Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16k07f
(777 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19158-6|CAA79575.2| 615|Caenorhabditis elegans Hypothetical pr... 120 1e-27
Z19156-3|CAA79564.2| 615|Caenorhabditis elegans Hypothetical pr... 120 1e-27
AF079899-1|AAC83661.1| 615|Caenorhabditis elegans sodium- and c... 120 1e-27
DQ482733-1|ABF20556.1| 600|Caenorhabditis elegans SNF-3 protein. 101 4e-22
DQ118731-1|AAZ23105.1| 600|Caenorhabditis elegans sodium-couple... 101 4e-22
AF026211-1|AAB71293.2| 600|Caenorhabditis elegans Sodium:neurot... 101 4e-22
Z74041-8|CAA98519.2| 610|Caenorhabditis elegans Hypothetical pr... 94 1e-19
DQ482732-1|ABF20555.1| 610|Caenorhabditis elegans SNF-11 protein. 94 1e-19
AY529124-1|AAT02634.1| 610|Caenorhabditis elegans GABA transpor... 94 1e-19
AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin reu... 93 2e-19
AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of... 93 2e-19
Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical pr... 90 1e-18
Z82264-8|CAB05153.1| 706|Caenorhabditis elegans Hypothetical pr... 86 2e-17
AY661556-1|AAV70493.1| 714|Caenorhabditis elegans acetylcholine... 85 4e-17
AF078786-4|AAC26944.4| 714|Caenorhabditis elegans Sodium:neurot... 85 4e-17
AY825249-1|AAX24101.1| 728|Caenorhabditis elegans sodium-couple... 85 5e-17
AL110485-24|CAB60372.4| 728|Caenorhabditis elegans Hypothetical... 85 5e-17
U41546-5|AAC48222.2| 1022|Caenorhabditis elegans Sodium:neurotra... 73 2e-13
Z82083-9|CAB04975.1| 635|Caenorhabditis elegans Hypothetical pr... 68 9e-12
Z81503-6|CAB04115.1| 635|Caenorhabditis elegans Hypothetical pr... 68 9e-12
AL110485-20|CAB60368.2| 600|Caenorhabditis elegans Hypothetical... 62 6e-10
AL132846-1|CAB60342.1| 102|Caenorhabditis elegans Hypothetical ... 60 2e-09
AL021474-5|CAA16307.2| 673|Caenorhabditis elegans Hypothetical ... 58 7e-09
AF039716-7|AAB96735.3| 617|Caenorhabditis elegans Sodium:neurot... 49 3e-06
AF077529-5|AAN60534.1| 756|Caenorhabditis elegans Hypothetical ... 41 0.001
AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical ... 41 0.001
Z73899-8|CAA98079.2| 669|Caenorhabditis elegans Hypothetical pr... 34 0.099
U23528-2|AAK31387.1| 984|Caenorhabditis elegans Calsyntenin/alc... 30 1.6
AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin p... 30 1.6
Z82274-5|CAB05227.1| 333|Caenorhabditis elegans Hypothetical pr... 29 4.9
AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 29 4.9
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 28 6.5
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 28 6.5
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 28 6.5
AL034393-13|CAA22317.1| 340|Caenorhabditis elegans Hypothetical... 28 6.5
U53332-5|AAK31535.2| 821|Caenorhabditis elegans Related to yeas... 28 8.6
DQ178636-1|ABD75715.1| 826|Caenorhabditis elegans vacuolar prot... 28 8.6
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 28 8.6
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 28 8.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.6
>Z19158-6|CAA79575.2| 615|Caenorhabditis elegans Hypothetical
protein T23G5.5 protein.
Length = 615
Score = 120 bits (289), Expect = 1e-27
Identities = 56/155 (36%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Frame = +3
Query: 207 TQDVTPDRAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXXXXXXXXXXXX 386
T+ P R +W L+F+L+ +G+AV LGN+WRFPYL +KNGGG
Sbjct: 33 TEPKDPAREQWSGKLDFLLSVVGFAVDLGNIWRFPYLCFKNGGGVFLIPYSIMVLLTGVP 92
Query: 387 XXYLELYIGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXAWTLFYTIVSI 566
Y+EL +GQY G + + I P F G+GYC + AW L Y S
Sbjct: 93 LFYMELCLGQYYRKGAITTWGRICPLFKGIGYCVILTAFYVDFFYNVILAWGLHYLYTSF 152
Query: 567 GGNLGWGSCDNDYNTDFCYSGEYDR----VCRENN 659
NL W SC+N YN+ CY + +CR N
Sbjct: 153 SFNLPWASCNNSYNSPACYEPHWSEDGTAMCRSAN 187
>Z19156-3|CAA79564.2| 615|Caenorhabditis elegans Hypothetical
protein T23G5.5 protein.
Length = 615
Score = 120 bits (289), Expect = 1e-27
Identities = 56/155 (36%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Frame = +3
Query: 207 TQDVTPDRAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXXXXXXXXXXXX 386
T+ P R +W L+F+L+ +G+AV LGN+WRFPYL +KNGGG
Sbjct: 33 TEPKDPAREQWSGKLDFLLSVVGFAVDLGNIWRFPYLCFKNGGGVFLIPYSIMVLLTGVP 92
Query: 387 XXYLELYIGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXAWTLFYTIVSI 566
Y+EL +GQY G + + I P F G+GYC + AW L Y S
Sbjct: 93 LFYMELCLGQYYRKGAITTWGRICPLFKGIGYCVILTAFYVDFFYNVILAWGLHYLYTSF 152
Query: 567 GGNLGWGSCDNDYNTDFCYSGEYDR----VCRENN 659
NL W SC+N YN+ CY + +CR N
Sbjct: 153 SFNLPWASCNNSYNSPACYEPHWSEDGTAMCRSAN 187
>AF079899-1|AAC83661.1| 615|Caenorhabditis elegans sodium- and
chloride-dependentantidepressant- and cocaine-sensitive
dopamine transporterprotein.
Length = 615
Score = 120 bits (289), Expect = 1e-27
Identities = 56/155 (36%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Frame = +3
Query: 207 TQDVTPDRAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXXXXXXXXXXXX 386
T+ P R +W L+F+L+ +G+AV LGN+WRFPYL +KNGGG
Sbjct: 33 TEPKDPAREQWSGKLDFLLSVVGFAVDLGNIWRFPYLCFKNGGGVFLIPYSIMVLLTGVP 92
Query: 387 XXYLELYIGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXAWTLFYTIVSI 566
Y+EL +GQY G + + I P F G+GYC + AW L Y S
Sbjct: 93 LFYMELCLGQYYRKGAITTWGRICPLFKGIGYCVILTAFYVDFFYNVILAWGLHYLYTSF 152
Query: 567 GGNLGWGSCDNDYNTDFCYSGEYDR----VCRENN 659
NL W SC+N YN+ CY + +CR N
Sbjct: 153 SFNLPWASCNNSYNSPACYEPHWSEDGTAMCRSAN 187
>DQ482733-1|ABF20556.1| 600|Caenorhabditis elegans SNF-3 protein.
Length = 600
Score = 101 bits (243), Expect = 4e-22
Identities = 48/152 (31%), Positives = 75/152 (49%)
Frame = +3
Query: 177 DANGRATQKTTQDVTPDRAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXX 356
+A + +++ PDR +W +F+++ + YAVGLGNVWRFPYL YKNGGG+
Sbjct: 13 EAKAKELEQSQHSEEPDRGQWTGKFDFLMSMVAYAVGLGNVWRFPYLCYKNGGGSFLVVY 72
Query: 357 XXXXXXXXXXXXYLELYIGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXA 536
+E+ +GQY G ++ + + P F G+G + A
Sbjct: 73 MIFFCLAAVPIFLMEVTVGQYLQKGAMEMW-LMCPLFRGVGIGNVVIAFMCIAYFCVIVA 131
Query: 537 WTLFYTIVSIGGNLGWGSCDNDYNTDFCYSGE 632
W +FY I SI W +C+N +N C +G+
Sbjct: 132 WAMFYMISSIAWVFPWETCNNYWNDATCVTGK 163
>DQ118731-1|AAZ23105.1| 600|Caenorhabditis elegans sodium-coupled
betaine transporterprotein protein.
Length = 600
Score = 101 bits (243), Expect = 4e-22
Identities = 48/152 (31%), Positives = 75/152 (49%)
Frame = +3
Query: 177 DANGRATQKTTQDVTPDRAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXX 356
+A + +++ PDR +W +F+++ + YAVGLGNVWRFPYL YKNGGG+
Sbjct: 13 EAKAKELEQSQHSEEPDRGQWTGKFDFLMSMVAYAVGLGNVWRFPYLCYKNGGGSFLVVY 72
Query: 357 XXXXXXXXXXXXYLELYIGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXA 536
+E+ +GQY G ++ + + P F G+G + A
Sbjct: 73 MIFFCLAAVPIFLMEVTVGQYLQKGAMEMW-LMCPLFRGVGIGNVVIAFMCIAYFCVIVA 131
Query: 537 WTLFYTIVSIGGNLGWGSCDNDYNTDFCYSGE 632
W +FY I SI W +C+N +N C +G+
Sbjct: 132 WAMFYMISSIAWVFPWETCNNYWNDATCVTGK 163
>AF026211-1|AAB71293.2| 600|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 3
protein.
Length = 600
Score = 101 bits (243), Expect = 4e-22
Identities = 48/152 (31%), Positives = 75/152 (49%)
Frame = +3
Query: 177 DANGRATQKTTQDVTPDRAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXX 356
+A + +++ PDR +W +F+++ + YAVGLGNVWRFPYL YKNGGG+
Sbjct: 13 EAKAKELEQSQHSEEPDRGQWTGKFDFLMSMVAYAVGLGNVWRFPYLCYKNGGGSFLVVY 72
Query: 357 XXXXXXXXXXXXYLELYIGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXA 536
+E+ +GQY G ++ + + P F G+G + A
Sbjct: 73 MIFFCLAAVPIFLMEVTVGQYLQKGAMEMW-LMCPLFRGVGIGNVVIAFMCIAYFCVIVA 131
Query: 537 WTLFYTIVSIGGNLGWGSCDNDYNTDFCYSGE 632
W +FY I SI W +C+N +N C +G+
Sbjct: 132 WAMFYMISSIAWVFPWETCNNYWNDATCVTGK 163
>Z74041-8|CAA98519.2| 610|Caenorhabditis elegans Hypothetical
protein T03F7.1 protein.
Length = 610
Score = 93.9 bits (223), Expect = 1e-19
Identities = 52/148 (35%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Frame = +3
Query: 225 DRAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXXXXXXXXXXXXXXYLEL 404
+R +W +FI++C+GYA+GLGNVWRFPYL Y+NGGGA LE
Sbjct: 9 EREQWSSWADFIMSCIGYAIGLGNVWRFPYLCYQNGGGAFLIPYCISLVFCGAPLFILET 68
Query: 405 YIGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXAWTLFYTIVSIG-GNLG 581
GQ +G L F I P F G+G +W Y S ++
Sbjct: 69 SWGQLMSVGGLGMFK-ICPIFKGVGIAAAVMAFWLNIYYIVVLSWAATYLYNSFTMSDVP 127
Query: 582 WGSCDNDYNTDFCYSGEYDRV-CRENNT 662
W +CD+ +NT C S EY ++ C N T
Sbjct: 128 WKNCDHAWNTPNCRS-EYVKIPCDSNRT 154
>DQ482732-1|ABF20555.1| 610|Caenorhabditis elegans SNF-11 protein.
Length = 610
Score = 93.9 bits (223), Expect = 1e-19
Identities = 52/148 (35%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Frame = +3
Query: 225 DRAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXXXXXXXXXXXXXXYLEL 404
+R +W +FI++C+GYA+GLGNVWRFPYL Y+NGGGA LE
Sbjct: 9 EREQWSSWADFIMSCIGYAIGLGNVWRFPYLCYQNGGGAFLIPYCISLVFCGAPLFILET 68
Query: 405 YIGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXAWTLFYTIVSIG-GNLG 581
GQ +G L F I P F G+G +W Y S ++
Sbjct: 69 SWGQLMSVGGLGMFK-ICPIFKGVGIAAAVMAFWLNIYYIVVLSWAATYLYNSFTMSDVP 127
Query: 582 WGSCDNDYNTDFCYSGEYDRV-CRENNT 662
W +CD+ +NT C S EY ++ C N T
Sbjct: 128 WKNCDHAWNTPNCRS-EYVKIPCDSNRT 154
>AY529124-1|AAT02634.1| 610|Caenorhabditis elegans GABA transporter
protein protein.
Length = 610
Score = 93.9 bits (223), Expect = 1e-19
Identities = 52/148 (35%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Frame = +3
Query: 225 DRAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXXXXXXXXXXXXXXYLEL 404
+R +W +FI++C+GYA+GLGNVWRFPYL Y+NGGGA LE
Sbjct: 9 EREQWSSWADFIMSCIGYAIGLGNVWRFPYLCYQNGGGAFLIPYCISLVFCGAPLFILET 68
Query: 405 YIGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXAWTLFYTIVSIG-GNLG 581
GQ +G L F I P F G+G +W Y S ++
Sbjct: 69 SWGQLMSVGGLGMFK-ICPIFKGVGIAAAVMAFWLNIYYIVVLSWAATYLYNSFTMSDVP 127
Query: 582 WGSCDNDYNTDFCYSGEYDRV-CRENNT 662
W +CD+ +NT C S EY ++ C N T
Sbjct: 128 WKNCDHAWNTPNCRS-EYVKIPCDSNRT 154
>AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin
reuptake transporter protein.
Length = 671
Score = 93.1 bits (221), Expect = 2e-19
Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Frame = +3
Query: 228 RAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXXXXXXXXXXXXXXYLELY 407
R KW +EF+LA +GYAV LGN+WRFP + YK+GGGA Y+EL
Sbjct: 100 RDKWATKMEFLLAVVGYAVDLGNIWRFPSVCYKHGGGAFLIPYFIMLMIGGLPMFYMELV 159
Query: 408 IGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXAWTLFYTIVSIG----GN 575
+GQ+ G + + + P F G+GY A +++ IVS+
Sbjct: 160 LGQFHRSGCVSIWRKVCPLFRGIGYGICCICTFIAIFYNAIIAQAVYFAIVSLSKIWDSE 219
Query: 576 LGWGSCDNDYNTDFCYSGEYDRVCRENNTENYTDLTFFMRQCMSIGEICERSGFEPL 746
+ W SC N +NT C S + + N T T + + E+ + +GF+ L
Sbjct: 220 VPWASCGNPWNTPRC-SDDLNVTISRNGTPLTTPSEEY--YLYKVLEVQKSTGFDDL 273
>AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 5 protein.
Length = 671
Score = 93.1 bits (221), Expect = 2e-19
Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Frame = +3
Query: 228 RAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXXXXXXXXXXXXXXYLELY 407
R KW +EF+LA +GYAV LGN+WRFP + YK+GGGA Y+EL
Sbjct: 100 RDKWATKMEFLLAVVGYAVDLGNIWRFPSVCYKHGGGAFLIPYFIMLMIGGLPMFYMELV 159
Query: 408 IGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXAWTLFYTIVSIG----GN 575
+GQ+ G + + + P F G+GY A +++ IVS+
Sbjct: 160 LGQFHRSGCVSIWRKVCPLFRGIGYGICCICTFIAIFYNAIIAQAVYFAIVSLSKIWDSE 219
Query: 576 LGWGSCDNDYNTDFCYSGEYDRVCRENNTENYTDLTFFMRQCMSIGEICERSGFEPL 746
+ W SC N +NT C S + + N T T + + E+ + +GF+ L
Sbjct: 220 VPWASCGNPWNTPRC-SDDLNVTISRNGTPLTTPSEEY--YLYKVLEVQKSTGFDDL 273
>Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical
protein F55H12.1 protein.
Length = 768
Score = 90.2 bits (214), Expect = 1e-18
Identities = 52/183 (28%), Positives = 80/183 (43%)
Frame = +3
Query: 126 VGFIIAMASGDYTMNKGDANGRATQKTTQDVTPDRAKWGRPLEFILACLGYAVGLGNVWR 305
V F+ + + + G A +A + Q DR + R +E +L+ LG A+GLGN+WR
Sbjct: 75 VSFLDSEVTAKEYVKDGGAARKAYRDAIQVENTDRQAF-RGIESLLSSLGQAIGLGNIWR 133
Query: 306 FPYLSYKNGGGAXXXXXXXXXXXXXXXXXYLELYIGQYTGLGPLKAFSAISPFFSGLGYC 485
FP ++Y+NGG + ++E +GQY P F I P G+G+
Sbjct: 134 FPTVAYQNGGTSFLIVYIICAFVFAVPAIHMEFALGQYAAKSPPAVFRRIMPALEGVGWM 193
Query: 486 TLXXXXXXXXXXXXXXAWTLFYTIVSIGGNLGWGSCDNDYNTDFCYSGEYDRVCRENNTE 665
T +W + Y I++I G CDN +N + CY G C +
Sbjct: 194 TCIVGAVIGVYYMILISWIVLY-IINIFYVNNMGRCDNPWNQNNCYDGSEQSRCNKGLYS 252
Query: 666 NYT 674
N T
Sbjct: 253 NMT 255
>Z82264-8|CAB05153.1| 706|Caenorhabditis elegans Hypothetical
protein C49C3.1 protein.
Length = 706
Score = 86.2 bits (204), Expect = 2e-17
Identities = 48/167 (28%), Positives = 68/167 (40%), Gaps = 3/167 (1%)
Frame = +3
Query: 183 NGRATQKTTQDVTPDRAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXXXX 362
+G + + P R WG +EF+L+ LG AVGLGN+WRFP +Y NGG A
Sbjct: 29 SGSSKEIEESQADPCRGAWGNQIEFLLSTLGMAVGLGNIWRFPTRAYNNGGSAFLVPYVA 88
Query: 363 XXXXXXXXXXYLELYIGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXAW- 539
YLE +GQY F +P G+G+ + W
Sbjct: 89 CALLFGLPAVYLEFLLGQYHRTTAPIIFRRFAPILQGVGWMAVAVSSLVAIYYIIIIGWS 148
Query: 540 TLFYTIVSIGGNLGWGSCDNDY-NTDFCYSGEYDRVCRE-NNTENYT 674
T++ + +G W C N + N + C +C N T N T
Sbjct: 149 TVYMASIVMGHTSKWNRCGNSWNNAESCVDSGLQPLCASFNATGNET 195
>AY661556-1|AAV70493.1| 714|Caenorhabditis elegans
acetylcholine/choline transporter protein.
Length = 714
Score = 85.4 bits (202), Expect = 4e-17
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Frame = +3
Query: 156 DYTMNKGDANGRATQKT-TQDVTPDRAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNG 332
DYT +GD + T D R W +++LA +G+ G+G+ W+FP+L +++G
Sbjct: 40 DYT-REGDIEYPFEEITGVGDENRIRGNWSNKSDYLLAVIGFTAGVGSFWKFPFLVFQHG 98
Query: 333 GGAXXXXXXXXXXXXXXXXXYLELYIGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXX 512
G A ++E+ +GQ++ + + + P F G+G+ +
Sbjct: 99 GAAFLVPYLCMLCLASLPMFFMEMVLGQFSSSAAISVWKVV-PLFKGIGFAQVTISGFFA 157
Query: 513 XXXXXXXAWTLFYTIVSIGGNLGWGSCDNDYNTDFCYSGEYDRVCRENN 659
AWTLFY I S ++ W +C N ++ + C G + C+E N
Sbjct: 158 VFFNIISAWTLFYLINSFSFSIPWSNCANSWSGENCTLGTRIQ-CKEMN 205
>AF078786-4|AAC26944.4| 714|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 6
protein.
Length = 714
Score = 85.4 bits (202), Expect = 4e-17
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Frame = +3
Query: 156 DYTMNKGDANGRATQKT-TQDVTPDRAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNG 332
DYT +GD + T D R W +++LA +G+ G+G+ W+FP+L +++G
Sbjct: 40 DYT-REGDIEYPFEEITGVGDENRIRGNWSNKSDYLLAVIGFTAGVGSFWKFPFLVFQHG 98
Query: 333 GGAXXXXXXXXXXXXXXXXXYLELYIGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXX 512
G A ++E+ +GQ++ + + + P F G+G+ +
Sbjct: 99 GAAFLVPYLCMLCLASLPMFFMEMVLGQFSSSAAISVWKVV-PLFKGIGFAQVTISGFFA 157
Query: 513 XXXXXXXAWTLFYTIVSIGGNLGWGSCDNDYNTDFCYSGEYDRVCRENN 659
AWTLFY I S ++ W +C N ++ + C G + C+E N
Sbjct: 158 VFFNIISAWTLFYLINSFSFSIPWSNCANSWSGENCTLGTRIQ-CKEMN 205
>AY825249-1|AAX24101.1| 728|Caenorhabditis elegans sodium-coupled
neutral amino acidtransporter protein.
Length = 728
Score = 85.0 bits (201), Expect = 5e-17
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 6/171 (3%)
Frame = +3
Query: 195 TQKTTQDVTPD-----RAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXXX 359
T + T D P+ R +G EF+L LG AVGLGN+WRFP +Y NGG A
Sbjct: 66 TTRPTLDTPPEEEEEKRDGFGNSFEFVLTSLGLAVGLGNIWRFPTRAYNNGGSAFLIPYL 125
Query: 360 XXXXXXXXXXXYLELYIGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXAW 539
Y E GQY G P F + P G+G+ + +W
Sbjct: 126 TCAFLFGLPAVYFEFLTGQYQGKSPPVIFRRVRPILEGVGWMGVFVAALVAIYYIVIVSW 185
Query: 540 TLFYTIVSIGGNLG-WGSCDNDYNTDFCYSGEYDRVCRENNTENYTDLTFF 689
Y I G+ W C+ND+N D+ +N+T+ + T +
Sbjct: 186 ISIYMINICRGHFALWSHCNNDWNNGTSCITMADQYLCKNHTKVMANSTLW 236
>AL110485-24|CAB60372.4| 728|Caenorhabditis elegans Hypothetical
protein Y46G5A.30 protein.
Length = 728
Score = 85.0 bits (201), Expect = 5e-17
Identities = 50/171 (29%), Positives = 70/171 (40%), Gaps = 6/171 (3%)
Frame = +3
Query: 195 TQKTTQDVTPD-----RAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXXX 359
T + T D P+ R +G EF+L LG AVGLGN+WRFP +Y NGG A
Sbjct: 66 TTRPTLDTPPEEEEEKRDGFGNSFEFVLTSLGLAVGLGNIWRFPTRAYNNGGSAFLIPYL 125
Query: 360 XXXXXXXXXXXYLELYIGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXAW 539
Y E GQY G P F + P G+G+ + +W
Sbjct: 126 TCAFLFGLPAVYFEFLTGQYQGKSPPVIFRRVRPILEGVGWMGVFVAALVAIYYIVIVSW 185
Query: 540 TLFYTIVSIGGNLG-WGSCDNDYNTDFCYSGEYDRVCRENNTENYTDLTFF 689
Y I G+ W C+ND+N D+ +N+T+ + T +
Sbjct: 186 ISIYMINICRGHFALWSHCNNDWNNGTSCITMADQYLCKNHTKVMANSTLW 236
>U41546-5|AAC48222.2| 1022|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 12
protein.
Length = 1022
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 5/134 (3%)
Frame = +3
Query: 228 RAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXXXXXXXXXXXXXXYLELY 407
R W +F L+CLG+ VG+G+ RFP Y++GGG +L L
Sbjct: 157 RELWRTQKDFFLSCLGFMVGVGHTMRFPAKVYQHGGGVFFIPYLFSLIFFGLPLVFLHLS 216
Query: 408 IGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXAWTLFYTIVS-----IGG 572
+GQYTG AF + P SG+G+ + AW + Y S +G
Sbjct: 217 LGQYTGQAANTAFQRLMPIGSGVGWALVVIAIPVAVYYNIIVAWAIHYFFQSAKGLLLGD 276
Query: 573 NLGWGSCDNDYNTD 614
L W +C +++ D
Sbjct: 277 ELPWETCRDEWQLD 290
>Z82083-9|CAB04975.1| 635|Caenorhabditis elegans Hypothetical
protein ZK1010.9 protein.
Length = 635
Score = 67.7 bits (158), Expect = 9e-12
Identities = 37/123 (30%), Positives = 52/123 (42%)
Frame = +3
Query: 183 NGRATQKTTQDVTPDRAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXXXX 362
NGR + V + R +E L+ LG AVGLGN+WRFP +YKNGG +
Sbjct: 50 NGRRAYRNQVVVENVDRQAFRGIESFLSSLGQAVGLGNIWRFPTTAYKNGGLSFLIAYVV 109
Query: 363 XXXXXXXXXXYLELYIGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXAWT 542
++E +GQY P AF + P G+G+ T +W
Sbjct: 110 CGILFAVPAIHMEFALGQYAAKSPPAAFRRMMPILEGVGWMTCLVGAIIGVYYMIVISWI 169
Query: 543 LFY 551
+ Y
Sbjct: 170 VLY 172
>Z81503-6|CAB04115.1| 635|Caenorhabditis elegans Hypothetical
protein ZK1010.9 protein.
Length = 635
Score = 67.7 bits (158), Expect = 9e-12
Identities = 37/123 (30%), Positives = 52/123 (42%)
Frame = +3
Query: 183 NGRATQKTTQDVTPDRAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXXXX 362
NGR + V + R +E L+ LG AVGLGN+WRFP +YKNGG +
Sbjct: 50 NGRRAYRNQVVVENVDRQAFRGIESFLSSLGQAVGLGNIWRFPTTAYKNGGLSFLIAYVV 109
Query: 363 XXXXXXXXXXYLELYIGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXAWT 542
++E +GQY P AF + P G+G+ T +W
Sbjct: 110 CGILFAVPAIHMEFALGQYAAKSPPAAFRRMMPILEGVGWMTCLVGAIIGVYYMIVISWI 169
Query: 543 LFY 551
+ Y
Sbjct: 170 VLY 172
>AL110485-20|CAB60368.2| 600|Caenorhabditis elegans Hypothetical
protein Y46G5A.25 protein.
Length = 600
Score = 61.7 bits (143), Expect = 6e-10
Identities = 28/72 (38%), Positives = 35/72 (48%)
Frame = +3
Query: 267 CLGYAVGLGNVWRFPYLSYKNGGGAXXXXXXXXXXXXXXXXXYLELYIGQYTGLGPLKAF 446
CLG +VGLGN+WRFP +Y+NGG YLE +GQY G P +
Sbjct: 110 CLGMSVGLGNIWRFPSRAYENGGSVFLIPYITCALLFGLPGVYLEFAMGQYQGRSPPFVY 169
Query: 447 SAISPFFSGLGY 482
I P G G+
Sbjct: 170 RRIMPALEGFGW 181
>AL132846-1|CAB60342.1| 102|Caenorhabditis elegans Hypothetical
protein Y43D4A.1 protein.
Length = 102
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = +3
Query: 183 NGRATQKTTQDVTPDRAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGG 335
+G + + P R WG +EF+L+ LG AVGLGN+WRFP +Y NGG
Sbjct: 29 SGSSKEIEESQADPCRGAWGNQIEFLLSTLGMAVGLGNIWRFPTRAYNNGG 79
>AL021474-5|CAA16307.2| 673|Caenorhabditis elegans Hypothetical
protein Y32F6A.2 protein.
Length = 673
Score = 58.0 bits (134), Expect = 7e-09
Identities = 40/148 (27%), Positives = 54/148 (36%), Gaps = 3/148 (2%)
Frame = +3
Query: 213 DVTPDRAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXXXXXXXXXXXXXX 392
D + W E I A L + GN+W FPYL GG
Sbjct: 72 DTKMEGPTWTSKWEAITATLSFVTCSGNIWFFPYLCGYYGGW-FPYQFTFCYVFIAVPLL 130
Query: 393 YLELYIGQYTGLGPLKAFSAISPFFSGL--GYCTLXXXXXXXXXXXXXXAWTLF-YTIVS 563
YLE +GQY PL FS ++P +GL G C + T+F + S
Sbjct: 131 YLETALGQYASASPLSVFSRMAPAMAGLSAGMCFIMVFRTISLSVWAIYDLTIFTHASQS 190
Query: 564 IGGNLGWGSCDNDYNTDFCYSGEYDRVC 647
I W SC + D+C + + C
Sbjct: 191 IWSTSPWESCQESQSGDYCVNYKLSSKC 218
>AF039716-7|AAB96735.3| 617|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 1
protein.
Length = 617
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/84 (30%), Positives = 37/84 (44%)
Frame = +3
Query: 228 RAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXXXXXXXXXXXXXXYLELY 407
R W +EFI++ + Y + N P L +NGG A +E+
Sbjct: 21 RDLWPSKIEFIVSAMAYLFAMTNFLNLPKLILENGGVAFAAAYAIVVGVLCMPTMVMEMS 80
Query: 408 IGQYTGLGPLKAFSAISPFFSGLG 479
IGQ TG P+ AF + P F G+G
Sbjct: 81 IGQVTGRAPVLAFYHLFPVFRGIG 104
>AF077529-5|AAN60534.1| 756|Caenorhabditis elegans Hypothetical
protein C09E8.1b protein.
Length = 756
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Frame = +3
Query: 396 LELYIGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXAWTLFYTIVSIGGN 575
L + +G + + F ++P +G+G+ + + Y + SI
Sbjct: 45 LMMIVGHLSKSAAVSTFRKLAPISAGIGWALTWHVAEKLYAESLRASQYVLYILFSIRPY 104
Query: 576 LGWG-SCDNDYNTDFCYSGEYDRVCRENNTENYTD 677
L W SCD+ YNT++C+ + + +Y D
Sbjct: 105 LSWAVSCDHTYNTEYCHDFDDSNITVTEGKHHYPD 139
>AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical
protein C09E8.1a protein.
Length = 783
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
Frame = +3
Query: 396 LELYIGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXAWTLFYTIVSIGGN 575
L + +G + + F ++P +G+G+ + + Y + SI
Sbjct: 45 LMMIVGHLSKSAAVSTFRKLAPISAGIGWALTWHVAEKLYAESLRASQYVLYILFSIRPY 104
Query: 576 LGWG-SCDNDYNTDFCYSGEYDRVCRENNTENYTD 677
L W SCD+ YNT++C+ + + +Y D
Sbjct: 105 LSWAVSCDHTYNTEYCHDFDDSNITVTEGKHHYPD 139
>Z73899-8|CAA98079.2| 669|Caenorhabditis elegans Hypothetical
protein ZK829.10 protein.
Length = 669
Score = 34.3 bits (75), Expect = 0.099
Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 4/143 (2%)
Frame = +3
Query: 198 QKTTQDVTPDRAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGGGAXXXXXXXXXXXX 377
++ +D P R ++ + + + + +GL N F ++ GGA
Sbjct: 5 KEVRKDALP-RPEFKSWYDLLFSVVNLCIGLSNFLIFLAKVHEYRGGAFILAYGLILIML 63
Query: 378 XXXXXYLELYIGQYTGLGPLKAFSAISPFFSGLGYCTLXXXXXXXXXXXXXXAWTLFYTI 557
YLEL IGQ+ P +P G G+ L A F +
Sbjct: 64 GYPVLYLELIIGQFHRCSPWIFIRRCAPILQGFGFMALVSAVTILYPYQYSVA-RAFKFL 122
Query: 558 VSI----GGNLGWGSCDNDYNTD 614
+S+ ++ W +C N +NT+
Sbjct: 123 LSLARYRSQDMPWSTCGNWWNTE 145
>U23528-2|AAK31387.1| 984|Caenorhabditis elegans
Calsyntenin/alcadein homolog protein1, isoform a
protein.
Length = 984
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 488 FGRNQHHFNLLYDHCGLDVVL 550
F N+HHF++ HC L+VVL
Sbjct: 392 FNMNRHHFSVYIRHCKLEVVL 412
>AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin
protein.
Length = 984
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 488 FGRNQHHFNLLYDHCGLDVVL 550
F N+HHF++ HC L+VVL
Sbjct: 392 FNMNRHHFSVYIRHCKLEVVL 412
>Z82274-5|CAB05227.1| 333|Caenorhabditis elegans Hypothetical
protein JC8.7 protein.
Length = 333
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 188 AICVSLIHSVISTSHCNNKTNELRRLNKLLGNM*TIHICSE 66
A C+++ H V S C K E + L+ + G M I+IC++
Sbjct: 233 AYCINIEHLVRSLRLCQTKEQEEKVLDFVYGLMNEINICND 273
>AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical
protein Y45F3A.8 protein.
Length = 404
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 627 GEYDRVCR-ENNTENYTDLTFFMRQCMSIGEICERSGFEPLDDKYC 761
G D V R E TE+ D+T C + ++CE S ++ L + YC
Sbjct: 314 GRCDEVERVEEGTEDCEDMT---PDCRNYRDLCEHSRYKTLMENYC 356
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin receptor
protein 2 protein.
Length = 1338
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 225 DRAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGG 335
DR KWGR + ++ LG W F +L+ GG
Sbjct: 1073 DRTKWGRIIGWLKGSATLLCLLGITWIFGFLTAVKGG 1109
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -2
Query: 689 KKCQVRVVLCVVLTTYPIVFSAVTKISIVVIITRSPAQVSSNRNNRV 549
K C++ V+ TT P+V S + II SP V S NN V
Sbjct: 2786 KDCRLLFNSDVINTTIPVVTSPANSTWNLRIINESPETVKSLENNAV 2832
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 225 DRAKWGRPLEFILACLGYAVGLGNVWRFPYLSYKNGG 335
DR KWGR + ++ LG W F +L+ GG
Sbjct: 1073 DRTKWGRIIGWLKGSATLLCLLGITWIFGFLTAVKGG 1109
>AL034393-13|CAA22317.1| 340|Caenorhabditis elegans Hypothetical
protein Y18D10A.17 protein.
Length = 340
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 567 GGNLGWGSCDNDYNTDFCYSGEYDRVCRENN 659
GGN G+G +N Y + G Y+ R+NN
Sbjct: 287 GGNRGYGGYNNGYQHQHQHRGGYNGGYRQNN 317
>U53332-5|AAK31535.2| 821|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 35 protein.
Length = 821
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = -2
Query: 584 PAQVSSNRNNRVEQRPGHNDHIVN*NDADYDQSAVAEPTEEWRDRTECL*RTQSRVLPYV 405
P ++ N ++ P ++H V S + + + RDR CL T +L
Sbjct: 598 PMKLYLNGAITADRVPFEDNHTVVYEFVSKALSILEDDVVDSRDRVRCLHLTVGTLLKTT 657
Query: 404 QLQVEDWQTDENQ 366
L E+WQ NQ
Sbjct: 658 HLPEENWQPLANQ 670
>DQ178636-1|ABD75715.1| 826|Caenorhabditis elegans vacuolar protein
sorting factor protein.
Length = 826
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = -2
Query: 584 PAQVSSNRNNRVEQRPGHNDHIVN*NDADYDQSAVAEPTEEWRDRTECL*RTQSRVLPYV 405
P ++ N ++ P ++H V S + + + RDR CL T +L
Sbjct: 603 PMKLYLNGAITADRVPFEDNHTVVYEFVSKALSILEDDVVDSRDRVRCLHLTVGTLLKTT 662
Query: 404 QLQVEDWQTDENQ 366
L E+WQ NQ
Sbjct: 663 HLPEENWQPLANQ 675
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 762 NNICHQEAQTQTSHKFHRCSCTVS*KMS 679
N C E + ++ +F+RC C V K+S
Sbjct: 218 NGGCEHECENDSNGEFYRCRCRVGFKLS 245
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 762 NNICHQEAQTQTSHKFHRCSCTVS*KMS 679
N C E + ++ +F+RC C V K+S
Sbjct: 218 NGGCEHECENDSNGEFYRCRCRVGFKLS 245
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.9 bits (59), Expect = 8.6
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -2
Query: 383 QTDENQHQEKWKKESTSAV 327
QT EN+ +E WKK+S +++
Sbjct: 921 QTQENEEKETWKKDSRASI 939
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,808,231
Number of Sequences: 27780
Number of extensions: 467275
Number of successful extensions: 1366
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1336
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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