Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16n14f
(730 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 38 7e-05
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 38 7e-05
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 25 0.73
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 23 2.9
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 5.2
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 6.8
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 22 6.8
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 9.0
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 21 9.0
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 38.3 bits (85), Expect = 7e-05
Identities = 42/173 (24%), Positives = 68/173 (39%), Gaps = 15/173 (8%)
Frame = +3
Query: 243 PKYFAXXXXXXXXXXXXTHTAVVPLDLVKCRLQV--------DAEKYKNVVNGFKVSVRE 398
P FA + T V P++ VK LQV + ++YK +++ F +E
Sbjct: 7 PVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKE 66
Query: 399 EGVRGLAKGWAPTFIGYSMQGLCKSGFYEVFKVAYAGMLDDETAYTYRTFVYLAASASAE 578
+G +G I Y F + +K + G +D T + R FV AS A
Sbjct: 67 QGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQF-LRYFVGNLASGGAA 125
Query: 579 FIADIA-LSPMEAAKVRIQTMPGFASTLRE------AWPKMVKNEGYGTFYKG 716
+ + P++ A+ R+ G A RE K+ K +G Y+G
Sbjct: 126 GATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRG 178
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 38.3 bits (85), Expect = 7e-05
Identities = 42/173 (24%), Positives = 68/173 (39%), Gaps = 15/173 (8%)
Frame = +3
Query: 243 PKYFAXXXXXXXXXXXXTHTAVVPLDLVKCRLQV--------DAEKYKNVVNGFKVSVRE 398
P FA + T V P++ VK LQV + ++YK +++ F +E
Sbjct: 7 PVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKE 66
Query: 399 EGVRGLAKGWAPTFIGYSMQGLCKSGFYEVFKVAYAGMLDDETAYTYRTFVYLAASASAE 578
+G +G I Y F + +K + G +D T + R FV AS A
Sbjct: 67 QGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQF-LRYFVGNLASGGAA 125
Query: 579 FIADIA-LSPMEAAKVRIQTMPGFASTLRE------AWPKMVKNEGYGTFYKG 716
+ + P++ A+ R+ G A RE K+ K +G Y+G
Sbjct: 126 GATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRG 178
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 25.0 bits (52), Expect = 0.73
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 331 HFTRSRGTTAVWVRPHDRTP 272
HF S G TA+W+ P +R+P
Sbjct: 58 HFIES-GITAIWLSPINRSP 76
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 23.0 bits (47), Expect = 2.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 686 LDHLRPRLAEGARETRHGLD 627
L+HLR +AEG + ++ LD
Sbjct: 435 LNHLRANVAEGRNQRKNVLD 454
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 432 PTFIGYSMQGLCKSGFYEVFKVA 500
P F+GY + + KSG +V A
Sbjct: 403 PNFVGYKGKHIGKSGKVDVINAA 425
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -2
Query: 576 PPTQTPPGTRRYGK 535
PP QTPP + G+
Sbjct: 395 PPRQTPPSRKESGR 408
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 133 GPRNGEFRAASSNEEN 86
GPRNG+ + SS EN
Sbjct: 210 GPRNGKRKRKSSTIEN 225
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 9.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 462 LCKSGFYEVFKVAYAGMLDDET 527
L K+G +EV V A M D +T
Sbjct: 270 LLKAGVFEVLLVRLACMFDAQT 291
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 21.4 bits (43), Expect = 9.0
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 561 ASASAEFIADIALSPMEAAKVRIQTMPGFASTLREAWPKMVKNEGYG 701
A +A +AD L+ +E + Q GFA T P+++K E YG
Sbjct: 46 AKGAAVKLADFGLA-IEV-QGEAQAWFGFAGTPGYLSPEVLKKEPYG 90
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,833
Number of Sequences: 438
Number of extensions: 5134
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -