Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16m11r
         (916 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    25   0.73 
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    24   2.2  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    24   2.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   2.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   2.2  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    24   2.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   2.9  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   3.9  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 25.4 bits (53), Expect = 0.73
 Identities = 11/47 (23%), Positives = 26/47 (55%)
 Frame = +1

Query: 316 FNNILSIMIYYLQQYNTKYFN*QLYSSKYSLFDVLNNLWKLEHSYDS 456
           F+N+       + +YN    + + +++K S    LN+L+ ++++ DS
Sbjct: 360 FSNVTPKFPRNIDEYNNNDLDTKKWNNKISALRALNDLYNVKNTLDS 406


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 915 CPXLLGVFFIKHSMVGTDSEEKLQICCGLRFSD 817
           CP ++     KH +  T S  +L   C  +F D
Sbjct: 65  CPDVMSAGESKHGLTNTASHTRLSCDCDDKFYD 97


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 915 CPXLLGVFFIKHSMVGTDSEEKLQICCGLRFSD 817
           CP ++     KH +  T S  +L   C  +F D
Sbjct: 70  CPDVMSAGESKHGLTNTASHTRLSCDCDDKFYD 102


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +2

Query: 773 HDCELPPKENKQRSMSLNLRPQHICNFSSESVPTMECLIKNTPSK 907
           H+ EL     K+  M + +RP+ + +F  E    ME      PSK
Sbjct: 801 HNKELLWTSVKKALMIVGIRPERLPSFDDECWRLMEQCWSGEPSK 845


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +2

Query: 773 HDCELPPKENKQRSMSLNLRPQHICNFSSESVPTMECLIKNTPSK 907
           H+ EL     K+  M + +RP+ + +F  E    ME      PSK
Sbjct: 839 HNKELLWTSVKKALMIVGIRPERLPSFDDECWRLMEQCWSGEPSK 883


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 915 CPXLLGVFFIKHSMVGTDSEEKLQICCGLRFSD 817
           CP ++     KH +  T S  +L   C  +F D
Sbjct: 70  CPDVMSAGESKHGLTNTASHTRLSCDCDDKFYD 102


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 499 IETKASIIQTNVTTDNKTP 555
           + T+ S++ TNVTT   TP
Sbjct: 824 VTTEQSVVVTNVTTTINTP 842


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 341 FIIYNNTIQNILINNYIHQN 400
           F++ ++ +  ILI NY H+N
Sbjct: 303 FMVASSVVSTILILNYHHRN 322


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,554
Number of Sequences: 438
Number of extensions: 5780
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29750994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)