Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16n02f
         (827 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81534-5|CAB04348.2|  694|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z47074-2|CAA87377.2|  694|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z81119-3|CAB03334.1|  550|Caenorhabditis elegans Hypothetical pr...    29   5.4  
U41263-6|AAC24432.1|  338|Caenorhabditis elegans Serpentine rece...    28   7.1  
U64859-2|AAD34655.1|   98|Caenorhabditis elegans Cell death abno...    28   9.4  

>Z81534-5|CAB04348.2|  694|Caenorhabditis elegans Hypothetical
           protein F37H8.2 protein.
          Length = 694

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
 Frame = -1

Query: 698 F*NTICEFTSSF*CRLLSIQHLF*QFFFVAIIKEIK--LIFTLYHKILPFLKYECSLSSC 525
           F + + E   +  C+ L +   F + FF+  I  +   L  T++H         CS    
Sbjct: 115 FFSKVSEIAGNKFCQELLVSSPFFERFFIFFIPRVSGMLFSTIFHTF-------CS--QL 165

Query: 524 LKLITWFERFWKCYLRFLSNALRKKYLT 441
           ++L+ WF+ FW   +    N     Y+T
Sbjct: 166 MELLQWFQSFWSATVWLYMNQAPLNYIT 193


>Z47074-2|CAA87377.2|  694|Caenorhabditis elegans Hypothetical
           protein F37H8.2 protein.
          Length = 694

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
 Frame = -1

Query: 698 F*NTICEFTSSF*CRLLSIQHLF*QFFFVAIIKEIK--LIFTLYHKILPFLKYECSLSSC 525
           F + + E   +  C+ L +   F + FF+  I  +   L  T++H         CS    
Sbjct: 115 FFSKVSEIAGNKFCQELLVSSPFFERFFIFFIPRVSGMLFSTIFHTF-------CS--QL 165

Query: 524 LKLITWFERFWKCYLRFLSNALRKKYLT 441
           ++L+ WF+ FW   +    N     Y+T
Sbjct: 166 MELLQWFQSFWSATVWLYMNQAPLNYIT 193


>Z81119-3|CAB03334.1|  550|Caenorhabditis elegans Hypothetical
           protein T10H4.4 protein.
          Length = 550

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
 Frame = -1

Query: 584 FTLYHKILPFLKYECSLSSCLKLITWF-----ERFWKCYLRFLSNALRKKYL 444
           + L HK L FLKYE      +++I+       E +W   +R   N L KKY+
Sbjct: 325 YELLHKCLSFLKYEEIFKHSMQIISTVYRCKPEAYWNT-IRIEHNNLMKKYV 375


>U41263-6|AAC24432.1|  338|Caenorhabditis elegans Serpentine
           receptor, class a (alpha)protein 26 protein.
          Length = 338

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
 Frame = -1

Query: 674 TSSF*CRLLSIQHL--F*QFFFVAIIKEIK--LIFTLYHKILPFLKYECSLSSCLKLITW 507
           TS   C L+ IQ L      F V I++  K  L   +YH I+PFL      + CL +I +
Sbjct: 243 TSKSVCTLIIIQFLCVLISSFGVTILRNSKNQLSEEVYHTIVPFLPGVTYANLCLPIIIY 302

Query: 506 FE 501
           ++
Sbjct: 303 YK 304


>U64859-2|AAD34655.1|   98|Caenorhabditis elegans Cell death
           abnormality protein 13 protein.
          Length = 98

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 7/19 (36%), Positives = 17/19 (89%)
 Frame = -1

Query: 110 FDKNGNYSVLSTCILFCLY 54
           + ++G +S++S+C++FCL+
Sbjct: 4   YKRDGYFSIVSSCLIFCLH 22


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,580,654
Number of Sequences: 27780
Number of extensions: 361339
Number of successful extensions: 946
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)