Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16o02f
(739 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0140 + 5864612-5864955,5865154-5865381,5865460-5865814,586... 305 3e-83
09_02_0577 - 10862976-10863215,10863653-10863788,10863906-108640... 293 1e-79
09_02_0576 - 10853361-10853600,10854033-10854168,10854285-108544... 293 1e-79
03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598 235 3e-62
09_04_0704 + 19623046-19623386,19623583-19623792,19623872-196242... 137 1e-32
12_02_1195 + 26906814-26907121,26907771-26907992,26908913-269091... 132 4e-31
12_02_1087 - 25949878-25950369,25950386-25950944,25950988-25951388 106 2e-23
12_02_1184 + 26785739-26786113 65 5e-11
12_02_1185 + 26786543-26786545,26786676-26786686,26787032-267872... 62 3e-10
12_02_1183 - 26764883-26765174,26765559-26765677 62 3e-10
02_01_0240 - 1593186-1593323,1593380-1593406 31 1.3
06_02_0364 + 15178583-15178881,15179652-15179723,15179853-151799... 29 2.9
06_01_0476 - 3388176-3389267 28 6.7
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941... 28 8.9
12_01_0384 + 3012359-3012404,3012641-3012825,3013014-3013045,301... 28 8.9
12_01_0250 - 1852619-1854124,1855224-1856153,1856293-1856409,185... 28 8.9
09_02_0430 - 9313768-9314259,9314347-9315299,9316875-9317022 28 8.9
>03_02_0140 +
5864612-5864955,5865154-5865381,5865460-5865814,
5865899-5866023,5866150-5866285,5866382-5866621
Length = 475
Score = 305 bits (748), Expect = 3e-83
Identities = 138/208 (66%), Positives = 176/208 (84%), Gaps = 1/208 (0%)
Frame = +2
Query: 119 GIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 298
G + L +++PF + LPE+ +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 4 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
Query: 299 FYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 475
FYW+RVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV ++ + DRAL NGAQKL G
Sbjct: 64 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLG 123
Query: 476 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 655
++I +G+A+ YV++GMYG S++G G +LII+QLF AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 124 ILIAIGEAVAYVLSGMYGSVSQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGSGIS 183
Query: 656 LFIATNICETIVWKAFSPATVNTGRGTE 739
LFIATNICE I+WKAFSP T+N+GRG E
Sbjct: 184 LFIATNICENIIWKAFSPTTINSGRGAE 211
>09_02_0577 -
10862976-10863215,10863653-10863788,10863906-10864030,
10864132-10864516,10864571-10864798,10864976-10865319
Length = 485
Score = 293 bits (719), Expect = 1e-79
Identities = 138/218 (63%), Positives = 176/218 (80%), Gaps = 11/218 (5%)
Frame = +2
Query: 119 GIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 298
G + L +++PF + LPE+ +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 4 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
Query: 299 FYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 475
FYW+RVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV ++ + DRAL NGAQKL G
Sbjct: 64 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLG 123
Query: 476 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 655
++I +G+A+ YV++GMYG S++G G +LII+QLF AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 124 ILIAIGEAVAYVLSGMYGSVSQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGSGIS 183
Query: 656 LFIATNIC----------ETIVWKAFSPATVNTGRGTE 739
LFIATNIC E I+WKAFSP T+N+GRG E
Sbjct: 184 LFIATNICLLLVNLLLHSENIIWKAFSPTTINSGRGAE 221
>09_02_0576 -
10853361-10853600,10854033-10854168,10854285-10854409,
10854487-10854871,10854934-10855161,10855332-10855675
Length = 485
Score = 293 bits (719), Expect = 1e-79
Identities = 138/218 (63%), Positives = 176/218 (80%), Gaps = 11/218 (5%)
Frame = +2
Query: 119 GIKFLEVIKPFCSILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 298
G + L +++PF + LPE+ +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 4 GFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
Query: 299 FYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 475
FYW+RVILASNRGT+MELGI+PIVTSG++MQLL G+KIIEV ++ + DRAL NGAQKL G
Sbjct: 64 FYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQKLLG 123
Query: 476 MVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 655
++I +G+A+ YV++GMYG S++G G +LII+QLF AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 124 ILIAIGEAVAYVLSGMYGSVSQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGSGIS 183
Query: 656 LFIATNIC----------ETIVWKAFSPATVNTGRGTE 739
LFIATNIC E I+WKAFSP T+N+GRG E
Sbjct: 184 LFIATNICLLLVNLLLHSENIIWKAFSPTTINSGRGAE 221
>03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598
Length = 537
Score = 235 bits (575), Expect = 3e-62
Identities = 107/211 (50%), Positives = 152/211 (72%), Gaps = 6/211 (2%)
Frame = +2
Query: 125 KFLEVIKPFCSILPEIAKPE-RKIQFREKVLWTAITLFIFLVCCQIPLFGI----MSSDS 289
+ L++++PF +LPE+ +P+ R++ FR K+ TA LF FL C Q+PL+G+ +
Sbjct: 10 RLLDLVRPFMPLLPEVREPDGRRVPFRRKLACTAAALFAFLACSQLPLYGLHRAAAAGGG 69
Query: 290 ADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDT-PKDRALFNGAQK 466
ADPFYW+R ILASNRGT+MELGI+P+VT+G ++QLL G+ ++ + P DRAL + AQK
Sbjct: 70 ADPFYWVRAILASNRGTVMELGITPVVTAGTLVQLLVGSNLVRADSSNPDDRALLSAAQK 129
Query: 467 LFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGS 646
L +VIT G+A YV++G YG +GAG +L+++QL + G++ + LDELLQKGYG GS
Sbjct: 130 LLSIVITAGEATAYVLSGAYGSVGVLGAGNAVLVVLQLVLGGMVAIFLDELLQKGYGFGS 189
Query: 647 GISLFIATNICETIVWKAFSPATVNTGRGTE 739
GISLF A N CE +V +A SPAT++ GRG E
Sbjct: 190 GISLFTAANTCEGVVTRALSPATMDRGRGAE 220
>09_04_0704 +
19623046-19623386,19623583-19623792,19623872-19624223,
19624320-19624444,19624578-19624668,19624817-19625050
Length = 450
Score = 137 bits (331), Expect = 1e-32
Identities = 73/192 (38%), Positives = 120/192 (62%), Gaps = 4/192 (2%)
Frame = +2
Query: 155 SILPEIAKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSA---DPFYWIRVILA 325
+++PE+ P++ I R+K +TAI LFIF+ Q+ L+GI DP +W+ +ILA
Sbjct: 12 ALVPEVQCPDQPISPRQKFKYTAIVLFIFVTASQVLLYGIQHQPRTIEPDPLHWLHLILA 71
Query: 326 SNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDT-PKDRALFNGAQKLFGMVITVGQAI 502
S+R TL+ GI I+ +++++ KII + + P+ L N AQ+L G+++ + A+
Sbjct: 72 SSRSTLLSHGIVAILVPEVLVKIWVYLKIITLDTSAPETGVLMNRAQRLLGILVAILGAV 131
Query: 503 VYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICE 682
+ + + + + LI++Q+ + +IV+ LD++L+KGYGL SGISLF ATNIC
Sbjct: 132 NFYVRSQHFTVNTV------LIMLQILCSDIIVIYLDDVLRKGYGLLSGISLFTATNICV 185
Query: 683 TIVWKAFSPATV 718
I+WKAFSP +V
Sbjct: 186 NILWKAFSPMSV 197
>12_02_1195 +
26906814-26907121,26907771-26907992,26908913-26909153,
26909512-26909642,26910336-26910474,26910600-26910810,
26911371-26911759
Length = 546
Score = 132 bits (318), Expect = 4e-31
Identities = 69/176 (39%), Positives = 104/176 (59%), Gaps = 4/176 (2%)
Frame = +2
Query: 191 IQFREKVLWTAITLFIFLVCCQIPLFGIMS----SDSADPFYWIRVILASNRGTLMELGI 358
+ FR K +TA +L +FLV Q+PL+G+ D DP YW+ + AS+ TLM LGI
Sbjct: 15 VSFRRKAAYTAASLLVFLVAGQLPLYGVKKYNGDKDVPDPLYWMNCMFASSNNTLMTLGI 74
Query: 359 SPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPS 538
P++ S + +++ + +I P N A+KL + + + A+ V++ G +
Sbjct: 75 IPLLLSEMAVRIFSA--LIITRWPPFHHVRLNRARKLLAIAMAMVMAVSGVLSA--GVAA 130
Query: 539 EIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFS 706
E+G L+++ QLF+ G+I + LDELLQKGYGL SG+SLF A N C I WKAF+
Sbjct: 131 ELGTMASLVVMFQLFLGGMIAIYLDELLQKGYGLLSGVSLFAAANCCACIFWKAFT 186
>12_02_1087 - 25949878-25950369,25950386-25950944,25950988-25951388
Length = 483
Score = 106 bits (254), Expect = 2e-23
Identities = 68/212 (32%), Positives = 109/212 (51%), Gaps = 5/212 (2%)
Frame = +2
Query: 119 GIKFLEVIKPFCSILPEIAKP-ERKIQFREKVLWTAI-TLFIFLVCCQIPLFGIMSSDSA 292
G +++P + P + + E + FR +V TA +L + L +PL+
Sbjct: 13 GTALWRLLRPLAVLGPRMQRRREAAVPFRGQVRNTAAASLLLLLSLSHVPLYAGAGDADP 72
Query: 293 DPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLF 472
DP +W R +LA+ RGT+MELG++P+VTS ++++LLA ++ D+ A +
Sbjct: 73 DPLFWARPLLAAPRGTVMELGVAPVVTSWVVVRLLAA--LLFDSDSSTTVASCELLARCL 130
Query: 473 GMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGYGLG--S 646
V + ++ + + G GAG L+++QLF G++V+L D L + GYG+ S
Sbjct: 131 AYVTNASRLVIGIAAAL-GMCGSGGAGNAALVVLQLFAGGVVVVLADLLHETGYGVEGVS 189
Query: 647 GISLFIATNICETIVWKAFSPATVN-TGRGTE 739
SL IATN CE V FSP + G G E
Sbjct: 190 AASLLIATNACERAVSHLFSPVKLRLAGAGPE 221
>12_02_1184 + 26785739-26786113
Length = 124
Score = 65.3 bits (152), Expect = 5e-11
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Frame = +2
Query: 191 IQFREKVLWTAITLFIFLVCCQIPLFGIMS---SDSADPFYWIRVILASNRGTLMELGIS 361
+ FR KVL+TA++L +FLV ++ L+G+ + DP YW+ + AS R T+M LG+
Sbjct: 33 VSFRRKVLYTAVSLLVFLVAGELLLYGVQNYYGGGEHDPRYWMNAMSASLRPTVMALGLV 92
Query: 362 PIVTSGLIMQLLAGAKIIEVGD 427
P++ S +++ L KII V D
Sbjct: 93 PLLYSEMVVHLCMALKIIGVHD 114
>12_02_1185 +
26786543-26786545,26786676-26786686,26787032-26787262,
26787892-26788012,26788263-26788393,26788718-26788760,
26788963-26789220
Length = 265
Score = 62.5 bits (145), Expect = 3e-10
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +2
Query: 461 QKLFGMVITVGQ--AIVYVMTGMYGEPSEIGAGVCLLIIIQLFVAGLIVLLLDELLQKGY 634
++LF M I + AIV + + G I L+ + QL GLI + LD+LL+KGY
Sbjct: 9 RRLFAMQIAIVSPVAIVLYASAIAGGTPFITTAA-LVFVFQLIAGGLIAIYLDDLLRKGY 67
Query: 635 GLGSGISLFIATNICETIVWKAFSPA 712
G SG+SLF A N C I WKA + A
Sbjct: 68 GFLSGLSLFSAANCCACIFWKALNHA 93
>12_02_1183 - 26764883-26765174,26765559-26765677
Length = 136
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Frame = +2
Query: 191 IQFREKVLWTAITLFIFLVCCQIPLFGIMS----SDSADPFYWIRVILASNRGTLMELGI 358
+ FR K +TA +L +FLV Q+PL+G+ D DP YW+ + AS+ TLM LGI
Sbjct: 48 VSFRRKAAYTAASLLVFLVAGQLPLYGVKKYNGDKDVPDPLYWMNCMFASSNNTLMTLGI 107
Query: 359 SPIVTSGLIMQLLA 400
P++ S + +++ +
Sbjct: 108 IPLLLSEMAVRIFS 121
>02_01_0240 - 1593186-1593323,1593380-1593406
Length = 54
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 247 MLPDSLIWYNVIRQCRSLLLDPCNSCIKQRDI 342
++ D L+W + R C+S ++P C R I
Sbjct: 15 LISDGLLWLAIARCCKSTCMEPIQGCFLSRQI 46
>06_02_0364 +
15178583-15178881,15179652-15179723,15179853-15179917,
15180890-15180934,15182493-15183170,15183376-15183410,
15183647-15183736,15183896-15183985,15184164-15184262,
15184938-15185013,15185473-15185588
Length = 554
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -1
Query: 586 HKQLYDNEEAHSGTNFTGFTIHSSHYINNSLTNSNHHTK*FLCT--IKQSPVFRSVT-NF 416
H +L D +EA SG G H H ++ HH L T I+ + SV +F
Sbjct: 112 HSRLIDLKEASSGFELMGMHRHRQHRVDFMEWAPGHHVGVALITMPIRAGARYCSVVGDF 171
Query: 415 NDFSTSK 395
N +ST++
Sbjct: 172 NQWSTTE 178
>06_01_0476 - 3388176-3389267
Length = 363
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 554 VCLLIIIQLFVAGLIVLLLDELLQKGYGLGSG 649
V +++ + LFV+GL+ LL+ LL++G G G
Sbjct: 33 VLVILAVVLFVSGLLHLLVRFLLRRGRGRDGG 64
>12_01_1011 +
10292709-10292765,10293003-10293156,10294062-10294183,
10294288-10294495,10294644-10294789,10294920-10295226,
10295666-10296117,10296388-10296678
Length = 578
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 374 SGLIMQLLAGAKIIEVGDTPKDRALFN-GAQKLFGMV-ITVGQAIVYVMTGMYGEPSEIG 547
+G +L+ A ++ K RA G +KL V +T+G V+ YG P +
Sbjct: 27 NGRAQRLVVRADAKDIAFDQKSRAALQAGVEKLANAVGVTLGPRGRNVVLDEYGSPKVVN 86
Query: 548 AGVCLLIIIQLF 583
GV + I+L+
Sbjct: 87 DGVTIARAIELY 98
>12_01_0384 +
3012359-3012404,3012641-3012825,3013014-3013045,
3013387-3013514,3013695-3013940,3014200-3014284,
3014369-3014387,3014563-3014667
Length = 281
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 102 RNKSKWE*NFWK*LSRSAVYCQK*RN--QNVRFNSERKYYGQQS 227
RN +WE + W+ S ++Y Q+ + F S+ K+YG S
Sbjct: 66 RNVQEWEEDVWRSSSVLSIYHQRGTRGYKQAAFKSKDKFYGSSS 109
>12_01_0250 -
1852619-1854124,1855224-1856153,1856293-1856409,
1856777-1857157
Length = 977
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -2
Query: 216 HNTFSRN*ILRSGFAISGNILQNGLITSKNFIPILIYCDLTILTKI 79
HN F N L +GF + + KNF+ I + +L + K+
Sbjct: 99 HNFFKLNPYLSTGFVTINRAIMEAMEDEKNFLEIKVKSNLCSILKL 144
>09_02_0430 - 9313768-9314259,9314347-9315299,9316875-9317022
Length = 530
Score = 27.9 bits (59), Expect = 8.9
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Frame = +2
Query: 257 IPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK 436
IP F +S ++ FY + + G L S I S L++ L ++ D
Sbjct: 295 IPAFQQLSGMNSILFYSPVIFQSLGFGNSAALYSSIITGSMLVVGALVSMVVV---DRLG 351
Query: 437 DRALF--NGAQKLFGMVITVGQAIVYVMTGMYGEPSEIGAGVCLLIIIQLFV 586
R LF G Q + MV+ A++ + +GE G G L++ I LFV
Sbjct: 352 RRFLFIEAGIQMISSMVVV---AVILALKFGHGEELSKGVGTVLVVAICLFV 400
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,151,802
Number of Sequences: 37544
Number of extensions: 447488
Number of successful extensions: 1163
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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