Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16n02f
(827 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 26 0.37
S78458-1|AAB34402.1| 46|Apis mellifera apamin protein. 23 3.4
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 6.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 6.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 6.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 6.0
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.0
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.0
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.0
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.0
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.0
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.0
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 8.0
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 8.0
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 26.2 bits (55), Expect = 0.37
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = -2
Query: 130 CTFEE--SYLIKTETILFYLHVYYSVYMY 50
C F E YLI + TI FYL ++ V+ Y
Sbjct: 198 CPFTEHLGYLIFSSTISFYLPLFVMVFTY 226
>S78458-1|AAB34402.1| 46|Apis mellifera apamin protein.
Length = 46
Score = 23.0 bits (47), Expect = 3.4
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = -1
Query: 71 ILFCLYVYLKGIIVRVYFI 15
+L C+Y++L I++ YF+
Sbjct: 4 MLRCIYLFLSVILITSYFV 22
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 6.0
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3
Query: 87 CFIYMYIILFICI 49
CFIY ++ F+C+
Sbjct: 372 CFIYASLLEFVCV 384
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.2 bits (45), Expect = 6.0
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3
Query: 87 CFIYMYIILFICI 49
CFIY ++ F+C+
Sbjct: 341 CFIYASLLEFVCV 353
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.2 bits (45), Expect = 6.0
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3
Query: 87 CFIYMYIILFICI 49
CFIY ++ F+C+
Sbjct: 392 CFIYASLLEFVCV 404
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.2 bits (45), Expect = 6.0
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3
Query: 87 CFIYMYIILFICI 49
CFIY ++ F+C+
Sbjct: 341 CFIYASLLEFVCV 353
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 812 LKHFVTSSAWILLGDP*K 759
L F+T+ W L+G P K
Sbjct: 151 LSDFITNGEWYLIGMPGK 168
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 812 LKHFVTSSAWILLGDP*K 759
L F+T+ W L+G P K
Sbjct: 151 LSDFITNGEWYLIGMPGK 168
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 812 LKHFVTSSAWILLGDP*K 759
L F+T+ W L+G P K
Sbjct: 151 LSDFITNGEWYLIGMPGK 168
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 812 LKHFVTSSAWILLGDP*K 759
L F+T+ W L+G P K
Sbjct: 151 LSDFITNGEWYLIGMPGK 168
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 812 LKHFVTSSAWILLGDP*K 759
L F+T+ W L+G P K
Sbjct: 151 LSDFITNGEWYLIGMPGK 168
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 812 LKHFVTSSAWILLGDP*K 759
L F+T+ W L+G P K
Sbjct: 151 LSDFITNGEWYLIGMPGK 168
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 812 LKHFVTSSAWILLGDP*K 759
L F+T+ W L+G P K
Sbjct: 219 LSDFITNGEWYLIGMPGK 236
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 812 LKHFVTSSAWILLGDP*K 759
L F+T+ W L+G P K
Sbjct: 219 LSDFITNGEWYLIGMPGK 236
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,683
Number of Sequences: 438
Number of extensions: 4745
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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