Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16o07f
         (811 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1125 + 31085106-31085714                                         30   2.5  
02_03_0235 - 16702768-16702956,16703956-16704492,16705084-167052...    29   4.4  
04_03_0857 + 20352331-20352582,20352740-20352951,20353047-203533...    29   5.8  
11_04_0137 + 13909204-13909315,13910002-13910999,13911058-139112...    28   7.6  
04_04_0239 - 23843235-23843243,23843334-23844047,23844138-238442...    28   7.6  
04_03_0858 + 20357519-20357573,20358072-20358119,20360675-203609...    28   7.6  

>04_04_1125 + 31085106-31085714
          Length = 202

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/50 (32%), Positives = 16/50 (32%)
 Frame = -2

Query: 630 PPNSRPAFPTT*APKLKPAKCMLEKAAPVAWLRKVKNCPTARPTPGTPLT 481
           PP   PA PTT      P         P  W       P    TP TP T
Sbjct: 48  PPTPTPATPTTPPTPWTPPPATPTPPTPTPWTPTPATPPPTPATPATPTT 97


>02_03_0235 -
           16702768-16702956,16703956-16704492,16705084-16705233,
           16705310-16705625,16707005-16707286,16707895-16707971,
           16708121-16708186,16708700-16709246,16709435-16709565,
           16709642-16709746,16709859-16710039,16710123-16710185,
           16711000-16711109,16711576-16711638,16711859-16712191
          Length = 1049

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
 Frame = +2

Query: 632 RVARITGLDPAGP--LWNTNSNRLRPGDGVYVEAIHTDGSTSGLGNGICY 775
           R  R+ GL+ AG   L      + +      +E IH D    G+ NG+CY
Sbjct: 750 RRVRLLGLEGAGKTSLLKALLGQFKERSKAVLECIHVDLHGKGVSNGLCY 799


>04_03_0857 +
           20352331-20352582,20352740-20352951,20353047-20353308,
           20353418-20353726
          Length = 344

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 569 HLAGFSLGAHVVGNAGRELGGRVARITGLDPAGPLW 676
           +L GFS+G  ++ +  + +  R+A +  L P G  W
Sbjct: 134 YLMGFSMGGEIMWSCLKHISHRLAGVAILGPVGNYW 169


>11_04_0137 +
           13909204-13909315,13910002-13910999,13911058-13911267,
           13911522-13912056,13912154-13912461
          Length = 720

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -2

Query: 711 PSPGLRRFELVFHRGPAGSNPVMRATLPPNSRPAFPTT*APK 586
           PSP L R   V   GP+ S     A    + RP+F  T AP+
Sbjct: 504 PSPPLPRRSSVDRSGPSSSRRGYEAAHTSHDRPSFQLTPAPE 545


>04_04_0239 -
           23843235-23843243,23843334-23844047,23844138-23844287,
           23844389-23844601,23844697-23844811,23844919-23846300,
           23847217-23847279
          Length = 881

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -3

Query: 239 IDWHYSCSPYPAGRSQVRLQDLLCEDCLHHQGYPYNVDT 123
           +D H S S    G   V L D+  +   H  GYPY VDT
Sbjct: 228 LDMHNSGSTKSLGLKGVLLDDIKAQ-AEHVSGYPYYVDT 265


>04_03_0858 +
           20357519-20357573,20358072-20358119,20360675-20360922,
           20361152-20361363,20361480-20361741,20361832-20362143
          Length = 378

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 569 HLAGFSLGAHVVGNAGRELGGRVARITGLDPAGPLW 676
           +L GFS+G  ++ +  + +  R+A +  L P G  W
Sbjct: 167 YLMGFSMGGEIMWSCLKHISHRLAGVAILAPVGNYW 202


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,970,494
Number of Sequences: 37544
Number of extensions: 505136
Number of successful extensions: 1404
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1404
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)