Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16m19f
(723 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117337-3|CAH73314.1| 456|Homo sapiens zinc finger protein 25 ... 31 5.5
AK056452-1|BAB71187.1| 456|Homo sapiens protein ( Homo sapiens ... 31 5.5
AJ491696-1|CAD36955.1| 456|Homo sapiens zinc finger protein 25 ... 31 5.5
BX641059-1|CAE46030.1| 351|Homo sapiens hypothetical protein pr... 30 7.3
BC051715-1|AAH51715.1| 828|Homo sapiens neuroligin 3 protein. 30 7.3
BC032555-1|AAH32555.1| 823|Homo sapiens neuroligin 1 protein. 30 7.3
AF217413-2|AAF71232.1| 828|Homo sapiens neuroligin 3 isoform pr... 30 7.3
AF217411-1|AAF71230.1| 828|Homo sapiens neuroligin 3 isoform HN... 30 7.3
AB028993-1|BAA83022.2| 826|Homo sapiens KIAA1070 protein protein. 30 7.3
BC060779-1|AAH60779.1| 228|Homo sapiens cytochrome b5 domain co... 30 9.6
AK057061-1|BAB71357.1| 157|Homo sapiens protein ( Homo sapiens ... 30 9.6
>AL117337-3|CAH73314.1| 456|Homo sapiens zinc finger protein 25
protein.
Length = 456
Score = 30.7 bits (66), Expect = 5.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 594 LYWSCFDRNRLEVLYVWYHQNPPNSVFQSRVDRPSWIAGNFFP 722
LY N ++ V YH N PN+VF+ + + WI FP
Sbjct: 32 LYKDVMLENYSHLVSVGYHVNKPNAVFKLKQGKEPWILEVEFP 74
>AK056452-1|BAB71187.1| 456|Homo sapiens protein ( Homo sapiens
cDNA FLJ31890 fis, clone NT2RP7003203, moderately
similar to ZINC FINGER PROTEIN 184. ).
Length = 456
Score = 30.7 bits (66), Expect = 5.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 594 LYWSCFDRNRLEVLYVWYHQNPPNSVFQSRVDRPSWIAGNFFP 722
LY N ++ V YH N PN+VF+ + + WI FP
Sbjct: 32 LYKDVMLENYSHLVSVGYHVNKPNAVFKLKQGKEPWILEVEFP 74
>AJ491696-1|CAD36955.1| 456|Homo sapiens zinc finger protein 25
protein.
Length = 456
Score = 30.7 bits (66), Expect = 5.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 594 LYWSCFDRNRLEVLYVWYHQNPPNSVFQSRVDRPSWIAGNFFP 722
LY N ++ V YH N PN+VF+ + + WI FP
Sbjct: 32 LYKDVMLENYSHLVSVGYHVNKPNAVFKLKQGKEPWILEVEFP 74
>BX641059-1|CAE46030.1| 351|Homo sapiens hypothetical protein
protein.
Length = 351
Score = 30.3 bits (65), Expect = 7.3
Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 2/131 (1%)
Frame = +3
Query: 90 TDLPEPGQLAFVLNEDEFEDYLDAYLALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPV 269
T + EP + LN + D A +Q E LA+ ND R +G +P V
Sbjct: 15 TYIQEPNEDCLYLNV--YVPTEDGSGAKKQGEDLAD---NDGDEDEDIRDSG--AKPVMV 67
Query: 270 YIHRGNYLSPTGN--TGQIRLNRGEQVLIACTGSGRTIRHPNVASNLAVGTVSCQNNNLV 443
YIH G+Y+ TGN G I + G ++I + + A G + +
Sbjct: 68 YIHGGSYMEGTGNMIDGSILASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLL-DQIQ 126
Query: 444 TANWLRGNSAF 476
W+ N AF
Sbjct: 127 ALRWVSENIAF 137
>BC051715-1|AAH51715.1| 828|Homo sapiens neuroligin 3 protein.
Length = 828
Score = 30.3 bits (65), Expect = 7.3
Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 2/131 (1%)
Frame = +3
Query: 90 TDLPEPGQLAFVLNEDEFEDYLDAYLALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPV 269
T + EP + LN + D A +Q E LA+ ND R +G +P V
Sbjct: 132 TYIQEPNEDCLYLNV--YVPTEDGSGAKKQGEDLAD---NDGDEDEDIRDSG--AKPVMV 184
Query: 270 YIHRGNYLSPTGN--TGQIRLNRGEQVLIACTGSGRTIRHPNVASNLAVGTVSCQNNNLV 443
YIH G+Y+ TGN G I + G ++I + + A G + +
Sbjct: 185 YIHGGSYMEGTGNMIDGSILASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLL-DQIQ 243
Query: 444 TANWLRGNSAF 476
W+ N AF
Sbjct: 244 ALRWVSENIAF 254
>BC032555-1|AAH32555.1| 823|Homo sapiens neuroligin 1 protein.
Length = 823
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +3
Query: 246 DLGQPQPV--YIHRGNYLSPTGN--TGQIRLNRGEQVLI 350
D G P+PV YIH G+Y+ TGN G + + G ++I
Sbjct: 168 DSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVI 206
>AF217413-2|AAF71232.1| 828|Homo sapiens neuroligin 3 isoform
protein.
Length = 828
Score = 30.3 bits (65), Expect = 7.3
Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 2/131 (1%)
Frame = +3
Query: 90 TDLPEPGQLAFVLNEDEFEDYLDAYLALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPV 269
T + EP + LN + D A +Q E LA+ ND R +G +P V
Sbjct: 132 TYIQEPNEDCLYLNV--YVPTEDGSGAKKQGEDLAD---NDGDEDEDIRDSG--AKPVMV 184
Query: 270 YIHRGNYLSPTGN--TGQIRLNRGEQVLIACTGSGRTIRHPNVASNLAVGTVSCQNNNLV 443
YIH G+Y+ TGN G I + G ++I + + A G + +
Sbjct: 185 YIHGGSYMEGTGNMIDGSILASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLL-DQIQ 243
Query: 444 TANWLRGNSAF 476
W+ N AF
Sbjct: 244 ALRWVSENIAF 254
>AF217411-1|AAF71230.1| 828|Homo sapiens neuroligin 3 isoform HNL3
protein.
Length = 828
Score = 30.3 bits (65), Expect = 7.3
Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 2/131 (1%)
Frame = +3
Query: 90 TDLPEPGQLAFVLNEDEFEDYLDAYLALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPV 269
T + EP + LN + D A +Q E LA+ ND R +G +P V
Sbjct: 132 TYIQEPNEDCLYLNV--YVPTEDGSGAKKQGEDLAD---NDGDEDEDIRDSG--AKPVMV 184
Query: 270 YIHRGNYLSPTGN--TGQIRLNRGEQVLIACTGSGRTIRHPNVASNLAVGTVSCQNNNLV 443
YIH G+Y+ TGN G I + G ++I + + A G + +
Sbjct: 185 YIHGGSYMEGTGNMIDGSIPASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLL-DQIQ 243
Query: 444 TANWLRGNSAF 476
W+ N AF
Sbjct: 244 ALRWVSENIAF 254
>AB028993-1|BAA83022.2| 826|Homo sapiens KIAA1070 protein protein.
Length = 826
Score = 30.3 bits (65), Expect = 7.3
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +3
Query: 246 DLGQPQPV--YIHRGNYLSPTGN--TGQIRLNRGEQVLI 350
D G P+PV YIH G+Y+ TGN G + + G ++I
Sbjct: 171 DSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVI 209
>BC060779-1|AAH60779.1| 228|Homo sapiens cytochrome b5 domain
containing 1 protein.
Length = 228
Score = 29.9 bits (64), Expect = 9.6
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -3
Query: 715 KFPAIQLGLSTRDWNTELGGFWWYHTYRTSKRLRSKQDQYRG*NTLLTMNPT 560
+F + L DW + G WW +Y RL +K R NTL + T
Sbjct: 99 RFVHVPPQLPCSDWANDFGKPWWQGSYYEVGRLSAKTRSIRIINTLTSQEHT 150
>AK057061-1|BAB71357.1| 157|Homo sapiens protein ( Homo sapiens
cDNA FLJ32499 fis, clone SKNSH2000347, weakly similar to
CYTOCHROME B2 PRECURSOR (EC 1.1.2.3). ).
Length = 157
Score = 29.9 bits (64), Expect = 9.6
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -3
Query: 715 KFPAIQLGLSTRDWNTELGGFWWYHTYRTSKRLRSKQDQYRG*NTLLTMNPT 560
+F + L DW + G WW +Y RL +K R NTL + T
Sbjct: 99 RFVHVPPQLPCSDWANDFGKPWWQGSYYEVGRLSAKTRSIRIINTLTSQEHT 150
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,524,158
Number of Sequences: 237096
Number of extensions: 2420439
Number of successful extensions: 9214
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9210
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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