Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16j10f
(451 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0460 + 5954548-5954816,5954940-5954997 31 0.57
01_05_0195 - 19111983-19112477,19112646-19113950,19114053-191143... 29 1.3
04_01_0229 - 2897484-2900402 29 2.3
01_06_0644 + 30821811-30821855,30822707-30822976,30823079-308243... 28 3.0
01_01_1192 + 9511961-9512977,9513860-9514078 28 3.0
12_02_0142 - 14306325-14306490,14306584-14306687,14306788-143069... 27 5.3
12_01_0046 - 373974-374188,374298-374580,374698-374764,375705-37... 27 5.3
11_04_0107 + 13517573-13517710,13517827-13517994 27 5.3
11_02_0017 + 7404766-7405239 27 5.3
10_08_0236 + 16078162-16078731 27 5.3
01_06_1756 - 39676340-39676615 27 5.3
12_02_1222 + 27145264-27148287 27 7.0
08_01_0796 - 7696339-7696457,7696749-7696795,7696813-7697084 27 7.0
10_05_0011 - 7822847-7822880,7823653-7823754,7823859-7824106,782... 27 9.2
09_06_0123 - 20997498-20997512,20998015-20998100,20999066-209991... 27 9.2
07_01_0392 - 2970586-2970688,2972714-2972815,2972902-2973056,297... 27 9.2
06_03_0776 + 24517246-24517396,24517613-24517617 27 9.2
05_07_0145 + 28012268-28012624,28012734-28012794,28013758-280138... 27 9.2
05_05_0142 - 22673607-22674134 27 9.2
04_01_0330 - 4369326-4370852 27 9.2
03_06_0014 - 31012116-31012229,31012773-31012985,31013058-310131... 27 9.2
>04_01_0460 + 5954548-5954816,5954940-5954997
Length = 108
Score = 30.7 bits (66), Expect = 0.57
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 284 GCGNDGSRDDHWLGSNGSNVSNLDRLGDG-AIDNNHGLSNDFGFVNDNHGLRDNGIDTGS 108
G G +D+ GS + + +G G ++DN+H + D NHG D G TG+
Sbjct: 29 GTGTTAEQDNTG-GSTSAKHTLPQAVGSGTSVDNHHAIPRD---QYSNHGGDDGGGSTGT 84
Query: 107 GD 102
GD
Sbjct: 85 GD 86
>01_05_0195 - 19111983-19112477,19112646-19113950,19114053-19114322,
19118884-19118950,19119229-19119284,19119530-19119590,
19120181-19120297,19120570-19120682,19120774-19120848,
19121464-19122045,19122056-19122271,19122372-19122497,
19126152-19126190,19126266-19126360,19126423-19126962,
19127102-19127327,19127385-19127437,19127534-19127701,
19128353-19128707,19128785-19128876,19129891-19129993
Length = 1717
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 134 RDNGIDTGSGDNRGRASLVDVQNDLHERSAVSN 36
R G G G RGR++L + D HE SA+S+
Sbjct: 1038 RGGGGRRGRGRGRGRSALAENDMDFHETSALSS 1070
>04_01_0229 - 2897484-2900402
Length = 972
Score = 28.7 bits (61), Expect = 2.3
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Frame = -3
Query: 329 DIDRYSVKGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDF---- 162
D + VK + S+ N S DH G+ N G+G N LSN+F
Sbjct: 490 DHSSHHVKWIGTSNKDLTNKSS--DHVEGNESDLNDNSSGHGEGIGSGNKHLSNNFLNHV 547
Query: 161 ---GF-VNDNHGLRDNGIDTGSGD 102
GF +NDN + GI +G D
Sbjct: 548 EGIGFDLNDNSSDHEEGIGSGKKD 571
>01_06_0644 +
30821811-30821855,30822707-30822976,30823079-30824383,
30824551-30824692,30824752-30825275
Length = 761
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 134 RDNGIDTGSGDNRGRASLVDVQNDLHERSAVSN 36
R G G G RGR++L + D HE SA S+
Sbjct: 25 RGGGGRRGRGRGRGRSALAENDMDFHETSAPSS 57
>01_01_1192 + 9511961-9512977,9513860-9514078
Length = 411
Score = 28.3 bits (60), Expect = 3.0
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Frame = -3
Query: 320 RYSVKGLRKSDSGC-GNDG----SRDDHWLGSNGSNVSNLDRLG 204
R + K KSD G G+DG S DHW G NG + + R G
Sbjct: 331 RSTTKQWLKSDDGLIGDDGMAGRSYPDHWKGENGLYCAGMVRRG 374
>12_02_0142 -
14306325-14306490,14306584-14306687,14306788-14306967,
14307155-14307253,14307346-14307535,14307722-14307748,
14308190-14308506,14308532-14308675,14308799-14308905,
14309085-14309357,14309470-14309827
Length = 654
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -3
Query: 308 KGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVND 147
K +K + + DD + N N N D LG GA G++ DF +N+
Sbjct: 180 KKKKKKKATRKSSSDEDDVEVEENKENTDNEDGLGIGAGVAQDGVAQDFASLNE 233
>12_01_0046 -
373974-374188,374298-374580,374698-374764,375705-375889
Length = 249
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -3
Query: 281 CGNDGSRDDHWL---GSNGSNVSNLDRLGDGAIDNNHGLSND 165
CGND R + L GS G + RLG +++++HG D
Sbjct: 208 CGNDKDRFEQQLLPCGSIGLEMPFTCRLGPASVNSSHGEKED 249
>11_04_0107 + 13517573-13517710,13517827-13517994
Length = 101
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -3
Query: 290 DSGCGNDGSRDDHWLGSNGSNVSNLDRLG 204
DSG ND R WLG +GS +NL R G
Sbjct: 38 DSGWDNDEERLGLWLG-DGSGDNNLARFG 65
>11_02_0017 + 7404766-7405239
Length = 157
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 299 RKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGL 135
R C GS DD GS + + + + GA+ D+G +DNHGL
Sbjct: 23 RSIPDDCETGGSIDDGDGGSGSAGLGSGGSVAIGALTAAVTTMLDYGDHDDNHGL 77
>10_08_0236 + 16078162-16078731
Length = 189
Score = 27.5 bits (58), Expect = 5.3
Identities = 27/90 (30%), Positives = 35/90 (38%)
Frame = -3
Query: 353 ESGHGGHVDIDRYSVKGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGL 174
E G+GG D G + G G+ GS GS SN +N N +G
Sbjct: 104 EGGYGGESDAGGGGGGGGQGQAGGYGSTGSGSGSGSGSGYSNANN----------NWYGS 153
Query: 173 SNDFGFVNDNHGLRDNGIDTGSGDNRGRAS 84
S G + N G NG + G+G G S
Sbjct: 154 SAGAG-ASGNGGGNGNGENGGNGSGAGGGS 182
>01_06_1756 - 39676340-39676615
Length = 91
Score = 27.5 bits (58), Expect = 5.3
Identities = 21/89 (23%), Positives = 33/89 (37%)
Frame = -3
Query: 344 HGGHVDIDRYSVKGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSND 165
H VD V+ + + G G + H + +DR G G +NH ND
Sbjct: 3 HYQEVDYCSEEVRSVTPTGGFLGRGGVQQQHVVKET---FQEIDRSGSGRHHHNHNHGND 59
Query: 164 FGFVNDNHGLRDNGIDTGSGDNRGRASLV 78
+ V + D TG R ++ L+
Sbjct: 60 YLMVRETKVEEDFNTCTGEFRERKQSFLL 88
>12_02_1222 + 27145264-27148287
Length = 1007
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 272 DGSRDDHWLGSNGSNVSNLDRLGDGAI 192
DG RD++ +GS GS +LG GA+
Sbjct: 679 DGVRDENLIGSGGSGNVYRVKLGSGAV 705
>08_01_0796 - 7696339-7696457,7696749-7696795,7696813-7697084
Length = 145
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 323 DRYSVKGLRKSDSGCGNDGSRDDHWLGSNGSNV 225
DR+ V+ K D GC + ++D+H GS+ S V
Sbjct: 10 DRHEVE-TEKGDHGCQQNKAKDEHRHGSDASIV 41
>10_05_0011 - 7822847-7822880,7823653-7823754,7823859-7824106,
7824195-7824240,7824368-7825984,7826673-7826797,
7826915-7829083
Length = 1446
Score = 26.6 bits (56), Expect = 9.2
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = -3
Query: 329 DIDRYSVKGLRKSDSGCGNDGSRDDHWLGSN-GSNVSNLDRLGDGAIDNNHGLSN---DF 162
D R V L + N G ++ + N GS++ N+D++GD + + L
Sbjct: 963 DYQRMRVANLSDDATTTTNSGRQEIKRVVENDGSDIPNMDQMGDILLGKKNALQRPLMQH 1022
Query: 161 GFVNDNHG 138
G +N + G
Sbjct: 1023 GIINSSQG 1030
>09_06_0123 -
20997498-20997512,20998015-20998100,20999066-20999198,
20999264-20999341,21000130-21000216,21001164-21001254,
21001338-21001488,21001567-21002296,21002404-21002820
Length = 595
Score = 26.6 bits (56), Expect = 9.2
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = -3
Query: 299 RKSDSGCGNDGSRDDHWLGS-NGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNG 123
R ++ G DGS +D LGS +GSN S G G +N G N N+ + +G
Sbjct: 204 RDGNTSDGGDGSWNDGGLGSGSGSNSS----YGHG------NSTNGAGGANMNNIIHSSG 253
Query: 122 IDTGSGDNRGRASLVDVQNDLHERSAVSN 36
+ + D+ R S + N+ + RSA SN
Sbjct: 254 TSSSANDSSRRISGNNNWNN-NGRSAGSN 281
>07_01_0392 -
2970586-2970688,2972714-2972815,2972902-2973056,
2973492-2973624,2973657-2973763
Length = 199
Score = 26.6 bits (56), Expect = 9.2
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 101 CPRTRCRCHYP 133
CPR RCRC +P
Sbjct: 19 CPRHRCRCQWP 29
>06_03_0776 + 24517246-24517396,24517613-24517617
Length = 51
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 113 GSGDNRGRASLVDVQND-LHERSAVSNGGKRRV 18
G GD RGRA +D + + L ER GG+ RV
Sbjct: 5 GGGDRRGRAGAIDKRVERLWERGG-EEGGENRV 36
>05_07_0145 +
28012268-28012624,28012734-28012794,28013758-28013852,
28013944-28014056,28014436-28014604,28014677-28014716,
28014797-28014861,28015485-28015598,28015687-28015751,
28015927-28016083,28016167-28016286,28016447-28016535,
28016631-28016715
Length = 509
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -3
Query: 212 RLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDNRGRASLVDVQNDL 60
++G D HG+S V D+ NG+ +G N ++V +QN L
Sbjct: 347 QVGLCTFDGKHGVSAGIKSVVDDEAGESNGLQSGPMCNACEMAVVWMQNQL 397
>05_05_0142 - 22673607-22674134
Length = 175
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/55 (27%), Positives = 19/55 (34%)
Frame = -3
Query: 269 GSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSG 105
G R W G G ++ G+G G + G D G G D G G
Sbjct: 111 GRRGRRWRGRGGGGEEGVEGSGEG---GGEGGGGEEGVEGDGEGGEGGGFDGGEG 162
>04_01_0330 - 4369326-4370852
Length = 508
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = -3
Query: 392 HLIK*LKFRLRAPESGHGGHVDIDRYSVKGLRKSDSGCGNDGSRDD 255
H + L+ R R P GH D D Y + G G+D D+
Sbjct: 437 HKLPLLQRRRRTPSYGHDHDDDDDNYDGNADADDNGGGGDDDGEDE 482
>03_06_0014 -
31012116-31012229,31012773-31012985,31013058-31013171,
31013909-31014040,31014624-31014692,31014763-31015017,
31015347-31015520,31016104-31016280,31016999-31017107,
31017343-31017506,31018221-31018517
Length = 605
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Frame = -3
Query: 206 GDGAIDNNHGLSNDFGFVNDNHGLRDNG-----IDTGSGDNRGRASLV-DVQNDLHE 54
GDG + L++ V + +GL DNG + G G+++G + + +++ D H+
Sbjct: 66 GDGGQLQDRRLASPAAEVVEEYGLEDNGHGGDQWEEGQGESQGSSGMAQEIEGDSHD 122
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,490,757
Number of Sequences: 37544
Number of extensions: 192761
Number of successful extensions: 660
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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