Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16o08f
(746 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110493-1|AAI10494.1| 680|Homo sapiens KIAA1161 protein protein. 53 1e-06
BC070098-1|AAH70098.1| 714|Homo sapiens KIAA1161 protein. 53 1e-06
AL356494-2|CAI15965.1| 680|Homo sapiens KIAA1161 protein. 53 1e-06
AB032987-1|BAA86475.2| 680|Homo sapiens KIAA1161 protein protein. 53 1e-06
X65644-1|CAA46596.1| 2500|Homo sapiens MBP-2 (MHC Binding Protei... 36 0.15
M60119-1|AAB88218.1| 1833|Homo sapiens HIV-EP2/Schnurri-2 protein. 36 0.15
AL023584-1|CAA19042.1| 2446|Homo sapiens human immunodeficiency ... 36 0.15
AF153836-1|AAF81365.1| 2446|Homo sapiens human immunodeficiency ... 36 0.15
DQ231041-1|ABB16331.1| 2446|Homo sapiens c-myc intron-binding pr... 36 0.20
>BC110493-1|AAI10494.1| 680|Homo sapiens KIAA1161 protein protein.
Length = 680
Score = 53.2 bits (122), Expect = 1e-06
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Frame = +2
Query: 338 KFKWN-ATPQTRLEDCIDFG--SKHWYAGPMQVDQIYPVQLAEQR----YSASIIKENDN 496
+ +W A P +E + G + HWY G Q +P++L Q+ + S + +D
Sbjct: 126 RVRWEEAAPGRAVEHAMFLGDAAAHWYGGAEMRTQHWPIRLDGQQEPQPFVTSDVYSSDA 185
Query: 497 --GAIAERYWLNSAGEYVYVHPDVPLFVDYHNLSPNHLCFGAQIAE-PY---SSRRTHTV 658
G I ERYWL+S + V+ VP + + N + L A+ + PY + R
Sbjct: 186 AFGGILERYWLSSRAAAIKVNDSVPFHLGW-NSTERSLRLQARYHDTPYKPPAGRAAAPE 244
Query: 659 LAYDVWFLSNVKKAHKHAVANYLGQPS 739
L+Y V S+V HK+ V Y +PS
Sbjct: 245 LSYRVCVGSDVTSIHKYMVRRYFNKPS 271
>BC070098-1|AAH70098.1| 714|Homo sapiens KIAA1161 protein.
Length = 714
Score = 53.2 bits (122), Expect = 1e-06
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Frame = +2
Query: 338 KFKWN-ATPQTRLEDCIDFG--SKHWYAGPMQVDQIYPVQLAEQR----YSASIIKENDN 496
+ +W A P +E + G + HWY G Q +P++L Q+ + S + +D
Sbjct: 160 RVRWEEAAPGRAVEHAMFLGDAAAHWYGGAEMRTQHWPIRLDGQQEPQPFVTSDVYSSDA 219
Query: 497 --GAIAERYWLNSAGEYVYVHPDVPLFVDYHNLSPNHLCFGAQIAE-PY---SSRRTHTV 658
G I ERYWL+S + V+ VP + + N + L A+ + PY + R
Sbjct: 220 AFGGILERYWLSSRAAAIKVNDSVPFHLGW-NSTERSLRLQARYHDTPYKPPAGRAAAPE 278
Query: 659 LAYDVWFLSNVKKAHKHAVANYLGQPS 739
L+Y V S+V HK+ V Y +PS
Sbjct: 279 LSYRVCVGSDVTSIHKYMVRRYFNKPS 305
>AL356494-2|CAI15965.1| 680|Homo sapiens KIAA1161 protein.
Length = 680
Score = 53.2 bits (122), Expect = 1e-06
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Frame = +2
Query: 338 KFKWN-ATPQTRLEDCIDFG--SKHWYAGPMQVDQIYPVQLAEQR----YSASIIKENDN 496
+ +W A P +E + G + HWY G Q +P++L Q+ + S + +D
Sbjct: 126 RVRWEEAAPGRAVEHAMFLGDAAAHWYGGAEMRTQHWPIRLDGQQEPQPFVTSDVYSSDA 185
Query: 497 --GAIAERYWLNSAGEYVYVHPDVPLFVDYHNLSPNHLCFGAQIAE-PY---SSRRTHTV 658
G I ERYWL+S + V+ VP + + N + L A+ + PY + R
Sbjct: 186 AFGGILERYWLSSRAAAIKVNDSVPFHLGW-NSTERSLRLQARYHDTPYKPPAGRAAAPE 244
Query: 659 LAYDVWFLSNVKKAHKHAVANYLGQPS 739
L+Y V S+V HK+ V Y +PS
Sbjct: 245 LSYRVCVGSDVTSIHKYMVRRYFNKPS 271
>AB032987-1|BAA86475.2| 680|Homo sapiens KIAA1161 protein protein.
Length = 680
Score = 53.2 bits (122), Expect = 1e-06
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Frame = +2
Query: 338 KFKWN-ATPQTRLEDCIDFG--SKHWYAGPMQVDQIYPVQLAEQR----YSASIIKENDN 496
+ +W A P +E + G + HWY G Q +P++L Q+ + S + +D
Sbjct: 126 RVRWEEAAPGRAVEHAMFLGDAAAHWYGGAEMRTQHWPIRLDGQQEPQPFVTSDVYSSDA 185
Query: 497 --GAIAERYWLNSAGEYVYVHPDVPLFVDYHNLSPNHLCFGAQIAE-PY---SSRRTHTV 658
G I ERYWL+S + V+ VP + + N + L A+ + PY + R
Sbjct: 186 AFGGILERYWLSSRAAAIKVNDSVPFHLGW-NSTERSLRLQARYHDTPYKPPAGRAAAPE 244
Query: 659 LAYDVWFLSNVKKAHKHAVANYLGQPS 739
L+Y V S+V HK+ V Y +PS
Sbjct: 245 LSYRVCVGSDVTSIHKYMVRRYFNKPS 271
>X65644-1|CAA46596.1| 2500|Homo sapiens MBP-2 (MHC Binding Protein-2)
protein.
Length = 2500
Score = 35.9 bits (79), Expect = 0.15
Identities = 34/111 (30%), Positives = 46/111 (41%)
Frame = +3
Query: 303 PYSMMPLVLEALSLSGTPLRRQDSKTALILDRSTGTPVPCKWTKYIPYNWPSSVIPRRLS 482
P +PL +E SK +L + P P + PSS PR L
Sbjct: 2303 PSPTLPLPMEGFEEKKGASGESFSKDPYVLSKQHEKRGPHALQSSGPPSTPSS--PRLLM 2360
Query: 483 KKTTTVQSLNDTGSILPENTFTCTLMYHCSLTITTFHLITSVLEPKSPSRI 635
K++T+ SLN T EN TCT SL I T ++L P P+R+
Sbjct: 2361 KQSTSEDSLNATEREQEENIQTCTKAI-ASLRIATEE--AALLGPDQPARV 2408
>M60119-1|AAB88218.1| 1833|Homo sapiens HIV-EP2/Schnurri-2 protein.
Length = 1833
Score = 35.9 bits (79), Expect = 0.15
Identities = 34/111 (30%), Positives = 46/111 (41%)
Frame = +3
Query: 303 PYSMMPLVLEALSLSGTPLRRQDSKTALILDRSTGTPVPCKWTKYIPYNWPSSVIPRRLS 482
P +PL +E SK +L + P P + PSS PR L
Sbjct: 1636 PSPTLPLPMEGFEEKKGASGESFSKDPYVLSKQHEKRGPHALQSSGPPSTPSS--PRLLM 1693
Query: 483 KKTTTVQSLNDTGSILPENTFTCTLMYHCSLTITTFHLITSVLEPKSPSRI 635
K++T+ SLN T EN TCT SL I T ++L P P+R+
Sbjct: 1694 KQSTSEDSLNATEREQEENIQTCTKAI-ASLRIATEE--AALLGPDQPARV 1741
>AL023584-1|CAA19042.1| 2446|Homo sapiens human immunodeficiency virus
type I enhancer binding protein 2 protein.
Length = 2446
Score = 35.9 bits (79), Expect = 0.15
Identities = 34/111 (30%), Positives = 46/111 (41%)
Frame = +3
Query: 303 PYSMMPLVLEALSLSGTPLRRQDSKTALILDRSTGTPVPCKWTKYIPYNWPSSVIPRRLS 482
P +PL +E SK +L + P P + PSS PR L
Sbjct: 2249 PSPTLPLPMEGFEEKKGASGESFSKDPYVLSKQHEKRGPHALQSSGPPSTPSS--PRLLM 2306
Query: 483 KKTTTVQSLNDTGSILPENTFTCTLMYHCSLTITTFHLITSVLEPKSPSRI 635
K++T+ SLN T EN TCT SL I T ++L P P+R+
Sbjct: 2307 KQSTSEDSLNATEREQEENIQTCTKAI-ASLRIATEE--AALLGPDQPARV 2354
>AF153836-1|AAF81365.1| 2446|Homo sapiens human immunodeficiency virus
type I enhancer-binding protein 2 protein.
Length = 2446
Score = 35.9 bits (79), Expect = 0.15
Identities = 34/111 (30%), Positives = 46/111 (41%)
Frame = +3
Query: 303 PYSMMPLVLEALSLSGTPLRRQDSKTALILDRSTGTPVPCKWTKYIPYNWPSSVIPRRLS 482
P +PL +E SK +L + P P + PSS PR L
Sbjct: 2249 PSPTLPLPMEGFEEKKGASGESFSKDPYVLSKQHEKRGPHALQSSGPPSTPSS--PRLLM 2306
Query: 483 KKTTTVQSLNDTGSILPENTFTCTLMYHCSLTITTFHLITSVLEPKSPSRI 635
K++T+ SLN T EN TCT SL I T ++L P P+R+
Sbjct: 2307 KQSTSEDSLNATEREQEENIQTCTKAI-ASLRIATEE--AALLGPDQPARV 2354
>DQ231041-1|ABB16331.1| 2446|Homo sapiens c-myc intron-binding protein
1 protein.
Length = 2446
Score = 35.5 bits (78), Expect = 0.20
Identities = 34/111 (30%), Positives = 46/111 (41%)
Frame = +3
Query: 303 PYSMMPLVLEALSLSGTPLRRQDSKTALILDRSTGTPVPCKWTKYIPYNWPSSVIPRRLS 482
P +PL +E SK +L + P P + PSS PR L
Sbjct: 2249 PSPTLPLPMEGFEEKKGASGESFSKDPYVLSKQHVKRGPHALQSSGPPSTPSS--PRLLM 2306
Query: 483 KKTTTVQSLNDTGSILPENTFTCTLMYHCSLTITTFHLITSVLEPKSPSRI 635
K++T+ SLN T EN TCT SL I T ++L P P+R+
Sbjct: 2307 KQSTSEDSLNATEREQEENIQTCTKAI-ASLRIATEE--AALLGPDQPARV 2354
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,856,171
Number of Sequences: 237096
Number of extensions: 2478116
Number of successful extensions: 5216
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5207
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -