Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16j08f
(419 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 36 0.009
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 36 0.009
Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical pr... 32 0.14
Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical pr... 32 0.14
U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical pr... 31 0.25
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 30 0.58
AL132876-23|CAD92403.1| 210|Caenorhabditis elegans Hypothetical... 30 0.77
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 29 1.8
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 29 1.8
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 29 1.8
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 29 1.8
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 29 1.8
U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical pr... 29 1.8
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 29 1.8
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 29 1.8
Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical pr... 27 4.1
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 27 4.1
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 27 4.1
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 27 4.1
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 27 4.1
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 27 4.1
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 27 4.1
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 27 4.1
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 27 4.1
Z81539-2|CAB04390.1| 221|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 27 7.2
U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein ... 27 7.2
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 27 7.2
U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein. 27 7.2
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 27 7.2
U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile (un... 27 7.2
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 27 7.2
U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with ta... 27 7.2
U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with ta... 27 7.2
DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related ... 27 7.2
DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related ... 27 7.2
AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeti... 27 7.2
AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeti... 27 7.2
Z82270-1|CAB63203.1| 914|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical pr... 26 9.5
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 26 9.5
U56966-4|AAA98719.2| 906|Caenorhabditis elegans Ace(angiotensin... 26 9.5
U56966-3|AAU05584.1| 332|Caenorhabditis elegans Ace(angiotensin... 26 9.5
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 26 9.5
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 26 9.5
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 26 9.5
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 26 9.5
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 36.3 bits (80), Expect = 0.009
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 173 DPGKMFVGGLSWQTS 217
DPGKMF+GGLSWQT+
Sbjct: 43 DPGKMFIGGLSWQTT 57
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 36.3 bits (80), Expect = 0.009
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 173 DPGKMFVGGLSWQTS 217
DPGKMF+GGLSWQT+
Sbjct: 43 DPGKMFIGGLSWQTT 57
>Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical
protein F32B4.4b protein.
Length = 663
Score = 32.3 bits (70), Expect = 0.14
Identities = 25/60 (41%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +1
Query: 40 SGSRPRRVSLDRS---RSADRLAPRAGPEPHGDPEPGCGPK--PRR--GAQRPGEDVRRR 198
+ SR R+VS DRS R D PR P+ G P PRR GA+R E RRR
Sbjct: 290 TSSRRRQVSPDRSEQRRHRDEPPPRRAPQEQPSRRRGASPPEPPRRQEGARRSEEPERRR 349
>Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical
protein F32B4.4a protein.
Length = 771
Score = 32.3 bits (70), Expect = 0.14
Identities = 25/60 (41%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +1
Query: 40 SGSRPRRVSLDRS---RSADRLAPRAGPEPHGDPEPGCGPK--PRR--GAQRPGEDVRRR 198
+ SR R+VS DRS R D PR P+ G P PRR GA+R E RRR
Sbjct: 398 TSSRRRQVSPDRSEQRRHRDEPPPRRAPQEQPSRRRGASPPEPPRRQEGARRSEEPERRR 457
>U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical
protein B0507.3 protein.
Length = 432
Score = 31.5 bits (68), Expect = 0.25
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +2
Query: 110 APSPMETQNQD--VARSPAEVPN-DPGKMFVGGLSWQTSPGKSSKDISEEQR-KAARSL 274
AP PME Q+Q+ + +SPA P+ D V L+ +S+K +EQ+ KAA S+
Sbjct: 164 APVPMEIQSQEQPIKKSPAPTPSLDASNKPVAALASTPQQKESTKKTEKEQKEKAAPSV 222
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 30.3 bits (65), Expect = 0.58
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +2
Query: 2 ESRAGSR*CSRATPGAVPAAY---RSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPN 172
+SRA R + +P AY VV P S+R P+P+P + + R P E
Sbjct: 1575 DSRARERMENPLLARQIPRAYPYQNGNVVPPPPSSYRAPSPAPTSGDRRGLNRLPQESYT 1634
Query: 173 DPGKMFVGGLSWQTSPGKSSKD 238
+P S SP + + D
Sbjct: 1635 EPAVKNTKNNSEYLSPHRFNLD 1656
>AL132876-23|CAD92403.1| 210|Caenorhabditis elegans Hypothetical
protein Y105E8A.28 protein.
Length = 210
Score = 29.9 bits (64), Expect = 0.77
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 91 RLAPRAGPEPHGDPEPGCGPKPRRGAQRPGED 186
++AP AGP+P P P P+P A+R E+
Sbjct: 110 QVAPLAGPQPFVPPPPPPLPEPAAAAERNAEN 141
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 1.8
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = +1
Query: 37 DSGSRPRRVSLDRSRSADRLAPRAGPEPHGDPEPGCGPKPRRGAQRPGED 186
++GS P S+ A P P P G P G GP P A PG D
Sbjct: 159 EAGS-PGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPGPAGPAGPPGPD 207
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 1.8
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = +1
Query: 37 DSGSRPRRVSLDRSRSADRLAPRAGPEPHGDPEPGCGPKPRRGAQRPGED 186
++GS P S+ A P P P G P G GP P A PG D
Sbjct: 159 EAGS-PGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPGPAGPAGPPGPD 207
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 44 GAVPAAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPND 175
G VP + + ++P+ H P P PM+ Q R P++ P D
Sbjct: 508 GRVPP-HVEMTSLLPSAQHLGPPPYPMDQHLQQARRFPSQEPID 550
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 44 GAVPAAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPND 175
G VP + + ++P+ H P P PM+ Q R P++ P D
Sbjct: 534 GRVPP-HVEMTSLLPSAQHLGPPPYPMDQHLQQARRFPSQEPID 576
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 44 GAVPAAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPND 175
G VP + + ++P+ H P P PM+ Q R P++ P D
Sbjct: 508 GRVPP-HVEMTSLLPSAQHLGPPPYPMDQHLQQARRFPSQEPID 550
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 44 GAVPAAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPND 175
G VP + + ++P+ H P P PM+ Q R P++ P D
Sbjct: 534 GRVPP-HVEMTSLLPSAQHLGPPPYPMDQHLQQARRFPSQEPID 576
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 44 GAVPAAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPND 175
G VP + + ++P+ H P P PM+ Q R P++ P D
Sbjct: 375 GRVPP-HVEMTSLLPSAQHLGPPPYPMDQHLQQARRFPSQEPID 417
>U39996-6|AAA81092.1| 595|Caenorhabditis elegans Hypothetical
protein C56E6.5 protein.
Length = 595
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -1
Query: 392 FIGSVRFSEKSRRSHFHFVSVGKFCPRNINPTA 294
F G V +S + R HF G CP N NP A
Sbjct: 230 FYGEVAYSGQMRLLPNHFKKAGFECPPNENPAA 262
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 44 GAVPAAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPND 175
G VP + + ++P+ H P P PM+ Q R P++ P D
Sbjct: 508 GRVPP-HVEMTSLLPSAQHLGPPPYPMDQHLQQARRFPSQEPID 550
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 44 GAVPAAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPND 175
G VP + + ++P+ H P P PM+ Q R P++ P D
Sbjct: 534 GRVPP-HVEMTSLLPSAQHLGPPPYPMDQHLQQARRFPSQEPID 576
>Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical
protein F32A11.6 protein.
Length = 367
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 191 VGGLSWQTSPGKSSKDISEEQRKAARSLCGHVTEP 295
+GGL Q+SP KSS D S + A+ C T P
Sbjct: 247 MGGLEMQSSPMKSSSDSSHMRSPMAQMNC-ETTRP 280
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Frame = +1
Query: 112 PEPHGDPEPG---CGPKPRRGAQRPGEDV 189
P+ HG P PG GP PR+ PG V
Sbjct: 535 PQSHGSPHPGPQYQGPPPRKEFPTPGRFV 563
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 77 VVVPTGSHRV---PAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQ 211
VVVP V +P + DV+ SP+E D KMFVG + Q
Sbjct: 18 VVVPIAESTVINAKDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQ 65
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 77 VVVPTGSHRV---PAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQ 211
VVVP V +P + DV+ SP+E D KMFVG + Q
Sbjct: 18 VVVPIAESTVINAKDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQ 65
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 77 VVVPTGSHRV---PAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQ 211
VVVP V +P + DV+ SP+E D KMFVG + Q
Sbjct: 18 VVVPIAESTVINAKDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQ 65
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 77 VVVPTGSHRV---PAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQ 211
VVVP V +P + DV+ SP+E D KMFVG + Q
Sbjct: 18 VVVPIAESTVINAKDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQ 65
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 77 VVVPTGSHRV---PAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQ 211
VVVP V +P + DV+ SP+E D KMFVG + Q
Sbjct: 18 VVVPIAESTVINAKDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQ 65
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 77 VVVPTGSHRV---PAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQ 211
VVVP V +P + DV+ SP+E D KMFVG + Q
Sbjct: 18 VVVPIAESTVINAKDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQ 65
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 77 VVVPTGSHRV---PAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQ 211
VVVP V +P + DV+ SP+E D KMFVG + Q
Sbjct: 18 VVVPIAESTVINAKDTTPSTAADNDVSPSPSEPDTDAIKMFVGQIPRQ 65
>Z81539-2|CAB04390.1| 221|Caenorhabditis elegans Hypothetical
protein F46A8.4 protein.
Length = 221
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +1
Query: 37 DSGSRPRRVSLDRSRSADRLAPRAGPEPHGDPEPGCGPKPRRGAQRP 177
D+G R S S++ + R G H P P P+P R P
Sbjct: 22 DNGGRSHGFGSSSSDSSEDYSGRRGGGRHRPPRPPRPPRPSRPVSTP 68
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +1
Query: 34 SDSGSRPRRVSLDRSRSADRLAPR 105
S S S PRR S RSR+ DR PR
Sbjct: 407 SRSRSPPRRRSRSRSRTRDRRRPR 430
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical
protein C46C2.1b protein.
Length = 1677
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +2
Query: 68 SIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPNDP 178
S V VPT VP PS + QN +P N P
Sbjct: 816 SAAVPVPTTMIHVPKPSEIPVQNVATTAAPVAANNVP 852
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical
protein C46C2.1a protein.
Length = 1838
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +2
Query: 68 SIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPNDP 178
S V VPT VP PS + QN +P N P
Sbjct: 816 SAAVPVPTTMIHVPKPSEIPVQNVATTAAPVAANNVP 852
>U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein
protein.
Length = 413
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 100 PRAGPEPHGDPEPGCGPKPR 159
P PEP +PEP PKP+
Sbjct: 46 PEPEPEPEPEPEPEPEPKPK 65
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 100 PRAGPEPHGDPEPGCGPKPR 159
P PEP +PEP PKP+
Sbjct: 46 PEPEPEPEPEPEPEPEPKPK 65
>U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein.
Length = 436
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 100 PRAGPEPHGDPEPGCGPKPR 159
P PEP +PEP PKP+
Sbjct: 24 PEPEPEPEPEPEPEPEPKPK 43
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 100 PRAGPEPHGDPEPGCGPKPR 159
P PEP +PEP PKP+
Sbjct: 24 PEPEPEPEPEPEPEPEPKPK 43
>U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile
(unfertilizable) protein1 protein.
Length = 551
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = -3
Query: 249 SSEMSFDDLPGLVCQLSPPTNIFPGSLGTSAGLRATSWFWVSMGLGAGTRCE 94
+ ++ FDDL G+ P T++FP ++ T +G V M + + RC+
Sbjct: 99 TDKIRFDDLNGI-----PMTSLFPQNVSTCSGFGFACTGAVHMVIPSSKRCD 145
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 100 PRAGPEPHGDPEPGCGPKPR 159
P PEP +PEP PKP+
Sbjct: 46 PEPEPEPEPEPEPEPEPKPK 65
>U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform c protein.
Length = 413
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 100 PRAGPEPHGDPEPGCGPKPR 159
P PEP +PEP PKP+
Sbjct: 46 PEPEPEPEPEPEPEPEPKPK 65
>U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform b protein.
Length = 458
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 100 PRAGPEPHGDPEPGCGPKPR 159
P PEP +PEP PKP+
Sbjct: 46 PEPEPEPEPEPEPEPEPKPK 65
>DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related
alternative variant b protein.
Length = 482
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 29 SRATPGAVP--AAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPA 160
S+ TP P A RS ++ + VPAP+P + Q A PA
Sbjct: 321 SKLTPKIRPIATANRSSILRMNVVKPTVPAPAPADAQQNKAASRPA 366
>DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related
alternative variant a protein.
Length = 507
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 29 SRATPGAVP--AAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPA 160
S+ TP P A RS ++ + VPAP+P + Q A PA
Sbjct: 321 SKLTPKIRPIATANRSSILRMNVVKPTVPAPAPADAQQNKAASRPA 366
>AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform b
protein.
Length = 482
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 29 SRATPGAVP--AAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPA 160
S+ TP P A RS ++ + VPAP+P + Q A PA
Sbjct: 321 SKLTPKIRPIATANRSSILRMNVVKPTVPAPAPADAQQNKAASRPA 366
>AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform a
protein.
Length = 507
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 29 SRATPGAVP--AAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPA 160
S+ TP P A RS ++ + VPAP+P + Q A PA
Sbjct: 321 SKLTPKIRPIATANRSSILRMNVVKPTVPAPAPADAQQNKAASRPA 366
>Z82270-1|CAB63203.1| 914|Caenorhabditis elegans Hypothetical
protein F53H2.1 protein.
Length = 914
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 65 DTRRGRLPESLGCTTDYRHET 3
D +G ES+GC TD RH T
Sbjct: 542 DFLQGSSLESIGCLTDTRHST 562
>Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical
protein F36A2.9b protein.
Length = 565
Score = 26.2 bits (55), Expect = 9.5
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Frame = -3
Query: 324 ILSEKHQPHSGSVTWPQRDRAAFLCSSEMSFDDLPGL-VCQLSPPTNIFPGSLGTSAGLR 148
I EKHQP +G + DR F C + + L G V +SP ++G + L
Sbjct: 106 IKPEKHQPVAGVINSAFNDRKTFSC-PRIKTELLTGTNVGNISPEDITIIAAMGDA--LA 162
Query: 147 ATSWFWVSMGLGAGTRCEPVGTTTTIERYAAGTAPGVAR 31
W + + P+G +TI+ T P + R
Sbjct: 163 TGIGLWPNADIEFRGASFPIGGDSTIDGLI--TIPNILR 199
>Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical
protein F36A2.9a protein.
Length = 528
Score = 26.2 bits (55), Expect = 9.5
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Frame = -3
Query: 324 ILSEKHQPHSGSVTWPQRDRAAFLCSSEMSFDDLPGL-VCQLSPPTNIFPGSLGTSAGLR 148
I EKHQP +G + DR F C + + L G V +SP ++G + L
Sbjct: 106 IKPEKHQPVAGVINSAFNDRKTFSC-PRIKTELLTGTNVGNISPEDITIIAAMGDA--LA 162
Query: 147 ATSWFWVSMGLGAGTRCEPVGTTTTIERYAAGTAPGVAR 31
W + + P+G +TI+ T P + R
Sbjct: 163 TGIGLWPNADIEFRGASFPIGGDSTIDGLI--TIPNILR 199
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 268 PRCFPLLLRDVFRRFTWTSLPAESSD 191
P F L VFR+ +W L E+ D
Sbjct: 585 PNLFSACLEHVFRKLSWIELKGEAED 610
>U56966-4|AAA98719.2| 906|Caenorhabditis elegans Ace(angiotensin
converting enzyme)-like non-peptidase protein 1, isoform
a protein.
Length = 906
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 34 SDSGSRPRRVSLDRSRSADRLAPRAGPEPHGDPEPGCGPKP 156
+D+ P+ S+ + P PEP +PEP P+P
Sbjct: 51 TDALDTPKNGSVPVPEPEPKPEPEPEPEPKPEPEPSPTPEP 91
>U56966-3|AAU05584.1| 332|Caenorhabditis elegans Ace(angiotensin
converting enzyme)-like non-peptidase protein 1, isoform
b protein.
Length = 332
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 34 SDSGSRPRRVSLDRSRSADRLAPRAGPEPHGDPEPGCGPKP 156
+D+ P+ S+ + P PEP +PEP P+P
Sbjct: 51 TDALDTPKNGSVPVPEPEPKPEPEPEPEPKPEPEPSPTPEP 91
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 26.2 bits (55), Expect = 9.5
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = +2
Query: 32 RATPGAVPAAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQ 211
RAT PAA + GSH + +PS Q P E P + K V L
Sbjct: 1192 RATTTNPPAAPVA-TAFTKIGSHIIISPSQKHKSTQTTDFGPKEAPKEAPKAVVETLEPD 1250
Query: 212 TS 217
TS
Sbjct: 1251 TS 1252
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 26.2 bits (55), Expect = 9.5
Identities = 20/62 (32%), Positives = 24/62 (38%)
Frame = +2
Query: 32 RATPGAVPAAYRSIVVVVPTGSHRVPAPSPMETQNQDVARSPAEVPNDPGKMFVGGLSWQ 211
RAT PAA + GSH + +PS Q P E P + K V L
Sbjct: 1190 RATTTNPPAAPVA-TAFTKIGSHIIISPSQKHKSTQTTDFGPKEAPKEAPKAVVETLEPD 1248
Query: 212 TS 217
TS
Sbjct: 1249 TS 1250
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 268 PRCFPLLLRDVFRRFTWTSLPAESSD 191
P F L VFR+ +W L E+ D
Sbjct: 756 PNLFSACLEHVFRKLSWIELKGEAED 781
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 268 PRCFPLLLRDVFRRFTWTSLPAESSD 191
P F L VFR+ +W L E+ D
Sbjct: 495 PNLFSACLEHVFRKLSWIELKGEAED 520
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,572,505
Number of Sequences: 27780
Number of extensions: 208559
Number of successful extensions: 1117
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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