Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16l03r
(885 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 24 2.1
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 24 2.1
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 24 2.1
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 24 2.1
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 24 2.1
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 24 2.1
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 24 2.1
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 24 2.1
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 6.5
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 6.5
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 6.5
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 6.5
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 6.5
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 6.5
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 6.5
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 6.5
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 8.6
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 8.6
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 641 YNNTYTPKYISTNY 682
YNN Y P Y + NY
Sbjct: 94 YNNNYKPLYYNINY 107
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 641 YNNTYTPKYISTNY 682
YNN Y P Y + NY
Sbjct: 94 YNNNYKPLYYNINY 107
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 641 YNNTYTPKYISTNY 682
YNN Y P Y + NY
Sbjct: 94 YNNNYKPLYYNINY 107
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 641 YNNTYTPKYISTNY 682
YNN Y P Y + NY
Sbjct: 94 YNNNYKPLYYNINY 107
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 641 YNNTYTPKYISTNY 682
YNN Y P Y + NY
Sbjct: 327 YNNNYKPLYYNINY 340
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 641 YNNTYTPKYISTNY 682
YNN Y P Y + NY
Sbjct: 327 YNNNYKPLYYNINY 340
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 641 YNNTYTPKYISTNY 682
YNN Y P Y + NY
Sbjct: 327 YNNNYKPLYYNINY 340
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 641 YNNTYTPKYISTNY 682
YNN Y P Y + NY
Sbjct: 316 YNNNYKPLYYNINY 329
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 641 YNNTYTPKYISTNYYIIL 694
YNN Y Y YY I+
Sbjct: 97 YNNNYNTNYKKLQYYNII 114
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 641 YNNTYTPKYISTNYYIIL 694
YNN Y Y YY I+
Sbjct: 97 YNNNYNTNYKKLQYYNII 114
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 641 YNNTYTPKYISTNYYIIL 694
YNN Y Y YY I+
Sbjct: 97 YNNNYNTNYKKLQYYNII 114
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 641 YNNTYTPKYISTNYYIIL 694
YNN Y Y YY I+
Sbjct: 97 YNNNYNTNYKKLQYYNII 114
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 641 YNNTYTPKYISTNYYIIL 694
YNN Y Y YY I+
Sbjct: 97 YNNNYNTNYKKLQYYNII 114
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 641 YNNTYTPKYISTNYYIIL 694
YNN Y Y YY I+
Sbjct: 97 YNNNYNTNYKKLQYYNII 114
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 641 YNNTYTPKYISTNYYIIL 694
YNN Y Y YY I+
Sbjct: 101 YNNNYNTNYKKLQYYNII 118
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +2
Query: 641 YNNTYTPKYISTNYYIIL 694
YNN Y Y YY I+
Sbjct: 97 YNNNYNTNYKKLQYYNII 114
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.6
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = -1
Query: 534 LMFCISSDV*IYLYILVYHVKCSVQIKFIYLMSSQIR*IFKKY 406
+MF ++S V + + +L++H + + Y+M S I+ +F ++
Sbjct: 264 IMFMVASSVVLTVLVLIFHHRTPDR----YVMPSWIKMLFLQW 302
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.6
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = -1
Query: 534 LMFCISSDV*IYLYILVYHVKCSVQIKFIYLMSSQIR*IFKKY 406
+MF ++S V + + +L++H + + Y+M S I+ +F ++
Sbjct: 264 IMFMVASSVVLTVLVLIFHHRTPDR----YVMPSWIKMLFLQW 302
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.6
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = -1
Query: 534 LMFCISSDV*IYLYILVYHVKCSVQIKFIYLMSSQIR*IFKKY 406
+MF ++S V + + +L++H + + Y+M S I+ +F ++
Sbjct: 264 IMFMVASSVVLTVLVLIFHHRTPDR----YVMPSWIKMLFLQW 302
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.6
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = -1
Query: 534 LMFCISSDV*IYLYILVYHVKCSVQIKFIYLMSSQIR*IFKKY 406
+MF ++S V + + +L++H + + Y+M S I+ +F ++
Sbjct: 264 IMFMVASSVVLTVLVLIFHHRTPDR----YVMPSWIKMLFLQW 302
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.6
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = -1
Query: 534 LMFCISSDV*IYLYILVYHVKCSVQIKFIYLMSSQIR*IFKKY 406
+MF ++S V + + +L++H + + Y+M S I+ +F ++
Sbjct: 264 IMFMVASSVVLTVLVLIFHHRTPDR----YVMPSWIKMLFLQW 302
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 8.6
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = -1
Query: 534 LMFCISSDV*IYLYILVYHVKCSVQIKFIYLMSSQIR*IFKKY 406
+MF ++S V + + +L++H + + Y+M S I+ +F ++
Sbjct: 264 IMFMVASSVVLTVLVLIFHHRTPDR----YVMPSWIKMLFLQW 302
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 641 YNNTYTPKYISTNY 682
YNN Y P + + NY
Sbjct: 327 YNNNYKPLHYNINY 340
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,982
Number of Sequences: 438
Number of extensions: 4779
Number of successful extensions: 38
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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