKTGKRVTLPAPADTV 801
>06_03_1114 +
27719099-27719252,27719340-27719570,27720508-27721148,
27721225-27722124
Length = 641
Score = 65.7 bits (153), Expect = 4e-11
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 7/145 (4%)
Frame = -1
Query: 505 TKELFIRWVQANTFLPAMQYSFVPWNFDNE------TTEISRKYTDLHAAYADEIYAIME 344
T+EL RW+Q F P + E +RK L +Y +M
Sbjct: 333 TEELCSRWIQLGAFYPFSRDHSAIGTVRRELYLWESVARSARKALGLRYRLLPYLYTLMY 392
Query: 343 ASVKEGKPVNAPLWWIDPNDEEALVIWDEYLLGENILVAPVLTEGATSRDVYLPAGVWYE 164
+ G P+ PL++ P D I ++LLG +LV+PVL GAT+ Y PAG W+
Sbjct: 393 EAHTTGAPIARPLFFSYPGDVATYGIDRQFLLGRGVLVSPVLEPGATTVTAYFPAGRWFS 452
Query: 163 EGDRSRVLEGPTWLR-AYPAPLDVL 92
D S + T R PAP D +
Sbjct: 453 LYDFSLAVATKTGKRVTLPAPADTV 477
>03_02_0168 + 6094658-6096220,6096335-6096608,6096671-6096821,
6097052-6097262,6097344-6097550,6097982-6098350
Length = 924
Score = 58.0 bits (134), Expect = 9e-09
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 10/163 (6%)
Frame = -1
Query: 622 LSTIVTTTIQMNLNGYTLVLPDMIGGN--GFNLNHDQADLPTKELFIRWVQANTFLPAMQ 449
L + + + + L G T + + G + GF N P +L +RW Q F P +
Sbjct: 594 LKSSIPMVLTLGLTGMTFSVGALTGADIGGFFGN------PEPDLLVRWYQVGAFYPFFR 647
Query: 448 YSF-------VPWNFDNETTEISRKYTDLHAAYADEIYAIMEASVKEGKPVNAPLWWIDP 290
PW F T + R+ + + Y + + G PV PLW P
Sbjct: 648 GHAHHDTKRREPWLFGERRTALMREAIHMRYSLLPYYYTLFREASVTGVPVMRPLWLEFP 707
Query: 289 NDEEALVIWDEYLLGENILVAPVLTEGATSRDVYLPA-GVWYE 164
+D+E + +++G ++L + EG S VYLP +WY+
Sbjct: 708 DDKETYNNGEAFMVGPSLLAQGIYEEGQKSVSVYLPGEELWYD 750
>01_01_0195 +
1697447-1697691,1698150-1698808,1699754-1701570,
1701700-1701771
Length = 930
Score = 56.0 bits (129), Expect = 4e-08
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Frame = -1
Query: 508 PTKELFIRWVQANTFLPAMQYSFVPWNFDNETTEI---------SRKYTDLHAAYADEIY 356
PT+EL RW++ F P +S NF + E+ +R + +Y
Sbjct: 609 PTEELCNRWIELGAFYP---FSRDHANFASPRQELYVWESVAKSARNALGMRYRLLPYLY 665
Query: 355 AIMEASVKEGKPVNAPLWWIDPNDEEALVIWDEYLLGENILVAPVLTEGATSRDVYLPAG 176
+ + G PV P+++ P+ + +YLLG +++V+PVL +GATS P G
Sbjct: 666 TLNYQAHLTGAPVARPVFFSFPDFTPCYGLSTQYLLGASVMVSPVLEQGATSVSAMFPPG 725
Query: 175 VWYEEGDRSRVL 140
WY D ++V+
Sbjct: 726 SWYNLFDTTKVV 737
>07_03_0108 +
13481249-13481464,13484556-13484693,13485320-13485388,
13485462-13485599,13485685-13485802,13486265-13486347,
13486921-13487013,13487801-13487969,13488056-13488129,
13488448-13488633,13490009-13490101,13490469-13490534,
13490618-13490785,13491199-13491319,13492072-13492141,
13492389-13492476,13492565-13492685,13492964-13493157,
13493239-13493347,13493488-13493643,13493858-13493957,
13494115-13494288,13494549-13494694,13494796-13494860,
13495013-13495018
Length = 986
Score = 54.0 bits (124), Expect = 1e-07
Identities = 45/158 (28%), Positives = 64/158 (40%), Gaps = 10/158 (6%)
Frame = -1
Query: 598 IQMNLNGYTLVLPDMIGGNGFNLNHDQADLPTKELFIRWVQANTFLPAMQ-------YSF 440
+ + L+G PD IGG N T +LF RW+ P +
Sbjct: 479 VDLGLSGQPFAGPD-IGGFAGNA--------TPKLFGRWMGVGALFPFSRGHSDKGSLDH 529
Query: 439 VPWNFDNETTEISRKYTDLHAAYADEIYAIMEASVKEGKPVNAPLWWIDPNDEEALVIWD 260
PW+F E E+ R IY + S G PV AP+++ DP D E I
Sbjct: 530 EPWSFGEECEEVCRLALLRRYRLLPHIYTLFYLSHTNGTPVAAPVYFADPQDLELRKIET 589
Query: 259 EYLLGENILVAPVLTE-GATSRDVYLPAGVW--YEEGD 155
+LLG ++ A + GA LP G+W ++ GD
Sbjct: 590 SFLLGSLLVCASTCPDKGAHESSQKLPKGIWLPFDFGD 627
>07_03_0104 +
13434954-13435145,13436220-13436288,13436386-13436523,
13436612-13436729,13437214-13437296,13438305-13438400,
13438552-13438720,13438798-13438940,13439027-13439113,
13439197-13439382,13439956-13440123,13441028-13441148,
13441453-13441522,13441694-13441781,13441866-13442018
Length = 626
Score = 54.0 bits (124), Expect = 1e-07
Identities = 48/162 (29%), Positives = 68/162 (41%), Gaps = 10/162 (6%)
Frame = -1
Query: 610 VTTTIQMNLNGYTLVLPDMIGGNGFNLNHDQADLPTKELFIRWVQANTFLPAMQ------ 449
V +Q+ L+G L PD IGG N T +LF RW+ P +
Sbjct: 421 VPMVLQLGLSGQPLSGPD-IGGFAGNA--------TPKLFGRWMGLGALFPFSRGHTETG 471
Query: 448 -YSFVPWNFDNETTEISRKYTDLHAAYADEIYAIMEASVKEGKPVNAPLWWIDPNDEEAL 272
PW+F E E+ R IY + S +G PV AP+++ DP D E
Sbjct: 472 SIDHEPWSFGEECEEVCRLALLRRYRLLPHIYTLFYFSHMKGTPVAAPVFFADPQDPELR 531
Query: 271 VIWDEYLLGENILVAPVLTE-GATSRDVYLPAGVW--YEEGD 155
I +LLG ++ A + + GA LP G W ++ GD
Sbjct: 532 KIETSFLLGPLLVCASTVPDKGAHECSHKLPKGNWLPFDFGD 573
>01_01_1161 + 9244628-9245748,9247696-9247828,9248233-9248448,
9249802-9249957,9250788-9250979,9251118-9251234,
9251822-9252193
Length = 768
Score = 43.6 bits (98), Expect = 2e-04
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 23/150 (15%)
Frame = -1
Query: 550 GGNGFNLNHDQA------DLP------TKELFIRWVQANTFLPAMQY-------SFVPWN 428
G +GF LNH A DLP ++EL +RW++ + F + S +
Sbjct: 558 GMSGFPLNHGDAGGYCTVDLPLLRYRRSEELLLRWLELSAFTVVFRTHEGNKPGSNCQFY 617
Query: 427 FDNETTEISRKYTDLHAAYADEIYAIMEASVKEGKPVNAPLWWIDPNDEEAL-VIWDEYL 251
+N T + ++ A+ ++E + ++G PV L+ P D+ + + ++L
Sbjct: 618 SNNRTLAHFARCAKIYKAWEFYRIQLVEEAAEKGLPVARHLFLHYPEDQRVQKMTYQQFL 677
Query: 250 LGENILVAPVLTEGATSRDVYLP---AGVW 170
+G +LV PVL +G ++ Y P G+W
Sbjct: 678 VGTEMLVVPVLDKGRSTVTAYFPMSDGGLW 707
>04_04_1587 + 34630678-34632282
Length = 534
Score = 34.3 bits (75), Expect = 0.13
Identities = 26/106 (24%), Positives = 46/106 (43%)
Frame = +3
Query: 195 SRLVAPSVSTGATRMFSPRRYSSQMTSASSSLGSIHQSGALTGLPSLTDXXXXXXXXXXX 374
+R + + S+ + +F PR+ S +S G++ + GA L L
Sbjct: 374 ARRLTKNASSDMSVIFLPRQLQHLDLSKNSITGALPEFGAGASLRWLDVSGNAIGGQIPS 433
Query: 375 XXWRSVYFRLISVVSLSKFQGTNEYCIAGRNVLAWTHLMKSSLVGR 512
WR V + + + S +K +GT +A L W + ++LVGR
Sbjct: 434 SVWRLVGLQRLDI-SRNKIRGTIPASVASMASLRWLDISGNALVGR 478
>11_05_0087 + 18970741-18972702
Length = 653
Score = 31.5 bits (68), Expect = 0.88
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = -3
Query: 653 PRLHL-GPQQRPLHNCHDHHSDE----PERLHAGAPRHDRRERLQ 534
P+LH+ +RPLH H HH + E AG+PRH R + ++
Sbjct: 51 PQLHVVRAPRRPLHGRHGHHREHRRGADELEPAGSPRHHRGQSVR 95
>02_02_0310 - 8842286-8843314
Length = 342
Score = 27.5 bits (58), Expect(2) = 1.2
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = -3
Query: 608 HDHHSDEPERLHAGAP----RHDRRERLQLEPRPGRPAH 504
H HH D+ E+ GAP RH E + E R R H
Sbjct: 229 HHHHEDDHEQREEGAPMKRFRHHHEEEEESEMRTKRFHH 267
Score = 22.2 bits (45), Expect(2) = 1.2
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = -3
Query: 650 RLHLGPQQRPLHN-CHDHHSDEPE 582
RLH G + H+ H HH DE E
Sbjct: 179 RLHHGRRSHHHHHRHHHHHHDENE 202
>07_01_0664 +
4979892-4979931,4980040-4980236,4982340-4982723,
4983499-4983549,4983659-4983741,4983818-4983917,
4984410-4984488,4984957-4985080,4985605-4985711,
4985810-4985938,4987004-4987089,4987200-4987367,
4987477-4987637,4987721-4987752,4987866-4988047,
4988386-4988465,4988885-4988950,4989060-4989349,
4990433-4990540,4991521-4991618,4991680-4991782,
4992269-4992345,4992449-4992520,4992579-4992670,
4992909-4992989,4993290-4993392,4994334-4994492,
4994696-4995085
Length = 1213
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +3
Query: 108 AGYALSQVGPSRTRDRSPSSYQTPAGRYTSRLVAPSVSTGATRMFSPRRYSSQMTSASSS 287
A A + V + + S SS AG ++PS GA++++ PR Y++ +S+SSS
Sbjct: 95 AAAAPAVVAAASSPASSTSSSADFAGGVERMTISPSPQGGASQVWVPRGYATSASSSSSS 154
>02_03_0243 - 16791789-16793306
Length = 505
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +3
Query: 36 RQGAVAASGALTFSLTK*GSTSRGAGYALSQVGPSRTRDRSP----SSYQTPAGRYTSRL 203
+ GA++ + AL ++ S RG+G A ++ PSR R R P Y + AG RL
Sbjct: 428 KTGAMSVAAALRWASLCRRSGWRGSGGASAKTSPSRGRRRDPVISGIEYMSIAGPPNGRL 487
Query: 204 VA 209
VA
Sbjct: 488 VA 489
>05_03_0401 - 13529818-13529933,13530145-13530394
Length = 121
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 390 LTSTRRTLMKFTPSWRRPLRKASRSTPRSGGSILMMKRHLSFGMS 256
LTS R + P W R S +P S GS L+++ HL + S
Sbjct: 36 LTSNGRQIYTRAPFWAREYLMESSQSPLSNGSSLILEFHLIWPQS 80
>01_06_0213 +
27580635-27581105,27581206-27581298,27581376-27581540,
27581640-27581862,27582329-27582429,27582666-27582713,
27583086-27583172,27583745-27583879,27583985-27584140,
27585336-27585545,27585641-27586351,27586429-27586974,
27587872-27588495,27588595-27588699,27590460-27590711,
27590939-27591766
Length = 1584
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 77 SHEVGQHIQRRRVRSQPGRTFQDPRSVSFFIPDAGRK 187
SH G H+ R + PG FQ S S +P +GR+
Sbjct: 60 SHTPGSHLLRGSDEAAPGYAFQGQMSGSGHLPQSGRR 96
>10_07_0098 - 12844631-12845074,12845329-12846570
Length = 561
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -1
Query: 394 YTDLHAAYADEIYAIMEASVKEGKPVNAPLWWIDP 290
YT+ +YA E + K+G +N WW P
Sbjct: 277 YTENEGVMMTGVYASKEEAKKKGNKINCVGWWFKP 311
>12_01_0272 + 1985348-1986036,1986142-1988020
Length = 855
Score = 28.7 bits (61), Expect = 6.2
Identities = 27/113 (23%), Positives = 43/113 (38%)
Frame = -1
Query: 343 ASVKEGKPVNAPLWWIDPNDEEALVIWDEYLLGENILVAPVLTEGATSRDVYLPAGVWYE 164
A ++E P D D E +WDE L + +L+ L T + P G ++
Sbjct: 666 APLEEDAGERLPHTAADGGDGEPRDLWDE-KLPKYLLLLAALAAAVTYQAAMSPPGGLWD 724
Query: 163 EGDRSRVLEGPTWLRAYPAPLDVLPYFVREKVNAPDAATAPCLSALLLILAIN 5
+G ++ P L Y V Y NA + + LLLI ++
Sbjct: 725 DGQTEHIVGDPVLLTNYARRYKVFFY-----CNATSFMASLVIMVLLLIKRVS 772
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Frame = +3
Query: 45 AVAASGALTFSLTK*GSTSRGAGYALSQVGPSRTRDRSPSSYQ---TPAGRYTSRLVAPS 215
A + AL + LT+ S+G +A + S + Y GR ++ A S
Sbjct: 157 AAVLAAALVYLLTRRRRCSKGEPHAAHTKAVLLSPGNSTALYDGDHDQHGRGSTATAASS 216
Query: 216 VSTGATRMFSP--RRYSSQMTSASSSLGSIHQSGA 314
S+ R P R++ TS S+ +IH++GA
Sbjct: 217 ASSPELRPMPPLPRQFQQTRTSMPSTSQTIHEAGA 251
>05_04_0305 +
20052813-20053996,20055774-20055861,20056470-20056522,
20056585-20056615
Length = 451
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 225 PCSRKAPPVATCTFLPASG 169
PC + P + TCTFLP +G
Sbjct: 399 PCLEEQPNMRTCTFLPRAG 417
>02_01_0725 -
5422477-5422641,5422721-5422792,5422876-5422958,
5423113-5423173,5423305-5423381,5423456-5423522,
5423770-5423803,5423894-5423974,5424285-5424436,
5424529-5424615,5425019-5425126,5425906-5426259
Length = 446
Score = 28.7 bits (61), Expect = 6.2
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 608 DNCGEAVVEAPDGVAVYHANEDREVLGSEARSDFDHATEPR-AGSGVRLNDEMRLEVDVS 784
+ CG V+EA D A EV G D H T+P+ G G L M+ +D S
Sbjct: 264 EGCGVMVLEALDHAKERGAKIYAEVRGYGMSGDAHHITQPQNDGRGATL--AMKRALDQS 321
Query: 785 GL 790
GL
Sbjct: 322 GL 323
>01_01_0005 +
21247-21294,22615-22847,22962-23033,23492-23577,
24445-24519,24883-25391
Length = 340
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -1
Query: 469 TFLPAMQYSFVPWNFDNETTE----ISRKYTDLHAAYADEIYAIMEASVKEGK 323
T +P + S V W +DN+ T + RK TDL A+ ++ + A + K
Sbjct: 116 TAIPPVLVSDVLWEYDNKDTSTSVVVKRKDTDLEEAWKEDAQENISAEISHLK 168
>11_08_0027 + 27775552-27775770,27776437-27778483,27778589-27778965
Length = 880
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = -1
Query: 658 VDRDSIWGLNNGLSTIVT----TTIQMNLNGYTLVLPDMIG 548
V ++++ G N LST+ +T+QM+LN T +LPD +G
Sbjct: 210 VTKNNLHGDLNFLSTVSNCRKLSTLQMDLNYITGILPDYVG 250
>10_01_0301 - 3319562-3320008
Length = 148
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 236 PSRTRAHGRRHQSRRVPSCRR 174
PSR RAHGRR+ +P+C R
Sbjct: 9 PSR-RAHGRRYYPESIPTCPR 28
>03_05_0136 +
21158917-21159939,21160183-21160241,21160259-21160294,
21160345-21160387,21160582-21160698,21162090-21162179,
21162329-21162436,21162547-21162588
Length = 505
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +3
Query: 93 STSRGAGYALSQVGPSRTRDRSPSSYQTPAGRYTSRLVAPSVSTGATRMFSPRRYSSQMT 272
S R + PS R PSS + +G ++R +PS S+ A +P SS T
Sbjct: 37 SARRSPAVSRPDPAPSIARTIWPSSSSSNSGNTSTRKASPSPSSPAPAASTPSSSSSVAT 96
Query: 273 SASSSL 290
+ + L
Sbjct: 97 TLADHL 102
>03_04_0116 + 17406702-17409008,17409385-17409501,17409502-17409561
Length = 827
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 598 IQMNLNGYTLVLPDMIGGNGFNLNHDQADLPTKELF 491
I MN++G + +++ +LN DQ D T+ELF
Sbjct: 411 ISMNISGMPVSQSNVLDSRKHSLNCDQMDEKTRELF 446
>02_03_0074 +
14781763-14784191,14784888-14784978,14785180-14785230,
14785882-14785947,14786509-14786610
Length = 912
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 653 PRLHLGPQQRPLHNCHDHHSDEPERLHAGAPRHDRRE 543
P H PQQ H+ H HHS +R H+ P + E
Sbjct: 157 PHHHSQPQQPQSHHHHHHHSGSRKR-HSMPPAYTAAE 192
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,232,371
Number of Sequences: 37544
Number of extensions: 598701
Number of successful extensions: 2000
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1989
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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