Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16m24f
         (685 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2034|AAF50006.2| 2523|Drosophila melanogaster CG32092-P...    32   0.64 
AY553965-1|AAS90559.1|  748|Drosophila melanogaster thisbe protein.    31   1.5  
AE013599-1345|AAF58621.2|  748|Drosophila melanogaster CG12443-P...    31   1.5  

>AE014296-2034|AAF50006.2| 2523|Drosophila melanogaster CG32092-PB
            protein.
          Length = 2523

 Score = 32.3 bits (70), Expect = 0.64
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -2

Query: 567  FPIRW*ILGSTALARASVSNTSGLSPESSPTR*GEVEIASQGYQH 433
            F ++W +L S  +A      T G + E + +  G++E++S GY H
Sbjct: 866  FRLKWGVLDSNLVASNLSLTTGGCTKELTLSHHGDIELSSPGYPH 910


>AY553965-1|AAS90559.1|  748|Drosophila melanogaster thisbe protein.
          Length = 748

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -2

Query: 549 ILGSTALARASVSNTSGLSPESSPTR*GEVEIASQGYQHRQEKKN 415
           ++  T LAR+++SN S  S +++PT   + E A    Q  + + N
Sbjct: 499 VIEQTPLARSNISNKSSSSTKATPTATSQTETAQSTQQPSRHRSN 543


>AE013599-1345|AAF58621.2|  748|Drosophila melanogaster CG12443-PA
           protein.
          Length = 748

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -2

Query: 549 ILGSTALARASVSNTSGLSPESSPTR*GEVEIASQGYQHRQEKKN 415
           ++  T LAR+++SN S  S +++PT   + E A    Q  + + N
Sbjct: 499 VIEQTPLARSNISNKSSSSTKATPTATSQTETAQSTQQPSRHRSN 543


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,171,728
Number of Sequences: 53049
Number of extensions: 549938
Number of successful extensions: 1425
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1425
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)