Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16j14f
         (774 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004893-1|AAO47871.1|  541|Drosophila melanogaster RE51884p pro...   240   1e-63
AY069079-1|AAL39224.1|  541|Drosophila melanogaster GH09383p pro...   240   1e-63
AE014297-3582|AAN14008.1|  541|Drosophila melanogaster CG6668-PB...   240   1e-63
AE014297-3581|AAF56318.1|  541|Drosophila melanogaster CG6668-PA...   240   1e-63
AY061417-1|AAL28965.1|  487|Drosophila melanogaster LD34806p pro...    29   9.4  
AE014134-2290|AAN10825.1|  487|Drosophila melanogaster CG31849-P...    29   9.4  

>BT004893-1|AAO47871.1|  541|Drosophila melanogaster RE51884p
           protein.
          Length = 541

 Score =  240 bits (588), Expect = 1e-63
 Identities = 110/199 (55%), Positives = 145/199 (72%), Gaps = 1/199 (0%)
 Frame = +1

Query: 181 VEVVKVTDDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFLRYLKAP 360
           V+V+  +++HT+ LNEDAL  +L+RDEVKD           +R GKSFLLDFFLRY+ + 
Sbjct: 6   VQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSK 65

Query: 361 PSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPIVTRF-NDQKVAVVLMDTQGT 537
               D+  WLG E +PL GF WR G +R TTGI++WS+  +  + N  K+A++L+DTQG 
Sbjct: 66  YVHHDATDWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGA 125

Query: 538 FDNSSTVRDSSTIFALSTLLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQ 717
           FD+ STVRD +T+FALST+LSS+QIYNL +NI+EDDLQHL LFTEYGRLA  D  +  FQ
Sbjct: 126 FDSQSTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQ 185

Query: 718 VLMFLVRDWAYPYQHAFGA 774
            L FLVRDW++PY+  +GA
Sbjct: 186 RLQFLVRDWSFPYEAEYGA 204


>AY069079-1|AAL39224.1|  541|Drosophila melanogaster GH09383p
           protein.
          Length = 541

 Score =  240 bits (588), Expect = 1e-63
 Identities = 110/199 (55%), Positives = 145/199 (72%), Gaps = 1/199 (0%)
 Frame = +1

Query: 181 VEVVKVTDDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFLRYLKAP 360
           V+V+  +++HT+ LNEDAL  +L+RDEVKD           +R GKSFLLDFFLRY+ + 
Sbjct: 6   VQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSK 65

Query: 361 PSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPIVTRF-NDQKVAVVLMDTQGT 537
               D+  WLG E +PL GF WR G +R TTGI++WS+  +  + N  K+A++L+DTQG 
Sbjct: 66  YVHHDATDWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGA 125

Query: 538 FDNSSTVRDSSTIFALSTLLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQ 717
           FD+ STVRD +T+FALST+LSS+QIYNL +NI+EDDLQHL LFTEYGRLA  D  +  FQ
Sbjct: 126 FDSQSTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQ 185

Query: 718 VLMFLVRDWAYPYQHAFGA 774
            L FLVRDW++PY+  +GA
Sbjct: 186 RLQFLVRDWSFPYEAEYGA 204


>AE014297-3582|AAN14008.1|  541|Drosophila melanogaster CG6668-PB,
           isoform B protein.
          Length = 541

 Score =  240 bits (588), Expect = 1e-63
 Identities = 110/199 (55%), Positives = 145/199 (72%), Gaps = 1/199 (0%)
 Frame = +1

Query: 181 VEVVKVTDDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFLRYLKAP 360
           V+V+  +++HT+ LNEDAL  +L+RDEVKD           +R GKSFLLDFFLRY+ + 
Sbjct: 6   VQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSK 65

Query: 361 PSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPIVTRF-NDQKVAVVLMDTQGT 537
               D+  WLG E +PL GF WR G +R TTGI++WS+  +  + N  K+A++L+DTQG 
Sbjct: 66  YVHHDATDWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGA 125

Query: 538 FDNSSTVRDSSTIFALSTLLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQ 717
           FD+ STVRD +T+FALST+LSS+QIYNL +NI+EDDLQHL LFTEYGRLA  D  +  FQ
Sbjct: 126 FDSQSTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQ 185

Query: 718 VLMFLVRDWAYPYQHAFGA 774
            L FLVRDW++PY+  +GA
Sbjct: 186 RLQFLVRDWSFPYEAEYGA 204


>AE014297-3581|AAF56318.1|  541|Drosophila melanogaster CG6668-PA,
           isoform A protein.
          Length = 541

 Score =  240 bits (588), Expect = 1e-63
 Identities = 110/199 (55%), Positives = 145/199 (72%), Gaps = 1/199 (0%)
 Frame = +1

Query: 181 VEVVKVTDDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFLRYLKAP 360
           V+V+  +++HT+ LNEDAL  +L+RDEVKD           +R GKSFLLDFFLRY+ + 
Sbjct: 6   VQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRYMYSK 65

Query: 361 PSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPIVTRF-NDQKVAVVLMDTQGT 537
               D+  WLG E +PL GF WR G +R TTGI++WS+  +  + N  K+A++L+DTQG 
Sbjct: 66  YVHHDATDWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILLDTQGA 125

Query: 538 FDNSSTVRDSSTIFALSTLLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQ 717
           FD+ STVRD +T+FALST+LSS+QIYNL +NI+EDDLQHL LFTEYGRLA  D  +  FQ
Sbjct: 126 FDSQSTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTGKKPFQ 185

Query: 718 VLMFLVRDWAYPYQHAFGA 774
            L FLVRDW++PY+  +GA
Sbjct: 186 RLQFLVRDWSFPYEAEYGA 204


>AY061417-1|AAL28965.1|  487|Drosophila melanogaster LD34806p
           protein.
          Length = 487

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 33/121 (27%), Positives = 45/121 (37%), Gaps = 3/121 (2%)
 Frame = +1

Query: 346 YLKAPPSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEP--IVTRFNDQKVAVVL 519
           YL APP  R  + W G+ D      IWRA            S P  +V   +     +  
Sbjct: 153 YLMAPPQCRCESGWHGR-DCGQPEIIWRALMTSNRASKRGGSTPLQLVEASSSSLHRLFY 211

Query: 520 MDTQGTFDNSSTVRDSSTIFALSTLLSSIQIYNLKENIKEDDLQH-LHLFTEYGRLACDD 696
           M   G +D+ S       I AL  ++    IY +    KE  L+  L   T Y  L C  
Sbjct: 212 MLELGAWDHLSLELLELQIRALIEVVDYFLIYYVSNGSKERSLESMLGSQTSYTLLRCSS 271

Query: 697 D 699
           +
Sbjct: 272 E 272


>AE014134-2290|AAN10825.1|  487|Drosophila melanogaster CG31849-PA
           protein.
          Length = 487

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 33/121 (27%), Positives = 45/121 (37%), Gaps = 3/121 (2%)
 Frame = +1

Query: 346 YLKAPPSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEP--IVTRFNDQKVAVVL 519
           YL APP  R  + W G+ D      IWRA            S P  +V   +     +  
Sbjct: 153 YLMAPPQCRCESGWHGR-DCGQPEIIWRALMTSNRASKRGGSTPLQLVEASSSSLHRLFY 211

Query: 520 MDTQGTFDNSSTVRDSSTIFALSTLLSSIQIYNLKENIKEDDLQH-LHLFTEYGRLACDD 696
           M   G +D+ S       I AL  ++    IY +    KE  L+  L   T Y  L C  
Sbjct: 212 MLELGAWDHLSLELLELQIRALIEVVDYFLIYYVSNGSKERSLESMLGSQTSYTLLRCSS 271

Query: 697 D 699
           +
Sbjct: 272 E 272


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,129,959
Number of Sequences: 53049
Number of extensions: 639983
Number of successful extensions: 1851
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1847
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)