Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16k22f
(755 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC027588-1|AAH27588.1| 672|Homo sapiens hypothetical protein KI... 47 6e-05
AL109935-4|CAB91047.2| 672|Homo sapiens novel protein protein. 47 6e-05
AB037855-1|BAA92672.1| 677|Homo sapiens KIAA1434 protein protein. 47 6e-05
BC096841-1|AAH96841.1| 395|Homo sapiens G protein-coupled recep... 32 2.6
AY507142-1|AAR92484.1| 395|Homo sapiens prostaglandin D2 recept... 32 2.6
AF144308-1|AAD34539.1| 395|Homo sapiens putative G protein-coup... 32 2.6
AF118265-1|AAD21055.1| 502|Homo sapiens orphan G protein-couple... 32 2.6
AB008535-1|BAA74518.1| 395|Homo sapiens CRTH2 protein. 32 2.6
AK090619-1|BAC03489.1| 648|Homo sapiens protein ( Homo sapiens ... 30 7.8
>BC027588-1|AAH27588.1| 672|Homo sapiens hypothetical protein
KIAA1434 protein.
Length = 672
Score = 47.2 bits (107), Expect = 6e-05
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Frame = +3
Query: 336 LKEKVF-VTGNTPELGEWDYTKIIMM--DYDEA-SNLWLKTLTIPNTCEVLYRYAICFLN 503
L +VF + G+ LG W+ + + + D S LW T+ + V YRY +
Sbjct: 15 LPGEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQYRYFKGYFL 74
Query: 504 ENSN-----DVFIRKWETNIHPRMIK--QTMLHPTQDVFGEYDKKQGISTGWLTNQTLIQ 662
E V + KWET++ PR I ++ + FG ++ + + +GWLT QT I+
Sbjct: 75 EPKTIGGPCQVIVHKWETHLQPRSITPLESEIIIDDGQFGIHNGVETLDSGWLTCQTEIR 134
Query: 663 FK--FSNNP--LQLKSRLAERLINIKVT 734
+ +S P K +L + +K+T
Sbjct: 135 LRLHYSEKPPVSITKKKLKKSRFRVKLT 162
>AL109935-4|CAB91047.2| 672|Homo sapiens novel protein protein.
Length = 672
Score = 47.2 bits (107), Expect = 6e-05
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Frame = +3
Query: 336 LKEKVF-VTGNTPELGEWDYTKIIMM--DYDEA-SNLWLKTLTIPNTCEVLYRYAICFLN 503
L +VF + G+ LG W+ + + + D S LW T+ + V YRY +
Sbjct: 15 LPGEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQYRYFKGYFL 74
Query: 504 ENSN-----DVFIRKWETNIHPRMIK--QTMLHPTQDVFGEYDKKQGISTGWLTNQTLIQ 662
E V + KWET++ PR I ++ + FG ++ + + +GWLT QT I+
Sbjct: 75 EPKTIGGPCQVIVHKWETHLQPRSITPLESEIIIDDGQFGIHNGVETLDSGWLTCQTEIR 134
Query: 663 FK--FSNNP--LQLKSRLAERLINIKVT 734
+ +S P K +L + +K+T
Sbjct: 135 LRLHYSEKPPVSITKKKLKKSRFRVKLT 162
>AB037855-1|BAA92672.1| 677|Homo sapiens KIAA1434 protein protein.
Length = 677
Score = 47.2 bits (107), Expect = 6e-05
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Frame = +3
Query: 336 LKEKVF-VTGNTPELGEWDYTKIIMM--DYDEA-SNLWLKTLTIPNTCEVLYRYAICFLN 503
L +VF + G+ LG W+ + + + D S LW T+ + V YRY +
Sbjct: 20 LPGEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQYRYFKGYFL 79
Query: 504 ENSN-----DVFIRKWETNIHPRMIK--QTMLHPTQDVFGEYDKKQGISTGWLTNQTLIQ 662
E V + KWET++ PR I ++ + FG ++ + + +GWLT QT I+
Sbjct: 80 EPKTIGGPCQVIVHKWETHLQPRSITPLESEIIIDDGQFGIHNGVETLDSGWLTCQTEIR 139
Query: 663 FK--FSNNP--LQLKSRLAERLINIKVT 734
+ +S P K +L + +K+T
Sbjct: 140 LRLHYSEKPPVSITKKKLKKSRFRVKLT 167
>BC096841-1|AAH96841.1| 395|Homo sapiens G protein-coupled receptor
44 protein.
Length = 395
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 301 HCWEISSAFCSGSGSDIFFSGLVFCIFLSSRKNQRCIILILPLFAICH 158
H WE+ + FC S F + LS+ RC+ ++ P++A H
Sbjct: 95 HSWELGTTFCKLHSSIFFLNMFASGFLLSAISLDRCLQVVRPVWAQNH 142
>AY507142-1|AAR92484.1| 395|Homo sapiens prostaglandin D2 receptor
protein.
Length = 395
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 301 HCWEISSAFCSGSGSDIFFSGLVFCIFLSSRKNQRCIILILPLFAICH 158
H WE+ + FC S F + LS+ RC+ ++ P++A H
Sbjct: 95 HSWELGTTFCKLHSSIFFLNMFASGFLLSAISLDRCLQVVRPVWAQNH 142
>AF144308-1|AAD34539.1| 395|Homo sapiens putative G protein-coupled
receptor protein.
Length = 395
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 301 HCWEISSAFCSGSGSDIFFSGLVFCIFLSSRKNQRCIILILPLFAICH 158
H WE+ + FC S F + LS+ RC+ ++ P++A H
Sbjct: 95 HSWELGTTFCKLHSSIFFLNMFASGFLLSAISLDRCLQVVRPVWAQNH 142
>AF118265-1|AAD21055.1| 502|Homo sapiens orphan G protein-coupled
receptor GPR44 protein.
Length = 502
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 301 HCWEISSAFCSGSGSDIFFSGLVFCIFLSSRKNQRCIILILPLFAICH 158
H WE+ + FC S F + LS+ RC+ ++ P++A H
Sbjct: 172 HSWELGTTFCKLHSSIFFLNMFASGFLLSAISLDRCLQVVRPVWAQNH 219
>AB008535-1|BAA74518.1| 395|Homo sapiens CRTH2 protein.
Length = 395
Score = 31.9 bits (69), Expect = 2.6
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 301 HCWEISSAFCSGSGSDIFFSGLVFCIFLSSRKNQRCIILILPLFAICH 158
H WE+ + FC S F + LS+ RC+ ++ P++A H
Sbjct: 95 HSWELGTTFCKLHSSIFFLNMFASGFLLSAISLDRCLQVVRPVWAQNH 142
>AK090619-1|BAC03489.1| 648|Homo sapiens protein ( Homo sapiens
cDNA FLJ33300 fis, clone BNGH42002168. ).
Length = 648
Score = 30.3 bits (65), Expect = 7.8
Identities = 25/93 (26%), Positives = 40/93 (43%)
Frame = +3
Query: 339 KEKVFVTGNTPELGEWDYTKIIMMDYDEASNLWLKTLTIPNTCEVLYRYAICFLNENSND 518
++ VF+ G E G+ ++ + Y A L TL + N ++L Y F+ N
Sbjct: 488 RDDVFLDGTGWEGGD-EWIRAQFAVYIHA--LLAATLQLDNE-KILSDYGTTFVTAWKNT 543
Query: 519 VFIRKWETNIHPRMIKQTMLHPTQDVFGEYDKK 617
R W +N HP + + HP Q + D K
Sbjct: 544 HNYRVWNSNKHPALAEINPNHPFQGQYSVSDMK 576
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,508,556
Number of Sequences: 237096
Number of extensions: 2160192
Number of successful extensions: 3373
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3373
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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