Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16j10f
(451 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p... 38 0.003
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p... 38 0.003
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 38 0.003
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 37 0.006
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 37 0.006
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 33 0.073
AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal che... 33 0.13
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 31 0.51
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 31 0.51
Z75550-7|CAA99925.2| 195|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 2.1
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 28 2.7
U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. 28 3.6
U23529-4|AAK39164.2| 545|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 27 6.3
L16685-3|AAA28169.3| 321|Caenorhabditis elegans Hypothetical pr... 27 6.3
AC006665-3|AAF39905.1| 605|Caenorhabditis elegans Hypothetical ... 27 6.3
Z81097-10|CAB03169.1| 492|Caenorhabditis elegans Hypothetical p... 27 8.3
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 27 8.3
X59156-6|CAA41878.1| 160|Caenorhabditis elegans transposase pro... 27 8.3
DQ384615-1|ABD34785.1| 492|Caenorhabditis elegans ERGIC-53-like... 27 8.3
AL132943-4|CAB81975.1| 690|Caenorhabditis elegans Hypothetical ... 27 8.3
AF043698-2|AAB97559.3| 700|Caenorhabditis elegans Hypothetical ... 27 8.3
AC006641-4|AAF39819.2| 477|Caenorhabditis elegans Hypothetical ... 27 8.3
>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 37.9 bits (84), Expect = 0.003
Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Frame = -3
Query: 350 SGHGGHVDIDRYSVKGLRKSDSGCGN-DGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGL 174
+G+G + D ++SG GN DGS + G+ G+ N + GDG N +G
Sbjct: 557 NGNGNGLTGDGNGTGDGDNNESGNGNGDGSDKNSGAGA-GTKPENREG-GDG---NGNGT 611
Query: 173 SNDFGFVNDNHGLRDNGIDTGSGDNRGRA--SLVDVQNDLHERSAVSNG 33
+ G NDN G G+ TGSGD +G S ++D E A SNG
Sbjct: 612 GDGNGDGNDN-GNGSKGLGTGSGDGKGEGNKSGTPGKSDGKEDGAGSNG 659
Score = 32.7 bits (71), Expect = 0.13
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Frame = -3
Query: 350 SGHGGHVDIDRYSVKGLRKSDSGCGNDGSRDDHWLGSNGS-NVSNLDRLGDGAIDNNHGL 174
SG+G D ++ G + +G DGS D G+ G+ + + + G G+ DN+
Sbjct: 660 SGNGKEGDGNKSGGSGKGGAGNGKSGDGSGDGKNNGNGGTGDGKDKNGKGSGSGDNDKSG 719
Query: 173 SNDFGFVNDNHGLRDNGID---TGSGDNRGRASLVDVQNDLHERSAVSNGGKR 24
+ G N + NG D +GSGD G D + A GK+
Sbjct: 720 TRAAGKGNAEGNGKGNGNDGKGSGSGDGSGAGGKGDKSDSESGNEADGKDGKK 772
Score = 31.5 bits (68), Expect = 0.29
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = -3
Query: 287 SGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGS 108
+G GN D + G +G + + GDG+ D G +N G D G NG +GS
Sbjct: 658 NGSGNGKEGDGNKSGGSGKGGAGNGKSGDGSGD---GKNNGNGGTGD--GKDKNGKGSGS 712
Query: 107 GDN 99
GDN
Sbjct: 713 GDN 715
Score = 28.3 bits (60), Expect = 2.7
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = -3
Query: 206 GDGAIDNN---HGLSNDFGFVNDN-HGLRDNGIDTGSGDN 99
GDG DNN +G + G N N +GL +G TG GDN
Sbjct: 536 GDGDKDNNGKGNGTGDGDGDGNGNGNGLTGDGNGTGDGDN 575
Score = 26.6 bits (56), Expect = 8.3
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -3
Query: 296 KSDSGCGN-DGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGI 120
K +G GN DG +D++ G NG+ + D G+G G G N++ +G
Sbjct: 528 KGGAGNGNGDGDKDNNGKG-NGTGDGDGDGNGNGNGLTGDGNGTGDGDNNESGNGNGDGS 586
Query: 119 DTGSGDNRG 93
D SG G
Sbjct: 587 DKNSGAGAG 595
>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 37.9 bits (84), Expect = 0.003
Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Frame = -3
Query: 350 SGHGGHVDIDRYSVKGLRKSDSGCGN-DGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGL 174
+G+G + D ++SG GN DGS + G+ G+ N + GDG N +G
Sbjct: 557 NGNGNGLTGDGNGTGDGDNNESGNGNGDGSDKNSGAGA-GTKPENREG-GDG---NGNGT 611
Query: 173 SNDFGFVNDNHGLRDNGIDTGSGDNRGRA--SLVDVQNDLHERSAVSNG 33
+ G NDN G G+ TGSGD +G S ++D E A SNG
Sbjct: 612 GDGNGDGNDN-GNGSKGLGTGSGDGKGEGNKSGTPGKSDGKEDGAGSNG 659
Score = 32.7 bits (71), Expect = 0.13
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Frame = -3
Query: 350 SGHGGHVDIDRYSVKGLRKSDSGCGNDGSRDDHWLGSNGS-NVSNLDRLGDGAIDNNHGL 174
SG+G D ++ G + +G DGS D G+ G+ + + + G G+ DN+
Sbjct: 660 SGNGKEGDGNKSGGSGKGGAGNGKSGDGSGDGKNNGNGGTGDGKDKNGKGSGSGDNDKSG 719
Query: 173 SNDFGFVNDNHGLRDNGID---TGSGDNRGRASLVDVQNDLHERSAVSNGGKR 24
+ G N + NG D +GSGD G D + A GK+
Sbjct: 720 TRAAGKGNAEGNGKGNGNDGKGSGSGDGSGAGGKGDKSDSESGNEADGKDGKK 772
Score = 31.5 bits (68), Expect = 0.29
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = -3
Query: 287 SGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGS 108
+G GN D + G +G + + GDG+ D G +N G D G NG +GS
Sbjct: 658 NGSGNGKEGDGNKSGGSGKGGAGNGKSGDGSGD---GKNNGNGGTGD--GKDKNGKGSGS 712
Query: 107 GDN 99
GDN
Sbjct: 713 GDN 715
Score = 28.3 bits (60), Expect = 2.7
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = -3
Query: 206 GDGAIDNN---HGLSNDFGFVNDN-HGLRDNGIDTGSGDN 99
GDG DNN +G + G N N +GL +G TG GDN
Sbjct: 536 GDGDKDNNGKGNGTGDGDGDGNGNGNGLTGDGNGTGDGDN 575
Score = 26.6 bits (56), Expect = 8.3
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -3
Query: 296 KSDSGCGN-DGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGI 120
K +G GN DG +D++ G NG+ + D G+G G G N++ +G
Sbjct: 528 KGGAGNGNGDGDKDNNGKG-NGTGDGDGDGNGNGNGLTGDGNGTGDGDNNESGNGNGDGS 586
Query: 119 DTGSGDNRG 93
D SG G
Sbjct: 587 DKNSGAGAG 595
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 37.9 bits (84), Expect = 0.003
Identities = 24/97 (24%), Positives = 42/97 (43%)
Frame = -3
Query: 323 DRYSVKGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDN 144
+ +S + RK N+ D+ NG N + D +++G ++D G +DN
Sbjct: 148 EEWSRRSRRKCGEESDNEIESDNGEASDNGEESDNGEE-SDNEEASDNGEASDNGEESDN 206
Query: 143 HGLRDNGIDTGSGDNRGRASLVDVQNDLHERSAVSNG 33
DNG ++ +G+ RG D ++ A NG
Sbjct: 207 EEASDNGEESDNGEERGNGEASDNGDESDNGEASDNG 243
Score = 37.1 bits (82), Expect = 0.006
Identities = 23/106 (21%), Positives = 44/106 (41%)
Frame = -3
Query: 350 SGHGGHVDIDRYSVKGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLS 171
S +G D S G + + ++G D+ S+ S+ + D ++++G +
Sbjct: 252 SDNGEESDNGEESDNGEERGNGEASDNGDESDNGEASDNGEESDNEEASDNGEESDNGEA 311
Query: 170 NDFGFVNDNHGLRDNGIDTGSGDNRGRASLVDVQNDLHERSAVSNG 33
+D G +DN DNG ++ +G+ D + A NG
Sbjct: 312 SDNGEESDNEEASDNGEESDNGEASDNGEESDNGEERDNGEASDNG 357
Score = 34.7 bits (76), Expect = 0.031
Identities = 20/83 (24%), Positives = 38/83 (45%)
Frame = -3
Query: 350 SGHGGHVDIDRYSVKGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLS 171
S +G D S G + ++G D+ S+ S+ + D ++++G +
Sbjct: 276 SDNGDESDNGEASDNGEESDNEEASDNGEESDNGEASDNGEESDNEEASDNGEESDNGEA 335
Query: 170 NDFGFVNDNHGLRDNGIDTGSGD 102
+D G +DN RDNG + +G+
Sbjct: 336 SDNGEESDNGEERDNGEASDNGE 358
Score = 32.3 bits (70), Expect = 0.17
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Frame = -3
Query: 353 ESGHGGHVDIDRYSVKGLRKSDSG--CGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNN- 183
ES +G D + S G SD+G N+ + D+ NG N + +G +N
Sbjct: 179 ESDNGEESDNEEASDNG-EASDNGEESDNEEASDNGEESDNGEERGNGEASDNGDESDNG 237
Query: 182 ----HGLSNDFGFVNDNHGLRDNGIDTGSGDNRGRASLVDVQNDLHERSAVSNG 33
+G +D +DN DNG ++ +G+ RG D ++ A NG
Sbjct: 238 EASDNGEESDNEEASDNGEESDNGEESDNGEERGNGEASDNGDESDNGEASDNG 291
Score = 32.3 bits (70), Expect = 0.17
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Frame = -3
Query: 353 ESGHGGHVDIDRYSVKGLRKSDSG--CGNDGSRDDHWLGSNGSNVSNLDRLGDG-AIDN- 186
E G+G D S G SD+G N+ + D+ NG N + G+G A DN
Sbjct: 221 ERGNGEASDNGDESDNG-EASDNGEESDNEEASDNGEESDNGEESDNGEERGNGEASDNG 279
Query: 185 ---NHGLSNDFGFVNDNHGLRDNG--IDTGSGDNRGRASLVDVQNDLHERS 48
++G ++D G +DN DNG D G + G S + +D E S
Sbjct: 280 DESDNGEASDNGEESDNEEASDNGEESDNGEASDNGEESDNEEASDNGEES 330
Score = 31.9 bits (69), Expect = 0.22
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = -3
Query: 296 KSDSGCGND-GSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGI 120
+SD+G +D G D+ S+ S+ D ++++ ++D G +DN R NG
Sbjct: 167 ESDNGEASDNGEESDNGEESDNEEASDNGEASDNGEESDNEEASDNGEESDNGEERGNGE 226
Query: 119 DTGSGDNRGRASLVDVQNDLHERSAVSNG 33
+ +GD D + A NG
Sbjct: 227 ASDNGDESDNGEASDNGEESDNEEASDNG 255
Score = 30.3 bits (65), Expect = 0.68
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
Frame = -3
Query: 350 SGHGGHVDIDRYSVKGLRKSDSG--CGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHG 177
S +G D + S G +SD+G GN + D+ NG N + D +++G
Sbjct: 198 SDNGEESDNEEASDNG-EESDNGEERGNGEASDNGDESDNGEASDNGEE-SDNEEASDNG 255
Query: 176 LSNDFGFVNDNHGLRDNGIDTGSGDNRGRASLVDVQNDLHERSAVSNG 33
+D G +DN R NG + +GD D + A NG
Sbjct: 256 EESDNGEESDNGEERGNGEASDNGDESDNGEASDNGEESDNEEASDNG 303
Score = 30.3 bits (65), Expect = 0.68
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = -3
Query: 350 SGHGGHVDIDRYSVKGLRKSDSGCGND-GSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGL 174
S +G D + S G +SD+G +D G D+ S+ S+ D ++++G
Sbjct: 288 SDNGEESDNEEASDNG-EESDNGEASDNGEESDNEEASDNGEESDNGEASDNGEESDNGE 346
Query: 173 SNDFGFVNDNHGLRDNGIDTG 111
D G +DN +NG + G
Sbjct: 347 ERDNGEASDNGEESENGEEIG 367
Score = 29.1 bits (62), Expect = 1.6
Identities = 19/77 (24%), Positives = 31/77 (40%)
Frame = -3
Query: 353 ESGHGGHVDIDRYSVKGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGL 174
ES +G D S G + ++G D+ S+ S+ D + +G
Sbjct: 167 ESDNGEASDNGEESDNGEESDNEEASDNGEASDNGEESDNEEASDNGEESDNGEERGNGE 226
Query: 173 SNDFGFVNDNHGLRDNG 123
++D G +DN DNG
Sbjct: 227 ASDNGDESDNGEASDNG 243
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -3
Query: 293 SDSGCGND-GSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGID 117
SD+G +D G D+ S+ S+ D +++G +D G DN DNG +
Sbjct: 300 SDNGEESDNGEASDNGEESDNEEASDNGEESDNGEASDNGEESDNGEERDNGEASDNGEE 359
Query: 116 TGSGDNRG 93
+ +G+ G
Sbjct: 360 SENGEEIG 367
Score = 28.3 bits (60), Expect = 2.7
Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = -3
Query: 293 SDSGCGND-GSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGID 117
SD+G +D G D+ S+ S+ D ++++G G +DN DNG
Sbjct: 228 SDNGDESDNGEASDNGEESDNEEASDNGEESDNGEESDNGEERGNGEASDNGDESDNGEA 287
Query: 116 TGSGDNRGRASLVDVQNDLHERSAVSNG 33
+ +G+ D + A NG
Sbjct: 288 SDNGEESDNEEASDNGEESDNGEASDNG 315
Score = 27.9 bits (59), Expect = 3.6
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
Frame = -3
Query: 296 KSDSGCGNDGSR-DDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGI 120
+SD+G +D D+ S+ S+ + D ++++G G +DN DNG
Sbjct: 179 ESDNGEESDNEEASDNGEASDNGEESDNEEASDNGEESDNGEERGNGEASDNGDESDNGE 238
Query: 119 DTGSGDNRGRASLVDVQNDLHERSAVSNGGKR 24
+ +G+ D + NG +R
Sbjct: 239 ASDNGEESDNEEASDNGEESDNGEESDNGEER 270
Score = 26.6 bits (56), Expect = 8.3
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = -3
Query: 353 ESGHGGHVDIDRYSVKGLRKSDSGCGNDGSR-DDHWLGSNGSNVSNLDRLGDGAIDNNHG 177
E G+G D S G SD+G +D D+ S+ S+ D +++G
Sbjct: 269 ERGNGEASDNGDESDNG-EASDNGEESDNEEASDNGEESDNGEASDNGEESDNEEASDNG 327
Query: 176 LSNDFGFVNDNHGLRDNGIDTGSGD 102
+D G +DN DNG + +G+
Sbjct: 328 EESDNGEASDNGEESDNGEERDNGE 352
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 37.1 bits (82), Expect = 0.006
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = -3
Query: 293 SDSGCGNDGSRDDHWLGS---NGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNG 123
S +G G++ +R+D W S N +N +N + G G NN G +G N+N+G N
Sbjct: 419 SKNGYGSNNNRNDGWGSSSSNNNNNNNNNNNGGTGGYSNNGG---GWGSNNNNNGNDGNN 475
Query: 122 IDTGSGDNRG 93
++ +G N G
Sbjct: 476 WESNNGGNGG 485
Score = 31.5 bits (68), Expect = 0.29
Identities = 25/85 (29%), Positives = 32/85 (37%)
Frame = -3
Query: 284 GCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSG 105
G GN D+W GS+GS SN GD N N G + G D
Sbjct: 265 GSGNSNGNSDNWGGSSGSG-SNGGNDGDSNYGNEGSWKPSGNSYGRNRGGGNEGGDQWGS 323
Query: 104 DNRGRASLVDVQNDLHERSAVSNGG 30
+N G + ++L SNGG
Sbjct: 324 NNNGGD---NYGSELSNNWGGSNGG 345
Score = 30.3 bits (65), Expect = 0.68
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = -3
Query: 293 SDSGCGNDGSR-DDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGID 117
+++G N GS ++W GSNG + SN G G DN++ SN+ ++ G NG
Sbjct: 324 NNNGGDNYGSELSNNWGGSNGGSGSN-GGSGGGNTDNDNWGSNN----GNSGGSWGNGGT 378
Query: 116 TGSGDNRG 93
GSG + G
Sbjct: 379 GGSGGSGG 386
Score = 28.7 bits (61), Expect = 2.1
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Frame = -3
Query: 323 DRYSVKGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDN-NHGLSNDFGFVND 147
+R + G R +G+ D+W + S N G G N N+G + + G+ N+
Sbjct: 176 NRMNKYGNRNDGDDYNGNGNNQDNWNSGSNSGGYNGGGGGSGGGSNWNNGDNENDGWNNN 235
Query: 146 NHGLRDN-------GIDTGSGDNRGRA 87
N+ + N G G+ DN G +
Sbjct: 236 NNNRKSNNNNNNNYGNSWGTNDNDGNS 262
Score = 28.3 bits (60), Expect = 2.7
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = -3
Query: 350 SGHGGHVDIDRYSVKGLRKSDSGCGNDGSRDDHWLGS---NGSNVSNLDRLGDGAIDNNH 180
SG G D D Y G +G GN + +D++ G NG +N G G+ +N+
Sbjct: 384 SGGGNWGDNDNY---GSSNKWNGNGNQDNDNDNFGGGYSKNGYGSNNNRNDGWGSSSSNN 440
Query: 179 GLSNDFGFVNDNHGLRDNGIDTGSGDN 99
+N+ G +NG GS +N
Sbjct: 441 NNNNNNNNNGGTGGYSNNGGGWGSNNN 467
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 37.1 bits (82), Expect = 0.006
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = -3
Query: 293 SDSGCGNDGSRDDHWLGS---NGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNG 123
S +G G++ +R+D W S N +N +N + G G NN G +G N+N+G N
Sbjct: 419 SKNGYGSNNNRNDGWGSSSSNNNNNNNNNNNGGTGGYSNNGG---GWGSNNNNNGNDGNN 475
Query: 122 IDTGSGDNRG 93
++ +G N G
Sbjct: 476 WESNNGGNGG 485
Score = 31.5 bits (68), Expect = 0.29
Identities = 25/85 (29%), Positives = 32/85 (37%)
Frame = -3
Query: 284 GCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSG 105
G GN D+W GS+GS SN GD N N G + G D
Sbjct: 265 GSGNSNGNSDNWGGSSGSG-SNGGNDGDSNYGNEGSWKPSGNSYGRNRGGGNEGGDQWGS 323
Query: 104 DNRGRASLVDVQNDLHERSAVSNGG 30
+N G + ++L SNGG
Sbjct: 324 NNNGGD---NYGSELSNNWGGSNGG 345
Score = 30.3 bits (65), Expect = 0.68
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = -3
Query: 293 SDSGCGNDGSR-DDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGID 117
+++G N GS ++W GSNG + SN G G DN++ SN+ ++ G NG
Sbjct: 324 NNNGGDNYGSELSNNWGGSNGGSGSN-GGSGGGNTDNDNWGSNN----GNSGGSWGNGGT 378
Query: 116 TGSGDNRG 93
GSG + G
Sbjct: 379 GGSGGSGG 386
Score = 28.7 bits (61), Expect = 2.1
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Frame = -3
Query: 323 DRYSVKGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDN-NHGLSNDFGFVND 147
+R + G R +G+ D+W + S N G G N N+G + + G+ N+
Sbjct: 176 NRMNKYGNRNDGDDYNGNGNNQDNWNSGSNSGGYNGGGGGSGGGSNWNNGDNENDGWNNN 235
Query: 146 NHGLRDN-------GIDTGSGDNRGRA 87
N+ + N G G+ DN G +
Sbjct: 236 NNNRKSNNNNNNNYGNSWGTNDNDGNS 262
Score = 28.3 bits (60), Expect = 2.7
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = -3
Query: 350 SGHGGHVDIDRYSVKGLRKSDSGCGNDGSRDDHWLGS---NGSNVSNLDRLGDGAIDNNH 180
SG G D D Y G +G GN + +D++ G NG +N G G+ +N+
Sbjct: 384 SGGGNWGDNDNY---GSSNKWNGNGNQDNDNDNFGGGYSKNGYGSNNNRNDGWGSSSSNN 440
Query: 179 GLSNDFGFVNDNHGLRDNGIDTGSGDN 99
+N+ G +NG GS +N
Sbjct: 441 NNNNNNNNNGGTGGYSNNGGGWGSNNN 467
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 33.5 bits (73), Expect = 0.073
Identities = 23/67 (34%), Positives = 35/67 (52%)
Frame = -3
Query: 305 GLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDN 126
G S SG GN S + + NG+N N G+G + N+G ++ G N N+G +N
Sbjct: 222 GSNNSGSGNGNSNSGNGNSGNGNGNNAGNSGN-GNGNSNGNNGNGSN-GNGNGNNGNGNN 279
Query: 125 GIDTGSG 105
G + G+G
Sbjct: 280 G-NNGNG 285
Score = 28.3 bits (60), Expect = 2.7
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = -3
Query: 293 SDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDT 114
+ SG N GS + NG++ S G+G +N N G N N+G NG
Sbjct: 214 NSSGNSNYGSNNSG--SGNGNSNSGNGNSGNGNGNNAGNSGNGNGNSNGNNGNGSNGNGN 271
Query: 113 GSGDN 99
G+ N
Sbjct: 272 GNNGN 276
>AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform b protein.
Length = 273
Score = 32.7 bits (71), Expect = 0.13
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = -3
Query: 311 VKGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLR 132
++G SD G G R W ++ ++ N + +G + +HG +ND N+ +
Sbjct: 60 IQGQNGSDHGAYG-GWRQHDWNSTSSWSIGNQLEMENGTLTMSHGATNDGNIRNNQQMMT 118
Query: 131 DNGIDTGS 108
N I T S
Sbjct: 119 SNHITTDS 126
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 30.7 bits (66), Expect = 0.51
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = -3
Query: 308 KGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRD 129
+G D+G G+ +DH S+G + D G N H + G NDNHG
Sbjct: 352 EGNHSHDNGHGHSHDHNDHG-HSHGHDDHGHDSHGHSHDHNEHDHGHSHGGNNDNHG--- 407
Query: 128 NGIDTGSGDNRGRA 87
+ GS ++ G +
Sbjct: 408 HSHSAGSDNHHGHS 421
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 30.7 bits (66), Expect = 0.51
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = -3
Query: 308 KGLRKSDSGCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRD 129
+G D+G G+ +DH S+G + D G N H + G NDNHG
Sbjct: 370 EGNHSHDNGHGHSHDHNDHG-HSHGHDDHGHDSHGHSHDHNEHDHGHSHGGNNDNHG--- 425
Query: 128 NGIDTGSGDNRGRA 87
+ GS ++ G +
Sbjct: 426 HSHSAGSDNHHGHS 439
>Z75550-7|CAA99925.2| 195|Caenorhabditis elegans Hypothetical
protein T22C1.9 protein.
Length = 195
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 338 GHVDIDRYSVKGLRKSDSGCGNDGSRDDH 252
GH D + V G +K D+ NDG RD H
Sbjct: 138 GHDDHKKEDVHGDQKDDNKDRNDGGRDSH 166
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 2.1
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = -3
Query: 278 GNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDN 99
GN G R D W G+ G R GD +NN G N G N++ G G + G G
Sbjct: 80 GNGGGRGD-WGGNGGGGRGGGGR-GDWGGNNNGGGGNWGGGGNNDGGW--GGNNGGGGGG 135
Query: 98 RG 93
RG
Sbjct: 136 RG 137
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 28.3 bits (60), Expect = 2.7
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 3/83 (3%)
Frame = -3
Query: 275 NDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDN---GIDTGSG 105
N RDD+ G+ G L R G ++NH + D+G NH N G GS
Sbjct: 218 NSSGRDDYHHGNGGP----LQRSGSYQHNHNHSNTKDYGRQYSNHNHYSNYHGGGGPGSI 273
Query: 104 DNRGRASLVDVQNDLHERSAVSN 36
R R N+ S S+
Sbjct: 274 SARSRTESHSTTNNYDAFSRTSS 296
>U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein.
Length = 790
Score = 27.9 bits (59), Expect = 3.6
Identities = 26/87 (29%), Positives = 31/87 (35%), Gaps = 7/87 (8%)
Frame = -3
Query: 332 VDIDRYSVKGLRKSDSGCGNDGSRDDHWLGSN---GSNVSNLDRLGDGAIDNNHGLS--- 171
+DI G SG G GS + G G N + G GA D N G
Sbjct: 424 IDIPNDPTLGGPTGSSGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGAGN 483
Query: 170 -NDFGFVNDNHGLRDNGIDTGSGDNRG 93
N G N N NG G+G+ G
Sbjct: 484 GNGAGAGNGNGAGAGNGNGAGAGNGNG 510
>U23529-4|AAK39164.2| 545|Caenorhabditis elegans Hypothetical
protein C15B12.4 protein.
Length = 545
Score = 27.5 bits (58), Expect = 4.8
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = -3
Query: 236 GSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGL-----RDNGIDTGS 108
GS SNLD LG G+ D N +S +N N GL + NGI G+
Sbjct: 196 GSAQSNLD-LGTGSDDQNITISGLVSGLNSNEGLVNTLVKGNGIINGT 242
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 27.1 bits (57), Expect = 6.3
Identities = 18/67 (26%), Positives = 26/67 (38%)
Frame = -3
Query: 284 GCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSG 105
G G G G GSN ++ G+G N G + + G D +G G G+G
Sbjct: 799 GGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGAGNGNGAG 858
Query: 104 DNRGRAS 84
G +
Sbjct: 859 AGNGNGA 865
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical protein
R08B4.1a protein.
Length = 1137
Score = 27.1 bits (57), Expect = 6.3
Identities = 26/87 (29%), Positives = 31/87 (35%), Gaps = 7/87 (8%)
Frame = -3
Query: 332 VDIDRYSVKGLRKSDSGCGNDGSRDDHWLGSN---GSNVSNLDRLGDGAIDNNHGLS--- 171
+DI G SG G GS + G G N + G GA D N G
Sbjct: 771 IDIPNDPTLGGPTGSSGGGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGAGN 830
Query: 170 -NDFGFVNDNHGLRDNGIDTGSGDNRG 93
N G N N NG G+G+ G
Sbjct: 831 GNGAGAGNGNGAGAGNGNGAGAGNGNG 857
>L16685-3|AAA28169.3| 321|Caenorhabditis elegans Hypothetical
protein ZC21.3 protein.
Length = 321
Score = 27.1 bits (57), Expect = 6.3
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 173 SNDFGFVNDNHGLRDNGIDTGSGDNRG 93
SN+ G++N+N G+ + G G+N+G
Sbjct: 177 SNNQGYMNNNQGMYNTQTTQGYGNNQG 203
>AC006665-3|AAF39905.1| 605|Caenorhabditis elegans Hypothetical
protein H27M09.3 protein.
Length = 605
Score = 27.1 bits (57), Expect = 6.3
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 7/95 (7%)
Frame = -3
Query: 362 RAPESGHGGHVDIDRYSVKGLRKSDSGCGNDGSRDD----HWLGSN---GSNVSNLDRLG 204
+ +G GG ++ G+ D G N GS D ++ G + GS + D G
Sbjct: 504 KGTSAGEGGGEGNFDFNFDGIGAGDDGSNNGGSTGDLDFLNYDGEDEGKGSGNTQSDPFG 563
Query: 203 DGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSGDN 99
+ N G D F + G + G +G+G N
Sbjct: 564 FASNGNAAGGGGDGSFNFNFDGDGEGGATSGAGGN 598
>Z81097-10|CAB03169.1| 492|Caenorhabditis elegans Hypothetical
protein K07A1.8 protein.
Length = 492
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 352 RAVMVDMSTLIDIQLRVSGRVTAGAGMMGVATITGLGATG 233
RA + + +DI L++ G+ GA +G+ + LGA G
Sbjct: 79 RAFLESENFQVDIALKIGGQGRVGADGLGIWYTSQLGALG 118
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 26.6 bits (56), Expect = 8.3
Identities = 17/65 (26%), Positives = 21/65 (32%)
Frame = -3
Query: 284 GCGNDGSRDDHWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFGFVNDNHGLRDNGIDTGSG 105
G DG W G NG G G N G +G + G G G G
Sbjct: 171 GGSQDGGSQGGWGGQNGGGQGGNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQGGWG 230
Query: 104 DNRGR 90
+ G+
Sbjct: 231 NQGGQ 235
>X59156-6|CAA41878.1| 160|Caenorhabditis elegans transposase
protein.
Length = 160
Score = 26.6 bits (56), Expect = 8.3
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 6/44 (13%)
Frame = -3
Query: 296 KSDSGCG----NDGSRDD--HWLGSNGSNVSNLDRLGDGAIDNN 183
KS GC DGS D+ H NGS S LD L I+N+
Sbjct: 61 KSFKGCALTIATDGSEDNQIHCFAPNGSIPSGLDLLNSTRIENS 104
>DQ384615-1|ABD34785.1| 492|Caenorhabditis elegans ERGIC-53-like
protein protein.
Length = 492
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 352 RAVMVDMSTLIDIQLRVSGRVTAGAGMMGVATITGLGATG 233
RA + + +DI L++ G+ GA +G+ + LGA G
Sbjct: 79 RAFLESENFQVDIALKIGGQGRVGADGLGIWYTSQLGALG 118
>AL132943-4|CAB81975.1| 690|Caenorhabditis elegans Hypothetical
protein Y116F11B.7 protein.
Length = 690
Score = 26.6 bits (56), Expect = 8.3
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 6/44 (13%)
Frame = -3
Query: 296 KSDSGCG----NDGSRDD--HWLGSNGSNVSNLDRLGDGAIDNN 183
KS GC DGS D+ H NGS S LD L I+N+
Sbjct: 619 KSFKGCALTIATDGSEDNQIHCFAPNGSIPSGLDLLNSTRIENS 662
>AF043698-2|AAB97559.3| 700|Caenorhabditis elegans Hypothetical
protein C54G6.2 protein.
Length = 700
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 254 HWLGSNGSNVSNLDRLGDGAIDNNHGLSNDFG 159
H +G NG LD L +G + + HG SN G
Sbjct: 379 HAIG-NGQGYEFLDTLFEGTVKHRHGNSNHHG 409
>AC006641-4|AAF39819.2| 477|Caenorhabditis elegans Hypothetical
protein F45D11.6 protein.
Length = 477
Score = 26.6 bits (56), Expect = 8.3
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 6/44 (13%)
Frame = -3
Query: 296 KSDSGCG----NDGSRDD--HWLGSNGSNVSNLDRLGDGAIDNN 183
KS GC DGS D+ H NGS S LD L I+N+
Sbjct: 406 KSFKGCALTIATDGSEDNQVHCFAPNGSIPSGLDLLNSTRIENS 449
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,670,277
Number of Sequences: 27780
Number of extensions: 147634
Number of successful extensions: 525
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -