Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16o08f
         (746 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023924-1|ABB36428.1|  657|Drosophila melanogaster RE74917p pro...   104   1e-22
AE014297-3790|AAF56462.1|  657|Drosophila melanogaster CG11909-P...   104   1e-22
BT003459-1|AAO39462.1|  925|Drosophila melanogaster RH30917p pro...    34   0.24 
AE014298-780|AAF46066.2|  725|Drosophila melanogaster CG33080-PB...    34   0.24 
AE014298-779|AAF46068.2|  925|Drosophila melanogaster CG33080-PA...    34   0.24 

>BT023924-1|ABB36428.1|  657|Drosophila melanogaster RE74917p
           protein.
          Length = 657

 Score =  104 bits (250), Expect = 1e-22
 Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
 Frame = +2

Query: 365 TRLEDCIDF--GSKHWYAGPMQVDQIYPVQLAEQRYSASIIKENDNGAIAERYWLNSAGE 538
           T+  DC+    GS HW++GP Q    +PV+       + + KE DN  + ERYWLN  G 
Sbjct: 119 TQPRDCVPLKTGSTHWFSGPEQKQHYWPVERQRHSNYSYLPKELDNFGVGERYWLNGDGV 178

Query: 539 YVYVHPDVPLFVDYHNLS-PNHLCFGAQIAEPYSSRRTHTVLAYDVWFLSNVKKAHKHAV 715
           ++YV  + PLF+D ++ + P+ LC  A  A PY  R T     Y V    + K AH++AV
Sbjct: 179 FLYVESNTPLFIDQNSAAYPDQLCLSAISALPYDPRVTSAKFVYHVAVAKDAKAAHRYAV 238

Query: 716 ANYLGQPSG 742
             +LGQP+G
Sbjct: 239 KTFLGQPTG 247


>AE014297-3790|AAF56462.1|  657|Drosophila melanogaster CG11909-PA
           protein.
          Length = 657

 Score =  104 bits (250), Expect = 1e-22
 Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
 Frame = +2

Query: 365 TRLEDCIDF--GSKHWYAGPMQVDQIYPVQLAEQRYSASIIKENDNGAIAERYWLNSAGE 538
           T+  DC+    GS HW++GP Q    +PV+       + + KE DN  + ERYWLN  G 
Sbjct: 119 TQPRDCVPLKTGSTHWFSGPEQKQHYWPVERQRHSNYSYLPKELDNFGVGERYWLNGDGV 178

Query: 539 YVYVHPDVPLFVDYHNLS-PNHLCFGAQIAEPYSSRRTHTVLAYDVWFLSNVKKAHKHAV 715
           ++YV  + PLF+D ++ + P+ LC  A  A PY  R T     Y V    + K AH++AV
Sbjct: 179 FLYVESNTPLFIDQNSAAYPDQLCLSAISALPYDPRVTSAKFVYHVAVAKDAKAAHRYAV 238

Query: 716 ANYLGQPSG 742
             +LGQP+G
Sbjct: 239 KTFLGQPTG 247


>BT003459-1|AAO39462.1|  925|Drosophila melanogaster RH30917p
           protein.
          Length = 925

 Score = 33.9 bits (74), Expect = 0.24
 Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
 Frame = +2

Query: 296 VHTLFDDASGARGIKFKWNA-TPQTRLEDCIDFGSKH--WYAGPMQVDQIYPVQLAE--- 457
           +H  F+D    R    +W A TP     DC +    +  W+ G +   Q + +  A    
Sbjct: 344 LHLNFEDKGVFRCYTLQWQALTPGLLPTDCYELKRDNGLWFGGGVTKGQEWSLSYANFDF 403

Query: 458 QRYSASIIKENDNGAIAERYWLNSAGEYVYVHPDVPLFVDYHNLSPNHLCFGA 616
             Y++   K +  G   +RY++NS G  + V    PL +   N + N  C  A
Sbjct: 404 APYASGDSKIHQFGNGVKRYFINSIGVAMQVSEKTPLQLGV-NRTENRFCLRA 455


>AE014298-780|AAF46066.2|  725|Drosophila melanogaster CG33080-PB,
           isoform B protein.
          Length = 725

 Score = 33.9 bits (74), Expect = 0.24
 Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
 Frame = +2

Query: 296 VHTLFDDASGARGIKFKWNA-TPQTRLEDCIDFGSKH--WYAGPMQVDQIYPVQLAE--- 457
           +H  F+D    R    +W A TP     DC +    +  W+ G +   Q + +  A    
Sbjct: 144 LHLNFEDKGVFRCYTLQWQALTPGLLPTDCYELKRDNGLWFGGGVTKGQEWSLSYANFDF 203

Query: 458 QRYSASIIKENDNGAIAERYWLNSAGEYVYVHPDVPLFVDYHNLSPNHLCFGA 616
             Y++   K +  G   +RY++NS G  + V    PL +   N + N  C  A
Sbjct: 204 APYASGDSKIHQFGNGVKRYFINSIGVAMQVSEKTPLQLGV-NRTENRFCLRA 255


>AE014298-779|AAF46068.2|  925|Drosophila melanogaster CG33080-PA,
           isoform A protein.
          Length = 925

 Score = 33.9 bits (74), Expect = 0.24
 Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
 Frame = +2

Query: 296 VHTLFDDASGARGIKFKWNA-TPQTRLEDCIDFGSKH--WYAGPMQVDQIYPVQLAE--- 457
           +H  F+D    R    +W A TP     DC +    +  W+ G +   Q + +  A    
Sbjct: 344 LHLNFEDKGVFRCYTLQWQALTPGLLPTDCYELKRDNGLWFGGGVTKGQEWSLSYANFDF 403

Query: 458 QRYSASIIKENDNGAIAERYWLNSAGEYVYVHPDVPLFVDYHNLSPNHLCFGA 616
             Y++   K +  G   +RY++NS G  + V    PL +   N + N  C  A
Sbjct: 404 APYASGDSKIHQFGNGVKRYFINSIGVAMQVSEKTPLQLGV-NRTENRFCLRA 455


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,210,075
Number of Sequences: 53049
Number of extensions: 763867
Number of successful extensions: 2510
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2508
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)