Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16l24f
(463 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41557-9|AAA83309.1| 479|Caenorhabditis elegans Hypothetical pr... 114 3e-26
AF099915-3|AAC68766.1| 475|Caenorhabditis elegans Hypothetical ... 111 3e-25
AL132904-15|CAC35848.2| 518|Caenorhabditis elegans Hypothetical... 30 0.70
U61949-6|AAB03154.1| 166|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF040641-4|AAB94945.1| 451|Caenorhabditis elegans Hypothetical ... 27 4.9
AF040641-3|AAT81205.1| 509|Caenorhabditis elegans Hypothetical ... 27 4.9
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 27 8.6
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 27 8.6
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 27 8.6
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 27 8.6
>U41557-9|AAA83309.1| 479|Caenorhabditis elegans Hypothetical
protein C50F7.10 protein.
Length = 479
Score = 114 bits (274), Expect = 3e-26
Identities = 52/123 (42%), Positives = 77/123 (62%)
Frame = +1
Query: 82 RFPDDFLIGTATASYQIEGAWNEDGKGENIWDYLTHNNPAAVKDGSTGDIAANSYHNVER 261
+FP +F + TATA+YQIEGA N DG+G + WD + N + D S D++ +
Sbjct: 6 KFPKNFQLATATAAYQIEGAKNLDGRGFSTWDSIRSEN-GRIHDNSDPDLSCEGRLKYKE 64
Query: 262 DVEMMRELGLDVYRFSLSWSRILPSGFAXEINEAGVDYYNRLINEMLKYGIXPMITLFHW 441
DV ++ ++G+ YRFS+SWSRILP G INE G+ +Y + + GI P++TLFH+
Sbjct: 65 DVALLSKIGVTSYRFSISWSRILPDGTLKTINEDGIQFYRDICLLLRDNGIEPIVTLFHF 124
Query: 442 DLP 450
D+P
Sbjct: 125 DMP 127
>AF099915-3|AAC68766.1| 475|Caenorhabditis elegans Hypothetical
protein E02H9.5 protein.
Length = 475
Score = 111 bits (266), Expect = 3e-25
Identities = 51/123 (41%), Positives = 78/123 (63%)
Frame = +1
Query: 82 RFPDDFLIGTATASYQIEGAWNEDGKGENIWDYLTHNNPAAVKDGSTGDIAANSYHNVER 261
+FP +F + TATA+YQIEGA + +G+G + WD + P + D S D++ + +
Sbjct: 6 KFPKNFKLATATAAYQIEGAKDLNGRGFSTWDAI-RLEPGRILDNSDPDLSCDGLLKYKE 64
Query: 262 DVEMMRELGLDVYRFSLSWSRILPSGFAXEINEAGVDYYNRLINEMLKYGIXPMITLFHW 441
DV ++ E+G+ YRFS+SWSRILP G INE G+ +Y L + + I P++TLFH+
Sbjct: 65 DVALLAEIGVTNYRFSISWSRILPDGTLSTINEEGIKFYRDLCLLLKENNIEPVVTLFHF 124
Query: 442 DLP 450
D+P
Sbjct: 125 DMP 127
>AL132904-15|CAC35848.2| 518|Caenorhabditis elegans Hypothetical
protein Y111B2A.19 protein.
Length = 518
Score = 30.3 bits (65), Expect = 0.70
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +1
Query: 118 ASYQIEGA--WNEDGKGENIWDYLTHNNPAAVKDGSTGDIAANSYHNVER 261
A YQ++ W+ D E++ D L+H NP + D N H + R
Sbjct: 459 ALYQMDAPDNWHHDDPSEDLDDLLSHENPETLDDTMRNSNTDNDLHLILR 508
>U61949-6|AAB03154.1| 166|Caenorhabditis elegans Hypothetical
protein F49E8.6 protein.
Length = 166
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +2
Query: 44 WCAAPHYRPSSREGFRMTSSSGLPPPPT 127
+CA P SS TSS LPPPPT
Sbjct: 126 YCAPPPGPSSSAPPTLPTSSGNLPPPPT 153
>AF040641-4|AAB94945.1| 451|Caenorhabditis elegans Hypothetical
protein D1069.3a protein.
Length = 451
Score = 27.5 bits (58), Expect = 4.9
Identities = 10/47 (21%), Positives = 22/47 (46%)
Frame = +1
Query: 73 QQRRFPDDFLIGTATASYQIEGAWNEDGKGENIWDYLTHNNPAAVKD 213
Q PD L+ + + ++ W+++ +GE +W H + +D
Sbjct: 295 QYEMLPDTLLVVNSLRNSLLDNMWSKEKRGELMWTRPQHKDQTKRRD 341
>AF040641-3|AAT81205.1| 509|Caenorhabditis elegans Hypothetical
protein D1069.3b protein.
Length = 509
Score = 27.5 bits (58), Expect = 4.9
Identities = 10/47 (21%), Positives = 22/47 (46%)
Frame = +1
Query: 73 QQRRFPDDFLIGTATASYQIEGAWNEDGKGENIWDYLTHNNPAAVKD 213
Q PD L+ + + ++ W+++ +GE +W H + +D
Sbjct: 295 QYEMLPDTLLVVNSLRNSLLDNMWSKEKRGELMWTRPQHKDQTKRRD 341
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Frame = +1
Query: 148 EDGKGENIWDYL-----THNNPAAVKDGSTGDIAANSYH 249
+DG+G N++++L TH + G T ANSY+
Sbjct: 2374 QDGQGSNLYNHLAAQLLTHQESSTGAPGPTSSQLANSYY 2412
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Frame = +1
Query: 148 EDGKGENIWDYL-----THNNPAAVKDGSTGDIAANSYH 249
+DG+G N++++L TH + G T ANSY+
Sbjct: 2396 QDGQGSNLYNHLAAQLLTHQESSTGAPGPTSSQLANSYY 2434
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Frame = +1
Query: 148 EDGKGENIWDYL-----THNNPAAVKDGSTGDIAANSYH 249
+DG+G N++++L TH + G T ANSY+
Sbjct: 1217 QDGQGSNLYNHLAAQLLTHQESSTGAPGPTSSQLANSYY 1255
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Frame = +1
Query: 148 EDGKGENIWDYL-----THNNPAAVKDGSTGDIAANSYH 249
+DG+G N++++L TH + G T ANSY+
Sbjct: 1195 QDGQGSNLYNHLAAQLLTHQESSTGAPGPTSSQLANSYY 1233
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Frame = +1
Query: 148 EDGKGENIWDYL-----THNNPAAVKDGSTGDIAANSYH 249
+DG+G N++++L TH + G T ANSY+
Sbjct: 2374 QDGQGSNLYNHLAAQLLTHQESSTGAPGPTSSQLANSYY 2412
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Frame = +1
Query: 148 EDGKGENIWDYL-----THNNPAAVKDGSTGDIAANSYH 249
+DG+G N++++L TH + G T ANSY+
Sbjct: 2396 QDGQGSNLYNHLAAQLLTHQESSTGAPGPTSSQLANSYY 2434
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 115 TASYQIEGAWNEDGKGENIWDYLTHNNP 198
T +I G WN KGEN L H P
Sbjct: 4566 TKEEEIVGLWNTGTKGENASKVLPHKPP 4593
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,777,128
Number of Sequences: 27780
Number of extensions: 141927
Number of successful extensions: 469
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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