Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16l16f
(690 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X98001-1|CAA66638.1| 331|Homo sapiens geranylgeranyl transferas... 190 3e-48
CR456941-1|CAG33222.1| 331|Homo sapiens RABGGTB protein. 190 3e-48
BC020790-1|AAH20790.1| 331|Homo sapiens Rab geranylgeranyltrans... 190 3e-48
AL357314-5|CAI22393.1| 331|Homo sapiens Rab geranylgeranyltrans... 190 3e-48
AB209023-1|BAD92260.1| 320|Homo sapiens Rab geranylgeranyltrans... 190 3e-48
U49245-1|AAA91473.1| 331|Homo sapiens geranylgeranyl transferas... 189 9e-48
Y08201-1|CAA69383.1| 331|Homo sapiens rab geranylgeranyl transf... 186 7e-47
AL357314-4|CAI22392.1| 152|Homo sapiens Rab geranylgeranyltrans... 105 2e-22
L10414-1|AAA86286.1| 387|Homo sapiens farnesyl-protein transfer... 87 6e-17
L00635-1|AAA35854.1| 437|Homo sapiens farnesyl-protein transfer... 87 6e-17
BC020232-1|AAH20232.1| 437|Homo sapiens farnesyltransferase, CA... 87 6e-17
L25441-1|AAA35888.1| 377|Homo sapiens geranylgeranyltransferase... 61 3e-09
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 30 8.9
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein. 30 8.9
>X98001-1|CAA66638.1| 331|Homo sapiens geranylgeranyl transferase
II protein.
Length = 331
Score = 190 bits (464), Expect = 3e-48
Identities = 79/127 (62%), Positives = 102/127 (80%)
Frame = +2
Query: 308 IKVLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDA 487
+++L +YD ++ +D+ +V Y+ LQ+EDGSF GD WGEIDTRFSFCAV L+LL +LDA
Sbjct: 102 VQILTLYDSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDA 161
Query: 488 IDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCE 667
I++ K +EFVLSCMNFDGGFG +PGSESHAG IYCC G L+I ++ +++D L WWLCE
Sbjct: 162 INVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCE 221
Query: 668 RQLPSGG 688
RQLPSGG
Sbjct: 222 RQLPSGG 228
Score = 105 bits (251), Expect = 2e-22
Identities = 45/65 (69%), Positives = 52/65 (80%)
Frame = +3
Query: 120 MSFTTKDVVLKEDRPKTLLLQKHSDYLASYGLNKDDYEYCMTEYLRMSGIYWSLTAMELM 299
M KDV++K D P TLLL+KH+DY+ASYG KDDYEYCM+EYLRMSGIYW LT M+LM
Sbjct: 1 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 60
Query: 300 GQSSR 314
GQ R
Sbjct: 61 GQLHR 65
Score = 56.4 bits (130), Expect = 9e-08
Identities = 30/113 (26%), Positives = 55/113 (48%)
Frame = +2
Query: 308 IKVLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDA 487
+ V+ + +L ++ E I+ +I S Q E G + ++ AV L+L ++
Sbjct: 54 LTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINV 113
Query: 488 IDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADE 646
ID+NK VE+V DG F E +C V TL++ ++DA++ ++
Sbjct: 114 IDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEK 166
>CR456941-1|CAG33222.1| 331|Homo sapiens RABGGTB protein.
Length = 331
Score = 190 bits (464), Expect = 3e-48
Identities = 79/127 (62%), Positives = 102/127 (80%)
Frame = +2
Query: 308 IKVLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDA 487
+++L +YD ++ +D+ +V Y+ LQ+EDGSF GD WGEIDTRFSFCAV L+LL +LDA
Sbjct: 102 VQILTLYDSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDA 161
Query: 488 IDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCE 667
I++ K +EFVLSCMNFDGGFG +PGSESHAG IYCC G L+I ++ +++D L WWLCE
Sbjct: 162 INVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCE 221
Query: 668 RQLPSGG 688
RQLPSGG
Sbjct: 222 RQLPSGG 228
Score = 105 bits (251), Expect = 2e-22
Identities = 45/65 (69%), Positives = 52/65 (80%)
Frame = +3
Query: 120 MSFTTKDVVLKEDRPKTLLLQKHSDYLASYGLNKDDYEYCMTEYLRMSGIYWSLTAMELM 299
M KDV++K D P TLLL+KH+DY+ASYG KDDYEYCM+EYLRMSGIYW LT M+LM
Sbjct: 1 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 60
Query: 300 GQSSR 314
GQ R
Sbjct: 61 GQLHR 65
Score = 56.4 bits (130), Expect = 9e-08
Identities = 30/113 (26%), Positives = 55/113 (48%)
Frame = +2
Query: 308 IKVLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDA 487
+ V+ + +L ++ E I+ +I S Q E G + ++ AV L+L ++
Sbjct: 54 LTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINV 113
Query: 488 IDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADE 646
ID+NK VE+V DG F E +C V TL++ ++DA++ ++
Sbjct: 114 IDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEK 166
>BC020790-1|AAH20790.1| 331|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 331
Score = 190 bits (464), Expect = 3e-48
Identities = 79/127 (62%), Positives = 102/127 (80%)
Frame = +2
Query: 308 IKVLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDA 487
+++L +YD ++ +D+ +V Y+ LQ+EDGSF GD WGEIDTRFSFCAV L+LL +LDA
Sbjct: 102 VQILTLYDSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDA 161
Query: 488 IDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCE 667
I++ K +EFVLSCMNFDGGFG +PGSESHAG IYCC G L+I ++ +++D L WWLCE
Sbjct: 162 INVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCE 221
Query: 668 RQLPSGG 688
RQLPSGG
Sbjct: 222 RQLPSGG 228
Score = 105 bits (251), Expect = 2e-22
Identities = 45/65 (69%), Positives = 52/65 (80%)
Frame = +3
Query: 120 MSFTTKDVVLKEDRPKTLLLQKHSDYLASYGLNKDDYEYCMTEYLRMSGIYWSLTAMELM 299
M KDV++K D P TLLL+KH+DY+ASYG KDDYEYCM+EYLRMSGIYW LT M+LM
Sbjct: 1 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 60
Query: 300 GQSSR 314
GQ R
Sbjct: 61 GQLHR 65
Score = 56.4 bits (130), Expect = 9e-08
Identities = 30/113 (26%), Positives = 55/113 (48%)
Frame = +2
Query: 308 IKVLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDA 487
+ V+ + +L ++ E I+ +I S Q E G + ++ AV L+L ++
Sbjct: 54 LTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINV 113
Query: 488 IDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADE 646
ID+NK VE+V DG F E +C V TL++ ++DA++ ++
Sbjct: 114 IDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEK 166
>AL357314-5|CAI22393.1| 331|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 331
Score = 190 bits (464), Expect = 3e-48
Identities = 79/127 (62%), Positives = 102/127 (80%)
Frame = +2
Query: 308 IKVLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDA 487
+++L +YD ++ +D+ +V Y+ LQ+EDGSF GD WGEIDTRFSFCAV L+LL +LDA
Sbjct: 102 VQILTLYDSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDA 161
Query: 488 IDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCE 667
I++ K +EFVLSCMNFDGGFG +PGSESHAG IYCC G L+I ++ +++D L WWLCE
Sbjct: 162 INVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCE 221
Query: 668 RQLPSGG 688
RQLPSGG
Sbjct: 222 RQLPSGG 228
Score = 105 bits (251), Expect = 2e-22
Identities = 45/65 (69%), Positives = 52/65 (80%)
Frame = +3
Query: 120 MSFTTKDVVLKEDRPKTLLLQKHSDYLASYGLNKDDYEYCMTEYLRMSGIYWSLTAMELM 299
M KDV++K D P TLLL+KH+DY+ASYG KDDYEYCM+EYLRMSGIYW LT M+LM
Sbjct: 1 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 60
Query: 300 GQSSR 314
GQ R
Sbjct: 61 GQLHR 65
Score = 56.4 bits (130), Expect = 9e-08
Identities = 30/113 (26%), Positives = 55/113 (48%)
Frame = +2
Query: 308 IKVLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDA 487
+ V+ + +L ++ E I+ +I S Q E G + ++ AV L+L ++
Sbjct: 54 LTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINV 113
Query: 488 IDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADE 646
ID+NK VE+V DG F E +C V TL++ ++DA++ ++
Sbjct: 114 IDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEK 166
>AB209023-1|BAD92260.1| 320|Homo sapiens Rab
geranylgeranyltransferase, beta subunit variant protein.
Length = 320
Score = 190 bits (464), Expect = 3e-48
Identities = 79/127 (62%), Positives = 102/127 (80%)
Frame = +2
Query: 308 IKVLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDA 487
+++L +YD ++ +D+ +V Y+ LQ+EDGSF GD WGEIDTRFSFCAV L+LL +LDA
Sbjct: 102 VQILTLYDSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDA 161
Query: 488 IDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCE 667
I++ K +EFVLSCMNFDGGFG +PGSESHAG IYCC G L+I ++ +++D L WWLCE
Sbjct: 162 INVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCE 221
Query: 668 RQLPSGG 688
RQLPSGG
Sbjct: 222 RQLPSGG 228
Score = 105 bits (251), Expect = 2e-22
Identities = 45/65 (69%), Positives = 52/65 (80%)
Frame = +3
Query: 120 MSFTTKDVVLKEDRPKTLLLQKHSDYLASYGLNKDDYEYCMTEYLRMSGIYWSLTAMELM 299
M KDV++K D P TLLL+KH+DY+ASYG KDDYEYCM+EYLRMSGIYW LT M+LM
Sbjct: 1 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 60
Query: 300 GQSSR 314
GQ R
Sbjct: 61 GQLHR 65
Score = 56.4 bits (130), Expect = 9e-08
Identities = 30/113 (26%), Positives = 55/113 (48%)
Frame = +2
Query: 308 IKVLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDA 487
+ V+ + +L ++ E I+ +I S Q E G + ++ AV L+L ++
Sbjct: 54 LTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINV 113
Query: 488 IDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADE 646
ID+NK VE+V DG F E +C V TL++ ++DA++ ++
Sbjct: 114 IDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEK 166
>U49245-1|AAA91473.1| 331|Homo sapiens geranylgeranyl transferase
type II beta-subunit protein.
Length = 331
Score = 189 bits (460), Expect = 9e-48
Identities = 78/127 (61%), Positives = 101/127 (79%)
Frame = +2
Query: 308 IKVLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDA 487
+++L +YD ++ +D+ +V Y+ LQ+EDGSF GD WGEIDTRFSFCAV +LL +LDA
Sbjct: 102 VQILTLYDSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATFALLGKLDA 161
Query: 488 IDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCE 667
I++ K +EFVLSCMNFDGGFG +PGSESHAG IYCC G L+I ++ +++D L WWLCE
Sbjct: 162 INVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCE 221
Query: 668 RQLPSGG 688
RQLPSGG
Sbjct: 222 RQLPSGG 228
Score = 105 bits (251), Expect = 2e-22
Identities = 45/65 (69%), Positives = 52/65 (80%)
Frame = +3
Query: 120 MSFTTKDVVLKEDRPKTLLLQKHSDYLASYGLNKDDYEYCMTEYLRMSGIYWSLTAMELM 299
M KDV++K D P TLLL+KH+DY+ASYG KDDYEYCM+EYLRMSGIYW LT M+LM
Sbjct: 1 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 60
Query: 300 GQSSR 314
GQ R
Sbjct: 61 GQLHR 65
Score = 54.8 bits (126), Expect = 3e-07
Identities = 29/113 (25%), Positives = 54/113 (47%)
Frame = +2
Query: 308 IKVLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDA 487
+ V+ + +L ++ E I+ +I S Q E G + ++ AV L+L ++
Sbjct: 54 LTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINV 113
Query: 488 IDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADE 646
ID+NK VE+V DG F E +C V T ++ ++DA++ ++
Sbjct: 114 IDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATFALLGKLDAINVEK 166
>Y08201-1|CAA69383.1| 331|Homo sapiens rab geranylgeranyl
transferase protein.
Length = 331
Score = 186 bits (453), Expect = 7e-47
Identities = 78/127 (61%), Positives = 100/127 (78%)
Frame = +2
Query: 308 IKVLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDA 487
+++L +YD ++ +D+ +V Y+ LQ+EDGSF GD WGEIDTRFSFCAV L+LL +LDA
Sbjct: 102 VQILTLYDSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDA 161
Query: 488 IDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCE 667
I++ K +EFVLSCMN DGGFG +PGSESHAG IYCC G L+I ++ + +D L WWLCE
Sbjct: 162 INVEKAIEFVLSCMNSDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVTSDLLGWWLCE 221
Query: 668 RQLPSGG 688
RQLPSGG
Sbjct: 222 RQLPSGG 228
Score = 105 bits (251), Expect = 2e-22
Identities = 45/65 (69%), Positives = 52/65 (80%)
Frame = +3
Query: 120 MSFTTKDVVLKEDRPKTLLLQKHSDYLASYGLNKDDYEYCMTEYLRMSGIYWSLTAMELM 299
M KDV++K D P TLLL+KH+DY+ASYG KDDYEYCM+EYLRMSGIYW LT M+LM
Sbjct: 1 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 60
Query: 300 GQSSR 314
GQ R
Sbjct: 61 GQLHR 65
Score = 56.8 bits (131), Expect = 7e-08
Identities = 32/127 (25%), Positives = 59/127 (46%)
Frame = +2
Query: 308 IKVLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDA 487
+ V+ + +L ++ E I+ +I S Q E G + ++ AV L+L ++
Sbjct: 54 LTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINV 113
Query: 488 IDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCE 667
ID+NK VE+V DG F E +C V TL++ ++DA++ ++ ++
Sbjct: 114 IDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLS 173
Query: 668 RQLPSGG 688
GG
Sbjct: 174 CMNSDGG 180
>AL357314-4|CAI22392.1| 152|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 152
Score = 105 bits (251), Expect = 2e-22
Identities = 45/65 (69%), Positives = 52/65 (80%)
Frame = +3
Query: 120 MSFTTKDVVLKEDRPKTLLLQKHSDYLASYGLNKDDYEYCMTEYLRMSGIYWSLTAMELM 299
M KDV++K D P TLLL+KH+DY+ASYG KDDYEYCM+EYLRMSGIYW LT M+LM
Sbjct: 1 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 60
Query: 300 GQSSR 314
GQ R
Sbjct: 61 GQLHR 65
Score = 52.0 bits (119), Expect = 2e-06
Identities = 20/45 (44%), Positives = 32/45 (71%)
Frame = +2
Query: 308 IKVLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFS 442
+++L +YD ++ +D+ +V Y+ LQ+EDGSF GD WG + RFS
Sbjct: 102 VQILTLYDSINVIDVNKVVEYVKGLQKEDGSFAGDIWGNV--RFS 144
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = +2
Query: 308 IKVLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDA 487
+ V+ + +L ++ E I+ +I S Q E G + ++ AV L+L ++
Sbjct: 54 LTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINV 113
Query: 488 IDINKTVEFVLSCMNFDGGF 547
ID+NK VE+V DG F
Sbjct: 114 IDVNKVVEYVKGLQKEDGSF 133
>L10414-1|AAA86286.1| 387|Homo sapiens farnesyl-protein transferase
beta-subunit protein.
Length = 387
Score = 87.0 bits (206), Expect = 6e-17
Identities = 40/121 (33%), Positives = 65/121 (53%)
Frame = +2
Query: 314 VLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAID 493
++ + D ++ E +++Y+ SL+Q DGSF GE+D R ++CA SL +
Sbjct: 112 IIGTEEAYDIINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDL 171
Query: 494 INKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQ 673
T E++ C N++GG G PG E+H G +C + L I KR +L+ L W+ RQ
Sbjct: 172 FEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQ 231
Query: 674 L 676
+
Sbjct: 232 M 232
Score = 33.5 bits (73), Expect = 0.73
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 509 EFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSIC---KRMDALHADELAWWLCERQLP 679
+F+ C + +GGFG PG H Y V L I + D ++ ++L +L + P
Sbjct: 78 QFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQP 137
Query: 680 SG 685
G
Sbjct: 138 DG 139
Score = 30.3 bits (65), Expect = 6.8
Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 3/113 (2%)
Frame = +2
Query: 359 IVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAIDI---NKTVEFVLSCM 529
+ +++ Q +G F G ++ AV L ++ +A DI K ++++ S
Sbjct: 76 VCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLK 135
Query: 530 NFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPSGG 688
DG F G E YC S+ + + A W+ Q GG
Sbjct: 136 QPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGG 188
>L00635-1|AAA35854.1| 437|Homo sapiens farnesyl-protein transferase
beta-subunit protein.
Length = 437
Score = 87.0 bits (206), Expect = 6e-17
Identities = 40/121 (33%), Positives = 65/121 (53%)
Frame = +2
Query: 314 VLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAID 493
++ + D ++ E +++Y+ SL+Q DGSF GE+D R ++CA SL +
Sbjct: 162 IIGTEEAYDIINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDL 221
Query: 494 INKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQ 673
T E++ C N++GG G PG E+H G +C + L I KR +L+ L W+ RQ
Sbjct: 222 FEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQ 281
Query: 674 L 676
+
Sbjct: 282 M 282
Score = 33.5 bits (73), Expect = 0.73
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 509 EFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSIC---KRMDALHADELAWWLCERQLP 679
+F+ C + +GGFG PG H Y V L I + D ++ ++L +L + P
Sbjct: 128 QFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQP 187
Query: 680 SG 685
G
Sbjct: 188 DG 189
Score = 30.3 bits (65), Expect = 6.8
Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 3/113 (2%)
Frame = +2
Query: 359 IVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAIDI---NKTVEFVLSCM 529
+ +++ Q +G F G ++ AV L ++ +A DI K ++++ S
Sbjct: 126 VCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLK 185
Query: 530 NFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPSGG 688
DG F G E YC S+ + + A W+ Q GG
Sbjct: 186 QPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGG 238
>BC020232-1|AAH20232.1| 437|Homo sapiens farnesyltransferase, CAAX
box, beta protein.
Length = 437
Score = 87.0 bits (206), Expect = 6e-17
Identities = 40/121 (33%), Positives = 65/121 (53%)
Frame = +2
Query: 314 VLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAID 493
++ + D ++ E +++Y+ SL+Q DGSF GE+D R ++CA SL +
Sbjct: 162 IIGTEEAYDIINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDL 221
Query: 494 INKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQ 673
T E++ C N++GG G PG E+H G +C + L I KR +L+ L W+ RQ
Sbjct: 222 FEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQ 281
Query: 674 L 676
+
Sbjct: 282 M 282
Score = 33.5 bits (73), Expect = 0.73
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 509 EFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSIC---KRMDALHADELAWWLCERQLP 679
+F+ C + +GGFG PG H Y V L I + D ++ ++L +L + P
Sbjct: 128 QFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQP 187
Query: 680 SG 685
G
Sbjct: 188 DG 189
Score = 30.3 bits (65), Expect = 6.8
Identities = 25/113 (22%), Positives = 43/113 (38%), Gaps = 3/113 (2%)
Frame = +2
Query: 359 IVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAIDI---NKTVEFVLSCM 529
+ +++ Q +G F G ++ AV L ++ +A DI K ++++ S
Sbjct: 126 VCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLK 185
Query: 530 NFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPSGG 688
DG F G E YC S+ + + A W+ Q GG
Sbjct: 186 QPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGG 238
>L25441-1|AAA35888.1| 377|Homo sapiens geranylgeranyltransferase
type I beta-subunit protein.
Length = 377
Score = 61.3 bits (142), Expect = 3e-09
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Frame = +2
Query: 329 DRLDAVDIEGIVRYIVSLQQEDGSFYGDKWG-EIDTRFSFCAVMCLSLLQRLDAIDINKT 505
D L V+ E + + +LQ EDGSF G E D RF +CA +L +D+ K
Sbjct: 137 DDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKA 196
Query: 506 VEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADE 646
+ ++ M++D G G ESH G +C + +L + +++ + +++
Sbjct: 197 ITYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEK 243
Score = 30.3 bits (65), Expect = 6.8
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = +2
Query: 347 DIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSC 526
++ I R+ + ++Q++G ++G +DT +SF L LL+ + K ++LS
Sbjct: 244 ELNRIKRWCI-MRQQNG-YHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILST 301
Query: 527 MN-FDGGFGSKPGSESHAGLIYCCVGTLSI 613
+ GGF P S A Y + LS+
Sbjct: 302 QDRLVGGFAKWPDSHPDALHAYFGICGLSL 331
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 29.9 bits (64), Expect = 8.9
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -1
Query: 582 RPAWLSDPGLEPNPPSKF--MQLSTNSTVL--LMSMASNRCKSDRHITAQKE 439
+P SDP EP+PP K +++ NS L L + K D +IT+ +E
Sbjct: 19715 KPVLASDPLSEPDPPRKLEVTEMTKNSATLAWLPPLRDGGAKIDGYITSYRE 19766
>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
Length = 26926
Score = 29.9 bits (64), Expect = 8.9
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -1
Query: 582 RPAWLSDPGLEPNPPSKF--MQLSTNSTVL--LMSMASNRCKSDRHITAQKE 439
+P SDP EP+PP K +++ NS L L + K D +IT+ +E
Sbjct: 12291 KPVLASDPLSEPDPPRKLEVTEMTKNSATLAWLPPLRDGGAKIDGYITSYRE 12342
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,438,968
Number of Sequences: 237096
Number of extensions: 2119220
Number of successful extensions: 4413
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4405
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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