Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16m02f
         (782 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81077-14|CAN99679.1|  662|Caenorhabditis elegans Hypothetical p...    58   5e-09
Z81077-1|CAB03066.2|  658|Caenorhabditis elegans Hypothetical pr...    58   5e-09
Z81077-15|CAN99680.1|  664|Caenorhabditis elegans Hypothetical p...    57   2e-08
Z81077-2|CAD56583.2|  656|Caenorhabditis elegans Hypothetical pr...    55   7e-08
L14745-11|AAA27919.2|  315|Caenorhabditis elegans Hypothetical p...    52   5e-07
Z68295-1|CAA92587.1|  325|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AC024811-1|AAF60776.1|  494|Caenorhabditis elegans Dnaj domain (...    28   6.6  
Z82266-12|CAB05185.2| 1080|Caenorhabditis elegans Hypothetical p...    28   8.7  
AC024876-6|AAS80337.1|  181|Caenorhabditis elegans Hypothetical ...    28   8.7  

>Z81077-14|CAN99679.1|  662|Caenorhabditis elegans Hypothetical
           protein F36A2.1c protein.
          Length = 662

 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 42/137 (30%), Positives = 76/137 (55%), Gaps = 8/137 (5%)
 Frame = +2

Query: 386 RLMQLKD-TQESIQSLSSWCL--KQRTHHKKIVSSWLNVLKRVKIE-QRLVLFYLANDVV 553
           RL  +K+ TQE+I+++S W +  K       IV  WLN  K    + +R+ LFY+ NDVV
Sbjct: 12  RLQDVKNPTQEAIETMSMWIMHYKDNASIDLIVDGWLNCFKTAGTDNKRIALFYVMNDVV 71

Query: 554 QYSKRKGYD-FVESWGLYLQKATPLVR-DEKVRPKILRIFKIWEQRSVYDDEFLSDLTGL 727
           Q +K K  D  + ++   +  A  + R  +KV+  + R  +I++ R+V+     + +  L
Sbjct: 72  QKAKMKHADTLIPAFQPAVLTAVGIGRKQDKVKAVMKRCIQIFKSRNVFSPASTTAMENL 131

Query: 728 LSAGAIK--KSDDDALD 772
           L++ A +  +++D AL+
Sbjct: 132 LASDADEGYEAEDQALE 148


>Z81077-1|CAB03066.2|  658|Caenorhabditis elegans Hypothetical
           protein F36A2.1a protein.
          Length = 658

 Score = 58.4 bits (135), Expect = 5e-09
 Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 6/135 (4%)
 Frame = +2

Query: 386 RLMQLKD-TQESIQSLSSWCL--KQRTHHKKIVSSWLNVLKRVKIE-QRLVLFYLANDVV 553
           RL  +K+ TQE+I+++S W +  K       IV  WLN  K    + +R+ LFY+ NDVV
Sbjct: 12  RLQDVKNPTQEAIETMSMWIMHYKDNASIDLIVDGWLNCFKTAGTDNKRIALFYVMNDVV 71

Query: 554 QYSKRKGYD-FVESWGLYLQKATPLVR-DEKVRPKILRIFKIWEQRSVYDDEFLSDLTGL 727
           Q +K K  D  + ++   +  A  + R  +KV+  + R  +I++ R+V+     + +  L
Sbjct: 72  QKAKMKHADTLIPAFQPAVLTAVGIGRKQDKVKAVMKRCIQIFKSRNVFSPASTTAMENL 131

Query: 728 LSAGAIKKSDDDALD 772
           L  G   +++D AL+
Sbjct: 132 LDEG--YEAEDQALE 144


>Z81077-15|CAN99680.1|  664|Caenorhabditis elegans Hypothetical
           protein F36A2.1d protein.
          Length = 664

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 41/134 (30%), Positives = 75/134 (55%), Gaps = 8/134 (5%)
 Frame = +2

Query: 395 QLKD-TQESIQSLSSWCL--KQRTHHKKIVSSWLNVLKRVKIE-QRLVLFYLANDVVQYS 562
           Q+K+ TQE+I+++S W +  K       IV  WLN  K    + +R+ LFY+ NDVVQ +
Sbjct: 17  QVKNPTQEAIETMSMWIMHYKDNASIDLIVDGWLNCFKTAGTDNKRIALFYVMNDVVQKA 76

Query: 563 KRKGYD-FVESWGLYLQKATPLVR-DEKVRPKILRIFKIWEQRSVYDDEFLSDLTGLLSA 736
           K K  D  + ++   +  A  + R  +KV+  + R  +I++ R+V+     + +  LL++
Sbjct: 77  KMKHADTLIPAFQPAVLTAVGIGRKQDKVKAVMKRCIQIFKSRNVFSPASTTAMENLLAS 136

Query: 737 GAIK--KSDDDALD 772
            A +  +++D AL+
Sbjct: 137 DADEGYEAEDQALE 150


>Z81077-2|CAD56583.2|  656|Caenorhabditis elegans Hypothetical
           protein F36A2.1b protein.
          Length = 656

 Score = 54.8 bits (126), Expect = 7e-08
 Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
 Frame = +2

Query: 386 RLMQLKD-TQESIQSLSSWCL--KQRTHHKKIVSSWLNVLKRVKIE-QRLVLFYLANDVV 553
           RL  +K+ TQE+I+++S W +  K       IV  WLN  K    + +R+ LFY+ NDVV
Sbjct: 12  RLQDVKNPTQEAIETMSMWIMHYKDNASIDLIVDGWLNCFKTAGTDNKRIALFYVMNDVV 71

Query: 554 QYSKRKGYD-FVESWGLYLQKATPLVR-DEKVRPKILRIFKIWEQRSVYDDEFLSDLTGL 727
           Q +K K  D  + ++   +  A  + R  +KV+  + R  +I++ R+V+     + +  L
Sbjct: 72  QKAKMKHADTLIPAFQPAVLTAVGIGRKQDKVKAVMKRCIQIFKSRNVFSPASTTAMENL 131

Query: 728 LSAGAIKKSDDDALD 772
           L      +++D AL+
Sbjct: 132 LG----YEAEDQALE 142


>L14745-11|AAA27919.2|  315|Caenorhabditis elegans Hypothetical
           protein C02F5.4 protein.
          Length = 315

 Score = 52.0 bits (119), Expect = 5e-07
 Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
 Frame = +2

Query: 359 DFNTLAFEKRLMQLKDTQESIQSLSSWCLKQRTHHKKIVSSWLNVLKRVKIEQRLV-LFY 535
           DF      ++L  L +   SIQ+ S+W L+  ++ + I+  WL  +K+     ++V L Y
Sbjct: 3   DFTEQTLRQKLTNLSNHPSSIQTTSAWLLQNHSNRELIIRVWLKTVKKETHGSKIVNLLY 62

Query: 536 LANDVVQYSKRKGYDFVESWGLYLQK----ATPLVRDEKVRPKILRIFKIWEQRSVY 694
           +ANDV Q +++    F + +   ++     A  L   ++V   I ++  +W+ R ++
Sbjct: 63  VANDVSQNARKTCPQFKDEFFPAIESSFRHAIELKNAKEVEHAIGKLINVWKDRQIF 119


>Z68295-1|CAA92587.1|  325|Caenorhabditis elegans Hypothetical
           protein C07C7.1 protein.
          Length = 325

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +2

Query: 431 SSWCLKQRTHHKKIVSSWLNVLKRVKIEQRLVLFYLANDVVQY 559
           +S+ L Q T   KI    +N+LK +KIE R V+F   N VV++
Sbjct: 241 TSFVLYQGTS-AKIEYKDVNMLKEMKIEDRKVIFEFCNFVVKF 282


>AC024811-1|AAF60776.1|  494|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 28 protein.
          Length = 494

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +2

Query: 353 TEDFNTLAFEKRLMQLK--DTQESIQSLSSWCLKQRTHHKKIVSSWLNVLKRVK 508
           + D   L FE   ++ K  D ++S+ S+   CLK    HKK  +S+ ++ K VK
Sbjct: 205 SSDNTELLFEMSELEYKVADVRDSLGSIRE-CLKLNPDHKKCYTSYKSLKKIVK 257


>Z82266-12|CAB05185.2| 1080|Caenorhabditis elegans Hypothetical
           protein F23B2.11 protein.
          Length = 1080

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 242 SVICNIYQFKKPLNKYKRKKMRLETALTA 156
           ++I N Y FK+ LNK  RK   ++ ++TA
Sbjct: 17  AIIPNHYHFKEHLNKGARKNGNIDASITA 45


>AC024876-6|AAS80337.1|  181|Caenorhabditis elegans Hypothetical
           protein Y94H6A.10 protein.
          Length = 181

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = +2

Query: 77  TKLKPFMINVTEKNCVYVNVNVKSNPE 157
           ++++P +IN   + CVY+N++ +  PE
Sbjct: 3   SRVRPIIINDPNQLCVYINLHDEKKPE 29


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,005,279
Number of Sequences: 27780
Number of extensions: 322109
Number of successful extensions: 802
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)