Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16m24r
         (892 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   2.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   2.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.7  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    22   6.5  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    22   6.5  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   8.6  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +1

Query: 262 NNNISKILGYSNQAKIIRNKAFSS 333
           N ++  IL +SN+ +I+  KAF++
Sbjct: 499 NGSLYAILNFSNEEQIVDLKAFNN 522


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +1

Query: 262 NNNISKILGYSNQAKIIRNKAFSS 333
           N ++  IL +SN+ +I+  KAF++
Sbjct: 499 NGSLYAILNFSNEEQIVDLKAFNN 522


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 296 LL*PRILEILLFNLKLNFKCSMNALLCL 213
           LL   + E+LL  L   F    N+++CL
Sbjct: 270 LLKAGVFEVLLVRLACMFDAQTNSMICL 297


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 1   HYIFTYSNNYDNIITRMLKN 60
           +Y   Y+NNY+N   ++ KN
Sbjct: 100 NYNNNYNNNYNNNYKKLYKN 119


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 1   HYIFTYSNNYDNIITRMLKN 60
           +Y   Y+NNY+N   ++ KN
Sbjct: 100 NYNNNYNNNYNNNYKKLYKN 119


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = -2

Query: 174 KLRNVSSILSVFKNHLVERV 115
           +L N++  L VF++HL+ ++
Sbjct: 112 QLGNLTKHLQVFRDHLINQI 131


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,372
Number of Sequences: 438
Number of extensions: 4174
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)