Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16m11r
(916 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC128586-1|AAI28587.1| 748|Homo sapiens SNX26 protein protein. 34 0.83
AK127255-1|BAC86902.1| 1007|Homo sapiens protein ( Homo sapiens ... 34 0.83
AC002398-4|AAB81198.1| 903|Homo sapiens F25965_3 protein. 34 0.83
EF127492-1|ABO33171.1| 2087|Homo sapiens Rho GTPase-activating p... 31 4.4
BC113429-1|AAI13430.1| 1738|Homo sapiens Rho GTPase-activating p... 31 4.4
BC104898-1|AAI04899.1| 1738|Homo sapiens Rho GTPase-activating p... 31 4.4
BC065371-1|AAH65371.1| 327|Homo sapiens RICS protein protein. 31 4.4
BC051236-1|AAH51236.1| 327|Homo sapiens RICS protein protein. 31 4.4
BC000277-1|AAH00277.2| 322|Homo sapiens RICS protein protein. 31 4.4
AY194287-1|AAO43677.1| 1738|Homo sapiens rac GTPase activating p... 31 4.4
AL833062-1|CAD89974.1| 954|Homo sapiens hypothetical protein pr... 31 4.4
AB079856-1|BAC24802.1| 218|Homo sapiens Rho GTPase activating p... 31 4.4
AB018255-1|BAA34432.2| 1770|Homo sapiens KIAA0712 protein protein. 31 4.4
BC130440-1|AAI30441.1| 1031|Homo sapiens M-phase phosphoprotein ... 31 7.7
AK023016-1|BAB14359.1| 692|Homo sapiens protein ( Homo sapiens ... 31 7.7
>BC128586-1|AAI28587.1| 748|Homo sapiens SNX26 protein protein.
Length = 748
Score = 33.9 bits (74), Expect = 0.83
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 400 YSLFDVLNNLWKLEHSYDSQRLPSLADRTFVM*IETKASI 519
Y L V +N+ +L H +DS+R+P L+ F+ I + +S+
Sbjct: 349 YRLSGVSSNIQRLRHEFDSERIPELSGPAFLQDIHSVSSL 388
>AK127255-1|BAC86902.1| 1007|Homo sapiens protein ( Homo sapiens
cDNA FLJ45322 fis, clone BRHIP3006294, moderately
similar to Mus musculus Cdc42 GTPase-activating protein
(Cdgap). ).
Length = 1007
Score = 33.9 bits (74), Expect = 0.83
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 400 YSLFDVLNNLWKLEHSYDSQRLPSLADRTFVM*IETKASI 519
Y L V +N+ +L H +DS+R+P L+ F+ I + +S+
Sbjct: 213 YRLSGVSSNIQRLRHEFDSERIPELSGPAFLQDIHSVSSL 252
>AC002398-4|AAB81198.1| 903|Homo sapiens F25965_3 protein.
Length = 903
Score = 33.9 bits (74), Expect = 0.83
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 400 YSLFDVLNNLWKLEHSYDSQRLPSLADRTFVM*IETKASI 519
Y L V +N+ +L H +DS+R+P L+ F+ I + +S+
Sbjct: 87 YRLSGVSSNIQRLRHEFDSERIPELSGPAFLQDIHSVSSL 126
>EF127492-1|ABO33171.1| 2087|Homo sapiens Rho GTPase-activating
protein protein.
Length = 2087
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 400 YSLFDVLNNLWKLEHSYDSQRLPSLADRTFVM*IETKASI 519
Y L V +N+ +L H +DS+ +P L +V I + S+
Sbjct: 406 YRLSGVASNIQRLRHEFDSEHVPDLTKEPYVQDIHSVGSL 445
>BC113429-1|AAI13430.1| 1738|Homo sapiens Rho GTPase-activating
protein protein.
Length = 1738
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 400 YSLFDVLNNLWKLEHSYDSQRLPSLADRTFVM*IETKASI 519
Y L V +N+ +L H +DS+ +P L +V I + S+
Sbjct: 57 YRLSGVASNIQRLRHEFDSEHVPDLTKEPYVQDIHSVGSL 96
>BC104898-1|AAI04899.1| 1738|Homo sapiens Rho GTPase-activating
protein protein.
Length = 1738
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 400 YSLFDVLNNLWKLEHSYDSQRLPSLADRTFVM*IETKASI 519
Y L V +N+ +L H +DS+ +P L +V I + S+
Sbjct: 57 YRLSGVASNIQRLRHEFDSEHVPDLTKEPYVQDIHSVGSL 96
>BC065371-1|AAH65371.1| 327|Homo sapiens RICS protein protein.
Length = 327
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 400 YSLFDVLNNLWKLEHSYDSQRLPSLADRTFVM*IETKASI 519
Y L V +N+ +L H +DS+ +P L +V I + S+
Sbjct: 224 YRLSGVASNIQRLRHEFDSEHVPDLTKEPYVQDIHSVGSL 263
>BC051236-1|AAH51236.1| 327|Homo sapiens RICS protein protein.
Length = 327
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 400 YSLFDVLNNLWKLEHSYDSQRLPSLADRTFVM*IETKASI 519
Y L V +N+ +L H +DS+ +P L +V I + S+
Sbjct: 224 YRLSGVASNIQRLRHEFDSEHVPDLTKEPYVQDIHSVGSL 263
>BC000277-1|AAH00277.2| 322|Homo sapiens RICS protein protein.
Length = 322
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 400 YSLFDVLNNLWKLEHSYDSQRLPSLADRTFVM*IETKASI 519
Y L V +N+ +L H +DS+ +P L +V I + S+
Sbjct: 116 YRLSGVASNIQRLRHEFDSEHVPDLTKEPYVQDIHSVGSL 155
>AY194287-1|AAO43677.1| 1738|Homo sapiens rac GTPase activating
protein protein.
Length = 1738
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 400 YSLFDVLNNLWKLEHSYDSQRLPSLADRTFVM*IETKASI 519
Y L V +N+ +L H +DS+ +P L +V I + S+
Sbjct: 57 YRLSGVASNIQRLRHEFDSEHVPDLTKEPYVQDIHSVGSL 96
>AL833062-1|CAD89974.1| 954|Homo sapiens hypothetical protein
protein.
Length = 954
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 400 YSLFDVLNNLWKLEHSYDSQRLPSLADRTFVM*IETKASI 519
Y L V +N+ +L H +DS+ +P L +V I + S+
Sbjct: 340 YRLSGVASNIQRLRHEFDSEHVPDLTKEPYVQDIHSVGSL 379
>AB079856-1|BAC24802.1| 218|Homo sapiens Rho GTPase activating
protein protein.
Length = 218
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 400 YSLFDVLNNLWKLEHSYDSQRLPSLADRTFVM*IETKASI 519
Y L V +N+ +L H +DS+ +P L +V I + S+
Sbjct: 57 YRLSGVASNIQRLRHEFDSEHVPDLTKEPYVQDIHSVGSL 96
>AB018255-1|BAA34432.2| 1770|Homo sapiens KIAA0712 protein protein.
Length = 1770
Score = 31.5 bits (68), Expect = 4.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 400 YSLFDVLNNLWKLEHSYDSQRLPSLADRTFVM*IETKASI 519
Y L V +N+ +L H +DS+ +P L +V I + S+
Sbjct: 89 YRLSGVASNIQRLRHEFDSEHVPDLTKEPYVQDIHSVGSL 128
>BC130440-1|AAI30441.1| 1031|Homo sapiens M-phase phosphoprotein 9
protein.
Length = 1031
Score = 30.7 bits (66), Expect = 7.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 430 WKLEHSYDSQRLPSLADRTFVM*IETKASIIQTNVTTDNKTPNI 561
WKLE LP ++TF+ T S Q+N + + K P++
Sbjct: 215 WKLEEKDMHHSLPETLEKTFISLSSTDVSPNQSNTSNEMKLPSL 258
>AK023016-1|BAB14359.1| 692|Homo sapiens protein ( Homo sapiens
cDNA FLJ12954 fis, clone NT2RP2005491, weakly similar to
PARAMYOSIN. ).
Length = 692
Score = 30.7 bits (66), Expect = 7.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 430 WKLEHSYDSQRLPSLADRTFVM*IETKASIIQTNVTTDNKTPNI 561
WKLE LP ++TF+ T S Q+N + + K P++
Sbjct: 11 WKLEEKDMHHSLPETLEKTFISLSSTDVSPNQSNTSNEMKLPSL 54
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,216,802
Number of Sequences: 237096
Number of extensions: 2524442
Number of successful extensions: 8201
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8200
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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