Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16j24f
         (711 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    30   1.4  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z83236-8|CAE17881.1|  321|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical...    28   5.7  
Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
 Frame = +2

Query: 245 IIHHEWVLTAAHCLA---NRINFVVRLGLTNLTRPDYLVETTHKFIHPRYIEILGGVQTD 415
           +I   +VLTAAHC A      ++ VR+G  + +        T   IHP Y   +G   + 
Sbjct: 88  LIDPNFVLTAAHCFAKDRRPTSYSVRVG-GHRSGSGSPHRVTAVSIHPWY--NIGFPSSY 144

Query: 416 DIALVKLNHHIPYSRYIQPCRLQNSEQKNINYEGAIFTVSGYGRTDDPWNGGVASEILLW 595
           D A+++++  +  S   +P  L +        E  +  V+G+G T +     +++  L  
Sbjct: 145 DFAIMRIHPPVNTSTTARPICLPSLPA----VENRLCVVTGWGSTIE--GSSLSAPTLRE 198

Query: 596 VHLRGITNEQCLTHYPN--SRVIQKQTLCAAY 685
           +H+  ++   C +  PN   R+     LCA Y
Sbjct: 199 IHVPLLSTLFC-SSLPNYIGRIHLPSMLCAGY 229


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +3

Query: 111  SKISETRTANLAS*PVGLQKTLRSRIRSAF-VWSAPSGESAPAAVQSFTTNGS*LRPTAS 287
            S ISE+ TA  AS   G   T+ S   S     SA SG+   +  Q  +   + +  TAS
Sbjct: 1698 STISESSTAASASSQTGSTVTMGSSSTSGVSTSSASSGQPQMSTSQGSSAGSTVVSSTAS 1757

Query: 288  PIASTS 305
            P AS++
Sbjct: 1758 PAASST 1763


>Z83236-8|CAE17881.1|  321|Caenorhabditis elegans Hypothetical
           protein K10H10.10 protein.
          Length = 321

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +1

Query: 517 CNLHRERLRTYR*SMERWRGVRNPVVGASAWYHQRAVSDPLPEQP 651
           C  HRER R       R++      V     Y +R  ++PLP +P
Sbjct: 214 CKKHRERFRYVCPDPLRFQSFAENAVDFCVRYQERCPNEPLPAEP 258


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical protein
            R04E5.8a protein.
          Length = 997

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 21/76 (27%), Positives = 25/76 (32%)
 Frame = +1

Query: 109  HRRSPKHGPPISHRSRLACRRRSDPASDQPSYGQPRRGSQLLRRFNHSPRMGPDCGPLPR 288
            H R   HGPP +H       R  D    Q             RR NH        G   +
Sbjct: 914  HNRGHHHGPPRNHNQDRNRHRNHDGNRHQNQDRSRHHNQDRNRRQNHDRNRHQSQGRNRQ 973

Query: 289  QSHQLRGAFGLDEPDP 336
            Q H+ RG    +E  P
Sbjct: 974  QDHE-RGDEAHEEARP 988


>AC006708-10|AAF60430.2| 1250|Caenorhabditis elegans Hypothetical
           protein Y110A7A.16 protein.
          Length = 1250

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
 Frame = +2

Query: 482 QNSEQKNINY--EGAIFTVSGYGRTDDPWNGGVAS---EILLWVHLRGITNEQCLTHYPN 646
           Q+S + ++++  +G I  VS Y   +D  N  V     EIL  +++R I    C  H PN
Sbjct: 185 QHSRKTSVHWRWDGEIVAVSFYSSQNDTRNLTVFDRNGEILNNMNIRNIYLSHCFAHKPN 244

Query: 647 SRVI 658
           + ++
Sbjct: 245 ANLL 248


>Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical
           protein R11A8.6 protein.
          Length = 1141

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -1

Query: 327 FVKPKRTTKLMRLARQWAAVRTHSW 253
           FVK KR    +R AR WA  R   W
Sbjct: 440 FVKEKRFANWLRDARDWAVSRNRFW 464


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,550,669
Number of Sequences: 27780
Number of extensions: 351527
Number of successful extensions: 958
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)