Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16m07f
         (783 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    23   2.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   4.2  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   9.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   9.8  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 181 LKRLKLIFNFKMSVCNSGDVKLDAAVN 261
           +K L  IFNF  +VC  G + L   ++
Sbjct: 8   IKYLLFIFNFVFAVCGLGILTLGVLIH 34


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 506 IPFFICALLDTFC 468
           +PFF C ++D  C
Sbjct: 633 LPFFTCNIMDAIC 645


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 568 FISSSIPVHLFSMVCPTPLVSFG 636
           F+   + +   S + P+P+V FG
Sbjct: 61  FLEMGVDMFWLSPIYPSPMVDFG 83


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 568 FISSSIPVHLFSMVCPTPLVSFG 636
           F+   + +   S + P+P+V FG
Sbjct: 61  FLEMGVDMFWLSPIYPSPMVDFG 83


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,916
Number of Sequences: 438
Number of extensions: 4487
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)