Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16n24r
(818 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 28 0.12
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 25 0.64
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 25 0.64
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 25 0.64
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 24 1.5
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 4.5
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 5.9
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 5.9
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 5.9
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 5.9
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 5.9
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 7.8
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 7.8
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 7.8
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 7.8
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 7.8
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 7.8
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 27.9 bits (59), Expect = 0.12
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 536 PTLGTPLTAVLYRPLARPRQST 601
P +GTP T ++Y+P P Q++
Sbjct: 847 PVIGTPSTGMMYKPFLIPEQTS 868
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 25.4 bits (53), Expect = 0.64
Identities = 9/27 (33%), Positives = 11/27 (40%)
Frame = -3
Query: 636 PPCWPSPTATLFVDWRGLANGLYNTAV 556
P C PS F+ W G N N +
Sbjct: 354 PDCCPSDRMVYFITWLGYVNSALNPLI 380
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 25.4 bits (53), Expect = 0.64
Identities = 9/27 (33%), Positives = 11/27 (40%)
Frame = -3
Query: 636 PPCWPSPTATLFVDWRGLANGLYNTAV 556
P C PS F+ W G N N +
Sbjct: 354 PDCCPSDRMVYFITWLGYVNSALNPLI 380
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 25.4 bits (53), Expect = 0.64
Identities = 9/27 (33%), Positives = 11/27 (40%)
Frame = -3
Query: 636 PPCWPSPTATLFVDWRGLANGLYNTAV 556
P C PS F+ W G N N +
Sbjct: 354 PDCCPSDRMVYFITWLGYVNSALNPLI 380
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 24.2 bits (50), Expect = 1.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 358 TTPPGPSRIQTGNPVGSATSLSSS 429
TTP PSR Q+ + SA ++S+S
Sbjct: 530 TTPVLPSRFQSHPSIDSANTISNS 553
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/25 (32%), Positives = 10/25 (40%)
Frame = -3
Query: 630 CWPSPTATLFVDWRGLANGLYNTAV 556
C P TA + W G N N +
Sbjct: 652 CQPGVTAFIVTSWLGYMNSFVNPVI 676
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 5.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 751 NGNVNSIRNSNYNGN 707
N N N+ N+NYN N
Sbjct: 98 NNNYNNNYNNNYNNN 112
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 5.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 751 NGNVNSIRNSNYNGN 707
N N N+ N+NYN N
Sbjct: 98 NNNYNNNYNNNYNNN 112
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.2 bits (45), Expect = 5.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 194 RL*EQVLTLQPGWGFLPPLG*KSP 265
R+ + LQPG F PLG + P
Sbjct: 458 RMDRDAVYLQPGMSFGEPLGLRRP 481
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.2 bits (45), Expect = 5.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 751 NGNVNSIRNSNYNGNLPLF 695
N N N+ N+NYN L+
Sbjct: 335 NNNYNNYNNNNYNNYKKLY 353
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 5.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 751 NGNVNSIRNSNYNGNL 704
NGN N N+N NG++
Sbjct: 257 NGNGNGASNNNNNGDM 272
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 7.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 777 PKQPSSYYKMAMSTLSGTRTTMET 706
PKQP ++ S L TT++T
Sbjct: 439 PKQPIKLFEQWKSILESGTTTLQT 462
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -2
Query: 787 PDVTKTTIKLLQNGNVNSIRNSNYNGN 707
P + + + N N+ N+NYN N
Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNN 105
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -2
Query: 787 PDVTKTTIKLLQNGNVNSIRNSNYNGN 707
P + + + N N+ N+NYN N
Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNN 105
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -2
Query: 787 PDVTKTTIKLLQNGNVNSIRNSNYNGN 707
P + + + N N+ N+NYN N
Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNN 105
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -2
Query: 787 PDVTKTTIKLLQNGNVNSIRNSNYNGN 707
P + + + N N+ N+NYN N
Sbjct: 79 PKIISSLSNNYKYSNYNNYNNNNYNNN 105
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 751 NGNVNSIRNSNYNGN 707
N N N+ N+NYN N
Sbjct: 332 NYNNNNYNNNNYNNN 346
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 265,261
Number of Sequences: 438
Number of extensions: 6881
Number of successful extensions: 34
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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