Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16m24f
(685 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.1
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 23 3.6
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 4.7
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 4.7
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 4.7
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 4.7
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 4.7
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 4.7
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 4.7
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 4.7
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 6.3
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 6.3
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 8.3
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 10 EICNVDSDNQVHETVASKKFSSTSYNINHHEA 105
+I +VD NQ+ T A K YN+ +E+
Sbjct: 22 QIIDVDEKNQILTTNAWLKLEWVDYNLQWNES 53
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 10 EICNVDSDNQVHETVASKKFSSTSYNINHHEA 105
+I +VD NQ+ T A K YN+ +E+
Sbjct: 22 QIIDVDEKNQILTTNAWLKLEWVDYNLQWNES 53
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 10 EICNVDSDNQVHETVASKKFSSTSYNINHHEA 105
+I +VD NQ+ T A K YN+ +E+
Sbjct: 22 QIIDVDEKNQILTTNAWLKLEWVDYNLQWNES 53
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 10 EICNVDSDNQVHETVASKKFSSTSYNINHHEA 105
+I +VD NQ+ T A K YN+ +E+
Sbjct: 22 QIIDVDEKNQILTTNAWLKLEWVDYNLQWNES 53
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 10 EICNVDSDNQVHETVASKKFSSTSYNINHHEA 105
+I +VD NQ+ T A K YN+ +E+
Sbjct: 22 QIIDVDEKNQILTTNAWLKLEWVDYNLQWNES 53
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 10 EICNVDSDNQVHETVASKKFSSTSYNINHHEA 105
+I +VD NQ+ T A K YN+ +E+
Sbjct: 22 QIIDVDEKNQILTTNAWLKLEWVDYNLQWNES 53
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 10 EICNVDSDNQVHETVASKKFSSTSYNINHHEA 105
+I +VD NQ+ T A K YN+ +E+
Sbjct: 90 QIIDVDEKNQILTTNAWLKLEWVDYNLQWNES 121
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 10 EICNVDSDNQVHETVASKKFSSTSYNINHHEA 105
+I +VD NQ+ T A K YN+ +E+
Sbjct: 90 QIIDVDEKNQILTTNAWLKLEWVDYNLQWNES 121
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 22.6 bits (46), Expect = 3.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 412 LVFFFLPMLIALRGYFNFTLACR 480
++FF +PMLI L Y L R
Sbjct: 218 IIFFLIPMLIILVVYTRMGLKIR 240
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 337 MLPALARNTIISRFLNSINDYNYSNTIKLF 248
++ +L+ N S + N N+ NY+N KL+
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 337 MLPALARNTIISRFLNSINDYNYSNTIKLF 248
++ +L+ N S + N N+ NY+N KL+
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 337 MLPALARNTIISRFLNSINDYNYSNTIKLF 248
++ +L+ N S + N N+ NY+N KL+
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 337 MLPALARNTIISRFLNSINDYNYSNTIKLF 248
++ +L+ N S + N N+ NY+N KL+
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 337 MLPALARNTIISRFLNSINDYNYSNTIKLF 248
++ +L+ N S + N N+ NY+N KL+
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 337 MLPALARNTIISRFLNSINDYNYSNTIKLF 248
++ +L+ N S + N N+ NY+N KL+
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 337 MLPALARNTIISRFLNSINDYNYSNTIKLF 248
++ +L+ N S + N N+ NY+N KL+
Sbjct: 81 IISSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 676 RSPSSPNPSACDEGLDE*INPQTQP 602
R+ +PN +AC L +NP QP
Sbjct: 203 RARETPNYTACPPTLACPLNPNPQP 227
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 28 SDNQVHETVASKKFSSTSYNINHHEAI 108
S+N + + + YNINH E I
Sbjct: 86 SNNYNYSNYNNNNYKQLCYNINHIEQI 112
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 337 MLPALARNTIISRFLNSINDYNYSNTIKLF 248
++ +L+ N S + N N+ NY+N KL+
Sbjct: 81 IVSSLSNNYNYSNYNNYNNNNNYNNYKKLY 110
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +1
Query: 7 LEICNVDSDNQVHETVASKKFSSTSYNINHHEA 105
+++ NV+ NQ+ ++ +F T Y + EA
Sbjct: 61 VQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEA 93
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,059
Number of Sequences: 438
Number of extensions: 3698
Number of successful extensions: 22
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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