Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16k24f
         (418 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    46   2e-07
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   3.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   5.6  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   7.4  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 46.0 bits (104), Expect = 2e-07
 Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
 Frame = +3

Query: 63  YPTYDDTRPNLVQPNDISLLRLHRPVVFTRYLQP--IRVQSSADAFRNYDGLTVYASGHG 236
           +P YD    +  Q NDI+LL+  + + F   + P  +  Q   D+F   D +TV   GH 
Sbjct: 242 HPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACLPFQHFLDSFAGSD-VTVLGWGHT 300

Query: 237 RLWTNGATPEVLNWVYLRAVXNPTCALNFGTLITPNAICARFFNVTSQSTCQGDSGGP 410
               NG    +L    L  +    C   +G ++  NA+CA       +  CQ DSGGP
Sbjct: 301 SF--NGMLSHILQKTTLNMLTQVECYKYYGNIMV-NAMCA---YAKGKDACQMDSGGP 352


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +2

Query: 212 HRVCQRSWSSLDEWCYSR 265
           H+ C R W  +   C SR
Sbjct: 18  HQRCSRDWFRISAGCVSR 35


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +3

Query: 9   VTNLTTPEYISESTEWYNYPTYDDTRP 89
           ++   TP +  E   +Y  P+YD   P
Sbjct: 394 ISGSATPVFHQEMALYYLKPSYDAQEP 420


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 347 RIRRNQGAEVEGASRVGDSTQVYPVQDLGSST 252
           R RR   AE+  A R GD+    P  +  + T
Sbjct: 208 RARRKFIAEIAFAYRYGDAIPTVPYTETETET 239


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,903
Number of Sequences: 438
Number of extensions: 2452
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)