Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16k15f
         (776 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    26   0.45 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   4.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   5.5  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   7.3  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   9.7  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   9.7  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   9.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.7  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 25.8 bits (54), Expect = 0.45
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 557 DYRNSVIVARNPGSAKKATSYAERLRLAIAVIHGEQKEAE 676
           D RN  +VA+N  + +  T    + R++  ++HG   E E
Sbjct: 335 DRRNIEVVAKNKETLQAITGLKVKRRISFILVHGFPLEYE 374


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 491 DCPVDNLRASPFLLQYIQESIPDYRNSVIVAR 586
           D  +DNLR + +L   I ES+     +  +AR
Sbjct: 369 DLTIDNLRKAKYLRACITESLRLIPTTTCIAR 400


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +2

Query: 242 IIQTGTKDVNNNIMELLIMAYACKTSSASSIVGVIPYLPYSKQ 370
           +I  GTK +  N+      AY C+ SS   I   I  L   +Q
Sbjct: 452 LIGNGTKLIIKNVDYADTGAYMCQASSIGGITRDISSLVVQEQ 494


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -3

Query: 735 SIVRDLGIHGGEYRPSTSSLSASFCSPCMTAIASLN 628
           S++RD     GEYR ST  +  +        I+ LN
Sbjct: 396 SLLRDAFTSKGEYRMSTGEMKEAITQWQGNPISPLN 431


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +2

Query: 647 VIHGEQKEAESDEVDGRYSPPCIPRSRTMDV 739
           V +  + +  SD ++ +Y P    +S +MD+
Sbjct: 325 VNYASRSDMHSDNIEKKYPPSETEQSTSMDL 355


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +2

Query: 647 VIHGEQKEAESDEVDGRYSPPCIPRSRTMDV 739
           V +  + +  SD ++ +Y P    +S +MD+
Sbjct: 325 VNYASRSDMHSDNIEKKYPPSETEQSTSMDL 355


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 224 RGKNIYIIQTGTKDVNNNIMELLIMA 301
           RG+ I + +    DV  NIME  I++
Sbjct: 330 RGERIQLTEKNGIDVLGNIMEASILS 355



 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 683 EVDGRYSPPCIPRSRTMDVS 742
           EV  R+S   +PRSR+  +S
Sbjct: 668 EVTVRFSDTIVPRSRSGSIS 687


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 762  DVPGTPTDTSIV 727
            DVPG+P D  +V
Sbjct: 1212 DVPGSPADIKVV 1223


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 762  DVPGTPTDTSIV 727
            DVPG+P D  +V
Sbjct: 1208 DVPGSPADIKVV 1219


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,201
Number of Sequences: 438
Number of extensions: 5473
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)