Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16j09f
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY962814-1|AAX81435.1| 189|Caenorhabditis elegans calexcitin 2 ... 88 5e-18
Z36753-1|CAA85340.2| 193|Caenorhabditis elegans Hypothetical pr... 81 5e-16
U39997-1|AAA81096.1| 204|Caenorhabditis elegans Calexcitin prot... 72 3e-13
Z36753-2|CAE48510.1| 163|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 37 0.015
AF078783-5|AAC26922.1| 236|Caenorhabditis elegans Hypothetical ... 37 0.015
Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical pr... 35 0.046
Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical pr... 35 0.046
M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light ch... 35 0.046
M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light ch... 35 0.046
AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light ... 35 0.046
AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light ... 35 0.046
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 33 0.25
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 33 0.25
AC006661-6|AAF39889.1| 312|Caenorhabditis elegans Hypothetical ... 31 0.76
U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 31 1.00
L14433-5|AAA27976.2| 202|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z74036-5|CAA98489.3| 171|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 30 1.7
AY190131-1|AAO33925.1| 171|Caenorhabditis elegans CNB-1 protein. 30 1.7
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 30 1.7
AF357878-1|AAK27716.1| 589|Caenorhabditis elegans receptor-medi... 30 1.7
AF357877-1|AAK27715.1| 835|Caenorhabditis elegans receptor-medi... 30 1.7
AF357876-1|AAK27714.1| 576|Caenorhabditis elegans receptor-medi... 30 1.7
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 30 1.7
AC006695-15|AAO25981.1| 555|Caenorhabditis elegans Receptor med... 30 1.7
AC006695-14|AAK73902.2| 576|Caenorhabditis elegans Receptor med... 30 1.7
AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor med... 30 1.7
AC006695-12|AAL65796.1| 613|Caenorhabditis elegans Receptor med... 30 1.7
AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor med... 30 1.7
AC006695-10|AAF39980.1| 589|Caenorhabditis elegans Receptor med... 30 1.7
Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical p... 29 2.3
AF067608-16|AAC17657.2| 318|Caenorhabditis elegans Fk506-bindin... 29 2.3
Z78198-7|CAB01573.1| 622|Caenorhabditis elegans Hypothetical pr... 29 4.0
U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical pr... 28 7.0
AL132951-2|CAC44305.1| 561|Caenorhabditis elegans Hypothetical ... 28 7.0
AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical ... 28 7.0
Z81482-2|CAB03954.3| 377|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z74043-3|CAA98546.1| 125|Caenorhabditis elegans Hypothetical pr... 27 9.3
>AY962814-1|AAX81435.1| 189|Caenorhabditis elegans calexcitin 2
protein.
Length = 189
Score = 88.2 bits (209), Expect = 5e-18
Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 5/181 (2%)
Frame = +1
Query: 49 DFRKKKLLLVFQVFFDTDKSGTIEKSDFEKSAEGLAKARGWAPGSPALEVAKEHLTNIWN 228
+F + K F FFD D++G IE DF+ E + + RG S A+ L +IW
Sbjct: 10 EFLESKWKHAFTTFFDLDQNGLIEWKDFKDLIEVIGEVRGRR--SDFFMTARLCLPDIWQ 67
Query: 229 GLQKAADIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAEEY 408
+ +A + + IT +W+ L ++ WQ + + +F + D GD +D EY
Sbjct: 68 KMTEAIGKEEEDIITLSDWIQLCQSSRKSVREPAWQKAYVEYMFKLLDESGDHLVDQAEY 127
Query: 409 STVQQSFGIDKAQAVEAFKKMA---QGK--DVITWAEYQTLFKEYFTSDDPNALGNCILG 573
V FG+++ + F + A QG+ + I ++ L+K++F S+DP++ GN +LG
Sbjct: 128 VQVLGYFGVNRKDSSHCFDQFAFNHQGQLINSIDKKKFHVLWKQFFHSEDPSSPGNWLLG 187
Query: 574 Q 576
+
Sbjct: 188 K 188
>Z36753-1|CAA85340.2| 193|Caenorhabditis elegans Hypothetical
protein T09A5.1a protein.
Length = 193
Score = 81.4 bits (192), Expect = 5e-16
Identities = 52/185 (28%), Positives = 91/185 (49%), Gaps = 9/185 (4%)
Frame = +1
Query: 49 DFRKKKLLLVFQVFFDTDKSGTIEKSDFEKSAEGLAKARGWAPGSPALEVAKEHLTNIWN 228
+F + K F FFD D++G IE DF+ E + + RG S A+ L +IW
Sbjct: 10 EFLESKWKHAFTTFFDLDQNGLIEWKDFKDLIEVIGEVRG--RRSDFFMTARLCLPDIWQ 67
Query: 229 GLQKAADIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDS----GGDGAID 396
+ +A + + IT +W+ L ++ WQ + + +F + D GD +D
Sbjct: 68 KMTEAIGKEEEDIITLSDWIQLCQSSRKSVREPAWQKAYVEYMFKLLDESVSFSGDHLVD 127
Query: 397 AEEYSTVQQSFGIDKAQAVEAFKKMA---QGK--DVITWAEYQTLFKEYFTSDDPNALGN 561
EY V FG+++ + F + A QG+ + I ++ L+K++F S+DP++ GN
Sbjct: 128 QAEYVQVLGYFGVNRKDSSHCFDQFAFNHQGQLINSIDKKKFHVLWKQFFHSEDPSSPGN 187
Query: 562 CILGQ 576
+LG+
Sbjct: 188 WLLGK 192
>U39997-1|AAA81096.1| 204|Caenorhabditis elegans Calexcitin protein
1 protein.
Length = 204
Score = 72.1 bits (169), Expect = 3e-13
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 5/186 (2%)
Frame = +1
Query: 43 VSDFRKKKLLLVFQVFFDTDKSGTIEKSDFEKSAEGLAKARGWAPGSPALEVAKEHLTNI 222
V F KK +F +FFD + S ++ DF + + G S AK+ L +
Sbjct: 22 VDPFLVKKWERIFSLFFDRNASHQVDWGDFYLVVKKVRDIYG--AESVQTGFAKKSLAAL 79
Query: 223 WNGLQKAADIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAE 402
W GL AD D D I+ +EW+ L K T +W + +F + D DG +D
Sbjct: 80 WEGLCSIADADKDQLISIDEWIGLLKK-TDAKTEPKWFKDYQNFMFKLFDVSCDGVMDLA 138
Query: 403 EYSTVQQSFGIDKAQAVEAFKKMA---QGKDV--ITWAEYQTLFKEYFTSDDPNALGNCI 567
EY+ ++G D+++ AF K + +G+ V + + T F + F S + + +GN +
Sbjct: 139 EYTDGMSTYGFDQSECDAAFHKFSVDKKGQYVPQMKPETWNTYFHQLFYSTNKSDVGNHL 198
Query: 568 LGQSSF 585
G F
Sbjct: 199 FGIIDF 204
>Z36753-2|CAE48510.1| 163|Caenorhabditis elegans Hypothetical
protein T09A5.1b protein.
Length = 163
Score = 62.9 bits (146), Expect = 2e-10
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 4/146 (2%)
Frame = +1
Query: 49 DFRKKKLLLVFQVFFDTDKSGTIEKSDFEKSAEGLAKARGWAPGSPALEVAKEHLTNIWN 228
+F + K F FFD D++G IE DF+ E + + RG S A+ L +IW
Sbjct: 10 EFLESKWKHAFTTFFDLDQNGLIEWKDFKDLIEVIGEVRG--RRSDFFMTARLCLPDIWQ 67
Query: 229 GLQKAADIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDS----GGDGAID 396
+ +A + + IT +W+ L ++ WQ + + +F + D GD +D
Sbjct: 68 KMTEAIGKEEEDIITLSDWIQLCQSSRKSVREPAWQKAYVEYMFKLLDESVSFSGDHLVD 127
Query: 397 AEEYSTVQQSFGIDKAQAVEAFKKMA 474
EY V FG+++ + F + A
Sbjct: 128 QAEYVQVLGYFGVNRKDSSHCFDQFA 153
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/79 (31%), Positives = 44/79 (55%)
Frame = +1
Query: 244 ADIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAEEYSTVQQ 423
AD+DG+G I +E+L++ + Q P+E +++ + +F+V D GDG I ++ V
Sbjct: 52 ADLDGNGCIDIDEFLNVLRR--QICDPKEEREL--RDVFNVFDKNGDGVISIDDLIFVMC 107
Query: 424 SFGIDKAQAVEAFKKMAQG 480
G +K EA + + QG
Sbjct: 108 QLG-EKLTETEAKEMIKQG 125
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 36.7 bits (81), Expect = 0.015
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 5/173 (2%)
Frame = +1
Query: 40 MVSDFRKKKLLLVFQVF--FDTDKSGTIEKSDFEKSAEGLAKARGWAPGSPALEVAKEHL 213
++ + +++L QVF FD D+SG I + E + + L LE ++ L
Sbjct: 46 LLEGYSEEELQEYRQVFNMFDADRSGAIAIDELEAAIKNLG-----------LEQTRDEL 94
Query: 214 TNIWNGLQKAADIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAI 393
I + + D G+ +I +E+ + + T W +V K F V D +G I
Sbjct: 95 DKIIDEV----DQRGNHQIDFDEFCVVMRRL--TMKKSNWNEVV-KECFTVFDRSENGGI 147
Query: 394 DAEEYSTVQQSFG-IDKAQAV-EAFKKM-AQGKDVITWAEYQTLFKEYFTSDD 543
+++ + + G I Q + E F + G VI + E+ + K Y T DD
Sbjct: 148 SKKDFRFILRELGDITDNQIIDEIFNEADVDGNGVIDYDEFTYMVKNYMTDDD 200
>AF078783-5|AAC26922.1| 236|Caenorhabditis elegans Hypothetical
protein H10E21.4 protein.
Length = 236
Score = 36.7 bits (81), Expect = 0.015
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Frame = +1
Query: 193 EVAKEHLTNIWNGLQKAADIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQD 372
++ K++ I +G+ AD + DG++T E+ + A++ +P E Q L D
Sbjct: 108 KIRKDNNDRIIDGILSIADTNRDGQLTYAEFKNHLSSGAKSLSPAEEQRNQALQLLSFID 167
Query: 373 SGGDGAIDAEEYSTVQQSFG---IDKAQAVEAFKKMAQGKD-VITWAEYQTLFKEYFT 534
+ GD +D E T Q + K+ + F + + +D +T E L +++ T
Sbjct: 168 ANGDNKLDQLELYTFSQKTSTNKVTKSDVQQIFAMLDKNQDGYLTENELLQLAQQFST 225
>Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 35.1 bits (77), Expect = 0.046
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 349 KSLFHVQDSGGDGAIDAEEYSTVQQSFGIDKA-QAVEAFKKMAQGKDVITWAEYQTLFKE 525
K F++ D DG ID E+ + S G + Q +++ A G I + + TLF E
Sbjct: 33 KEAFNMIDQNRDGFIDQEDLKDMFASLGKEVTEQFIDSMINEAPGAQPINFTMFLTLFGE 92
Query: 526 YFTSDDP 546
T DP
Sbjct: 93 KLTGTDP 99
>Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 35.1 bits (77), Expect = 0.046
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 349 KSLFHVQDSGGDGAIDAEEYSTVQQSFGIDKA-QAVEAFKKMAQGKDVITWAEYQTLFKE 525
K F++ D DG ID E+ + S G + Q +++ A G I + + TLF E
Sbjct: 33 KEAFNMIDQNRDGFIDQEDLKDMFASLGKEVTEQFIDSMINEAPGAQPINFTMFLTLFGE 92
Query: 526 YFTSDDP 546
T DP
Sbjct: 93 KLTGTDP 99
>M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light chain
2 protein.
Length = 170
Score = 35.1 bits (77), Expect = 0.046
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 349 KSLFHVQDSGGDGAIDAEEYSTVQQSFG-IDKAQAVEAFKKMAQGKDVITWAEYQTLFKE 525
K F + D DG ID + + S G I ++A K A G I + + TLF E
Sbjct: 30 KEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP--INFTVFLTLFGE 87
Query: 526 YFTSDDPNA 552
T DP A
Sbjct: 88 RLTGTDPEA 96
>M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light chain
1 protein.
Length = 170
Score = 35.1 bits (77), Expect = 0.046
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 349 KSLFHVQDSGGDGAIDAEEYSTVQQSFG-IDKAQAVEAFKKMAQGKDVITWAEYQTLFKE 525
K F + D DG ID + + S G I ++A K A G I + + TLF E
Sbjct: 30 KEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP--INFTVFLTLFGE 87
Query: 526 YFTSDDPNA 552
T DP A
Sbjct: 88 RLTGTDPEA 96
>AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light
chain protein 1 protein.
Length = 170
Score = 35.1 bits (77), Expect = 0.046
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 349 KSLFHVQDSGGDGAIDAEEYSTVQQSFG-IDKAQAVEAFKKMAQGKDVITWAEYQTLFKE 525
K F + D DG ID + + S G I ++A K A G I + + TLF E
Sbjct: 30 KEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP--INFTVFLTLFGE 87
Query: 526 YFTSDDPNA 552
T DP A
Sbjct: 88 RLTGTDPEA 96
>AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light
chain protein 2 protein.
Length = 170
Score = 35.1 bits (77), Expect = 0.046
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 349 KSLFHVQDSGGDGAIDAEEYSTVQQSFG-IDKAQAVEAFKKMAQGKDVITWAEYQTLFKE 525
K F + D DG ID + + S G I ++A K A G I + + TLF E
Sbjct: 30 KEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGP--INFTVFLTLFGE 87
Query: 526 YFTSDDPNA 552
T DP A
Sbjct: 88 RLTGTDPEA 96
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 247 DIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAEEYSTV 417
D DGDG IT +E ++ Q T E QD + + D+ G+G ID E+ T+
Sbjct: 21 DKDGDGTITTKELGTVMRSLGQNPTEAELQD-----MINEVDADGNGTIDFPEFLTM 72
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 247 DIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAEEYSTV 417
D DGDG IT +E ++ Q T E QD + + D+ G+G ID E+ T+
Sbjct: 21 DKDGDGTITTKELGTVMRSLGQNPTEAELQD-----MINEVDADGNGTIDFPEFLTM 72
>AC006661-6|AAF39889.1| 312|Caenorhabditis elegans Hypothetical
protein H20J04.3 protein.
Length = 312
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +1
Query: 205 EHLTNIWNGLQKAADIDGDGKITQEEWLSLWDKYAQTSTPQEW 333
E+ +W L DGD ++ W L DKY + Q++
Sbjct: 32 EYKNRVWQRLVTVLGFDGDPRMLSARWKQLRDKYGKEKRKQKY 74
>U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 2 protein.
Length = 156
Score = 30.7 bits (66), Expect = 1.00
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 247 DIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAEEY 408
D+DGDG IT+ E + + + + + Q+ K+++ D DG I+ +E+
Sbjct: 100 DVDGDGYITRSELRTAFQRMGHSLSDQD-----IKAIYRHVDQNNDGKINFQEF 148
>L14433-5|AAA27976.2| 202|Caenorhabditis elegans Hypothetical
protein C50C3.5 protein.
Length = 202
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +1
Query: 193 EVAKEHLTNIWNGLQKAADIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQD 372
EV+K+ + ++ Q D DG G I+ E + ++ +P+ Q V S D
Sbjct: 43 EVSKQEVEKVFKIFQLMDD-DGSGTISSSEVAKMLNELGIDVSPKVVQAVMRSS-----D 96
Query: 373 SGGDGAIDAEEY 408
GDG ID EE+
Sbjct: 97 VSGDGQIDFEEF 108
>Z74036-5|CAA98489.3| 171|Caenorhabditis elegans Hypothetical
protein F55C10.1 protein.
Length = 171
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 238 KAADIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAEEY 408
K D+DG G ++ EE++SL P+ Q+ + + + D G+G +D E+
Sbjct: 28 KKLDVDGSGSLSVEEFMSL---------PELQQNPLVQRVIDIFDEDGNGEVDFREF 75
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 247 DIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAEEYST 414
D DG+G IT +E+ +Y T ++ D + D GDG ID EE+++
Sbjct: 117 DRDGNGFITADEF-----RYFMTHMGDQFSDQEVDEIIAEIDIDGDGQIDYEEFAS 167
>AY190131-1|AAO33925.1| 171|Caenorhabditis elegans CNB-1 protein.
Length = 171
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 238 KAADIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAEEY 408
K D+DG G ++ EE++SL P+ Q+ + + + D G+G +D E+
Sbjct: 28 KKLDVDGSGSLSVEEFMSL---------PELQQNPLVQRVIDIFDEDGNGEVDFREF 75
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 247 DIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAEEYST 414
D DG+G IT +E+ +Y T ++ D + D GDG ID EE+++
Sbjct: 117 DRDGNGFITADEF-----RYFMTHMGDQFSDQEVDEIIAEIDIDGDGQIDYEEFAS 167
>AF357878-1|AAK27716.1| 589|Caenorhabditis elegans
receptor-mediated endocytosis 1isoform I protein.
Length = 589
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 118 EKSDFEKSAEGLAKARGWAPGSPALE-VAKEHLTN-IWNGLQKAADIDGDGKITQEEW 285
E++ + + E L G+ G A E + K L N + + K ADID DG++ +E+
Sbjct: 487 ERTTADSTFESLGPVNGYLSGRAAKEHMVKSKLPNSVLGKVWKLADIDKDGQLDADEF 544
>AF357877-1|AAK27715.1| 835|Caenorhabditis elegans
receptor-mediated endocytosis 1isoform II protein.
Length = 835
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 118 EKSDFEKSAEGLAKARGWAPGSPALE-VAKEHLTN-IWNGLQKAADIDGDGKITQEEW 285
E++ + + E L G+ G A E + K L N + + K ADID DG++ +E+
Sbjct: 733 ERTTADSTFESLGPVNGYLSGRAAKEHMVKSKLPNSVLGKVWKLADIDKDGQLDADEF 790
>AF357876-1|AAK27714.1| 576|Caenorhabditis elegans
receptor-mediated endocytosis 1isoform IV protein.
Length = 576
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 118 EKSDFEKSAEGLAKARGWAPGSPALE-VAKEHLTN-IWNGLQKAADIDGDGKITQEEW 285
E++ + + E L G+ G A E + K L N + + K ADID DG++ +E+
Sbjct: 474 ERTTADSTFESLGPVNGYLSGRAAKEHMVKSKLPNSVLGKVWKLADIDKDGQLDADEF 531
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +1
Query: 196 VAKEHLTNIWNGLQKA---ADIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHV 366
+A++HLT ++K D DGDG I+ E ++ T +E D +
Sbjct: 269 LARKHLTKTEEEIRKVFQDLDKDGDGFISVAELQAVMTNLQAWLTEEEIDDGIRSA---- 324
Query: 367 QDSGGDGAIDAEEYSTV 417
D GDG +D EE+ V
Sbjct: 325 -DISGDGLVDLEEFIDV 340
>AC006695-15|AAO25981.1| 555|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform f protein.
Length = 555
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 118 EKSDFEKSAEGLAKARGWAPGSPALE-VAKEHLTN-IWNGLQKAADIDGDGKITQEEW 285
E++ + + E L G+ G A E + K L N + + K ADID DG++ +E+
Sbjct: 453 ERTTADSTFESLGPVNGYLSGRAAKEHMVKSKLPNSVLGKVWKLADIDKDGQLDADEF 510
>AC006695-14|AAK73902.2| 576|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform d protein.
Length = 576
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 118 EKSDFEKSAEGLAKARGWAPGSPALE-VAKEHLTN-IWNGLQKAADIDGDGKITQEEW 285
E++ + + E L G+ G A E + K L N + + K ADID DG++ +E+
Sbjct: 474 ERTTADSTFESLGPVNGYLSGRAAKEHMVKSKLPNSVLGKVWKLADIDKDGQLDADEF 531
>AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform a protein.
Length = 786
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 118 EKSDFEKSAEGLAKARGWAPGSPALE-VAKEHLTN-IWNGLQKAADIDGDGKITQEEW 285
E++ + + E L G+ G A E + K L N + + K ADID DG++ +E+
Sbjct: 684 ERTTADSTFESLGPVNGYLSGRAAKEHMVKSKLPNSVLGKVWKLADIDKDGQLDADEF 741
>AC006695-12|AAL65796.1| 613|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform e protein.
Length = 613
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 118 EKSDFEKSAEGLAKARGWAPGSPALE-VAKEHLTN-IWNGLQKAADIDGDGKITQEEW 285
E++ + + E L G+ G A E + K L N + + K ADID DG++ +E+
Sbjct: 511 ERTTADSTFESLGPVNGYLSGRAAKEHMVKSKLPNSVLGKVWKLADIDKDGQLDADEF 568
>AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform b protein.
Length = 835
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 118 EKSDFEKSAEGLAKARGWAPGSPALE-VAKEHLTN-IWNGLQKAADIDGDGKITQEEW 285
E++ + + E L G+ G A E + K L N + + K ADID DG++ +E+
Sbjct: 733 ERTTADSTFESLGPVNGYLSGRAAKEHMVKSKLPNSVLGKVWKLADIDKDGQLDADEF 790
>AC006695-10|AAF39980.1| 589|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform c protein.
Length = 589
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 118 EKSDFEKSAEGLAKARGWAPGSPALE-VAKEHLTN-IWNGLQKAADIDGDGKITQEEW 285
E++ + + E L G+ G A E + K L N + + K ADID DG++ +E+
Sbjct: 487 ERTTADSTFESLGPVNGYLSGRAAKEHMVKSKLPNSVLGKVWKLADIDKDGQLDADEF 544
>Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical
protein K08E3.10 protein.
Length = 153
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 355 LFHVQDSGGDGAIDAEEYSTVQQSFGIDKAQAVEAFKKMAQGKDV-ITWAEYQTLFKE 525
+FH D+ GDG ID+++ T ++ ++ +A+ A A+ IT E+ ++K+
Sbjct: 13 VFHFHDTLGDGKIDSKQLPTALRAMMLNPTEALLAEVSKARTSGARITVEEFIPIYKK 70
>AF067608-16|AAC17657.2| 318|Caenorhabditis elegans Fk506-binding
protein family protein7 protein.
Length = 318
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 238 KAADIDGDGKITQEEWLSLWDK 303
K D++GDG +T+ EWL + D+
Sbjct: 237 KYFDVNGDGIVTEVEWLKIMDR 258
>Z78198-7|CAB01573.1| 622|Caenorhabditis elegans Hypothetical
protein F55C5.8 protein.
Length = 622
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 187 ALEVAKEHLTNIWNGLQKAADIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHV 366
A + E +T W G + D D K +EW + AQ TP+E +F K+
Sbjct: 259 ASATSAEVVTIEWGGAKSTVD-DEKAKQVVQEWKQTEVELAQCQTPKEKMALFEKATADT 317
Query: 367 QDS 375
+D+
Sbjct: 318 RDA 320
>U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical
protein F43C9.2 protein.
Length = 159
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 247 DIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAEEYSTVQQ 423
D DGDG IT++E + + A D +F D GDG I E+ + Q
Sbjct: 105 DSDGDGAITEDEMAEILRRTADLGDRAAISD-----MFKATDLNGDGKITFFEFVKMMQ 158
>AL132951-2|CAC44305.1| 561|Caenorhabditis elegans Hypothetical
protein Y67H2A.4a protein.
Length = 561
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 358 FHVQDSGGDGAIDAEEYSTVQQ 423
F + D G+GA+D EE++ VQQ
Sbjct: 307 FKIFDVDGNGALDKEEFTKVQQ 328
>AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical
protein F08B6.3 protein.
Length = 301
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +1
Query: 238 KAADIDGDGKITQEEWLSLWDKYAQTSTPQEWQDVFCKSLFHVQDSGGDGAIDAEEY 408
K AD D DGK+ EE S + V +D GDGAI+ +E+
Sbjct: 148 KQADEDNDGKLNLEELAS----FLNPEHHPHMHPVLIAVTLLEKDQNGDGAIEEKEF 200
>Z81482-2|CAB03954.3| 377|Caenorhabditis elegans Hypothetical
protein C40H5.3 protein.
Length = 377
Score = 27.5 bits (58), Expect = 9.3
Identities = 21/87 (24%), Positives = 38/87 (43%)
Frame = +1
Query: 70 LLVFQVFFDTDKSGTIEKSDFEKSAEGLAKARGWAPGSPALEVAKEHLTNIWNGLQKAAD 249
L + QV K G I + + + G+ + W PG P + KEH N NG +
Sbjct: 207 LALTQVCGQEGKPGEITFTTYWERVPGV-EFHIWFPGQPHADEQKEHFEN--NG-YRLTY 262
Query: 250 IDGDGKITQEEWLSLWDKYAQTSTPQE 330
+ G + + +++ +W K ++ E
Sbjct: 263 LCGYSEAGKGKYVGVWQKPVKSEAQYE 289
>Z74043-3|CAA98546.1| 125|Caenorhabditis elegans Hypothetical
protein T19B10.4b protein.
Length = 125
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 175 PGSPALEVAKEHLTNIWNGLQKAADIDGDGKITQEEWLSLWDK 303
PG P N +NG + +G GK T + L++WDK
Sbjct: 80 PGGPGFMGPPNGNMNFFNGQNRR---NGSGKDTMDHRLTMWDK 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,431,542
Number of Sequences: 27780
Number of extensions: 256236
Number of successful extensions: 875
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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