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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16j04f
         (753 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar...   124   1e-29
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz...    58   2e-09
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo...    52   9e-08
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c...    49   8e-07
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c...    48   2e-06
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil...    44   2e-05
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha...    42   9e-05
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy...    40   4e-04
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats...    39   7e-04
SPAC823.10c |||mitochondrial carrier with solute carrier repeats...    35   0.014
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch...    34   0.019
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ...    33   0.033
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha...    33   0.033
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce...    30   0.41 
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2...    29   0.94 
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo...    26   5.0  
SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomy...    26   6.6  
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    26   6.6  
SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit |Sch...    26   6.6  

>SPBC530.10c |anc1||adenine nucleotide carrier
           Anc1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 322

 Score =  124 bits (300), Expect = 1e-29
 Identities = 62/131 (47%), Positives = 84/131 (64%), Gaps = 1/131 (0%)
 Frame = +1

Query: 1   GLIGLYRGFGVSVQGIIIYRASYFGFYDTARG-MLPDPKNTPIVISWAIAQTVTTVAGII 177
           GL GLYRGFG SV GI++YR  YFG YDT +  +L  P     + S+ +   VTT +G+ 
Sbjct: 190 GLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVGPLEGNFLASFLLGWAVTTGSGVA 249

Query: 178 SYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFV 357
           SYP DT+RRRMMM SG A   + Y ++  C   I   EG  +FFKGA +N+LRG  GA V
Sbjct: 250 SYPLDTIRRRMMMTSGEA---VKYSSSFECGRQILAKEGARSFFKGAGANILRGVAGAGV 306

Query: 358 LVLYDEIKKVL 390
           L +YD+++ ++
Sbjct: 307 LSIYDQVQLLM 317



 Score = 27.5 bits (58), Expect = 2.2
 Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
 Frame = +1

Query: 100 LPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDIL---YKNTIHCW 270
           + + KN+     + +      V+   + P + V+  +  Q    ++  L   YK    C+
Sbjct: 19  ITETKNSTFFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECF 78

Query: 271 ATIAKTEGTSAFFKGAFSNVLR 336
              A  EG  + ++G  +NVLR
Sbjct: 79  KRTAAEEGVISLWRGNTANVLR 100


>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 298

 Score = 57.6 bits (133), Expect = 2e-09
 Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
 Frame = +1

Query: 4   LIGLYRGFGVSVQGIIIYRASYFGFYDTARGML-PDPKNTPIVISWAIAQTVTTVAG-II 177
           ++ LY GF  ++   +++ A YFG     R  L P       + +  IA T+  + G  +
Sbjct: 157 ILALYNGFEATMWRHVVWNAGYFGVIQKIRNSLTPASSRIGEIRNNLIAGTIGGIFGTFL 216

Query: 178 SYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAF 354
           S PFD ++ R+      A     Y        T+A+ EG +A +KG    VLR G GG  
Sbjct: 217 STPFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGFVPKVLRLGPGGGI 276

Query: 355 VLVLYDEI 378
           +LV+++ +
Sbjct: 277 LLVVFNSV 284



 Score = 38.7 bits (86), Expect = 9e-04
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = +1

Query: 115 NTPIVISWAIAQTVTTVAGIIS-YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTE 291
           N P  +++A A  V  ++ +++ YP D V+ RM +  G  KSD  Y  T  C   I K E
Sbjct: 5   NIPFPVTFA-AGAVAGISEVLTLYPLDVVKTRMQLSVG--KSD--YNGTFDCLKKIVKNE 59

Query: 292 GTSAFFKGAFSNVL 333
           G    ++G    +L
Sbjct: 60  GPHRLYRGILPPIL 73


>SPAC19G12.05 |||mitochondrial citrate
           transporter|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 291

 Score = 52.0 bits (119), Expect = 9e-08
 Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
 Frame = +1

Query: 1   GLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIIS 180
           G+ GLYRG   +V          F  Y++ +  L         +S      V +VAGII+
Sbjct: 158 GIRGLYRGLAATVARQAANSGVRFTAYNSIKQSLQSRLPPDEKLSTVTTFLVGSVAGIIT 217

Query: 181 Y----PFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTG 345
                P DTV+ RM  QS  A  +  YKN+IHC   I   +G   F+ GA   + R    
Sbjct: 218 VYCTQPIDTVKSRM--QSLSASKE--YKNSIHCAYKILTQDGLLRFWSGATPRLARLILS 273

Query: 346 GAFVLVLYDEIKKVL 390
           G  V  +Y+++ ++L
Sbjct: 274 GGIVFTVYEKVMEIL 288


>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 320

 Score = 48.8 bits (111), Expect = 8e-07
 Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 8/138 (5%)
 Frame = +1

Query: 1   GLIGLYRGFGVSVQGIIIYRASYFGFYDTARG-----MLPDPKNTPIVISWAIAQTVTTV 165
           G+ GL RG G +    I       GFY+  R       L DPK   + I+ A        
Sbjct: 82  GIRGLQRGLGTAYVYQICLNGCRLGFYEPIRRTLNTWFLDDPKGNKLAINVASGAGSGLC 141

Query: 166 AGIISYPFDTVRRRMMMQSGR--AKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRG 339
             +   PF  V+ RM   S +        YK+  + ++ I K  G    F GA + +LR 
Sbjct: 142 GALFGSPFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVGADAAILRT 201

Query: 340 TGGAFV-LVLYDEIKKVL 390
             G+ V L +Y+  K+++
Sbjct: 202 VSGSSVQLPIYNWAKRMI 219



 Score = 33.1 bits (72), Expect = 0.044
 Identities = 20/50 (40%), Positives = 27/50 (54%)
 Frame = +1

Query: 187 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 336
           FDTV  RM  Q    K+  LYKN I C     ++EG  A +KG  +++ R
Sbjct: 250 FDTVMTRMYNQ----KNKELYKNPIDCILKTIRSEGFFALYKGFGAHLAR 295


>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 303

 Score = 47.6 bits (108), Expect = 2e-06
 Identities = 27/103 (26%), Positives = 49/103 (47%)
 Frame = +1

Query: 1   GLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIIS 180
           G+  L+RG    + G     A YF   +  +  +    + P+  + A A  +T ++    
Sbjct: 73  GVYSLWRGISSVIMGAGPSHAIYFSVLEFFKSKINASPDRPLASALAGACAIT-ISDAFM 131

Query: 181 YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFF 309
            PFD +++RM + S +      YK+ +HC  T+ + EG  AF+
Sbjct: 132 TPFDVIKQRMQLPSRK------YKSALHCATTVFRNEGLGAFY 168


>SPBC12D12.05c |||mitochondrial carrier, calcium binding
           subfamily|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 426

 Score = 44.0 bits (99), Expect = 2e-05
 Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 12/142 (8%)
 Frame = +1

Query: 1   GLIGLYRGFGVSVQGIIIYRASYFGFYDTAR----GMLP-----DPKNT--PIVISWAIA 147
           G+ G YRG  V + G+  Y A+  G ++  +    G+L      DP++   P  +  A  
Sbjct: 283 GIRGYYRGVLVGILGMFPYSATDLGTFEGLKRTWIGILASRDNVDPQDVKLPNGLVMAFG 342

Query: 148 QTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSN 327
               +    I +P + +R R+  Q G +     Y   I C+    K EG    +KG   N
Sbjct: 343 ALSGSTGATIVFPLNVIRTRLQTQ-GTSAHPATYDGFIDCFYKTTKNEGFRGLYKGLSPN 401

Query: 328 VLR-GTGGAFVLVLYDEIKKVL 390
           +L+     A   ++Y+  KK L
Sbjct: 402 LLKVAPSVAISYLVYENCKKWL 423


>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
           homolog|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 338

 Score = 41.9 bits (94), Expect = 9e-05
 Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 6/132 (4%)
 Frame = +1

Query: 10  GLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTV-AGIISYP 186
           GLY G    + G +   A +F  Y+  +  L    N P  + + +A  V  + A ++  P
Sbjct: 71  GLYSGVCPMLIGSLPATALFFSSYEYTKRHLMSNYNLPETLCFLLAGFVGDLFASVVYVP 130

Query: 187 FDTVRRRMMMQ----SGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTG-GA 351
            + ++ R+ +Q    +   +S+  Y +       IAK EG   FF G  + +LR      
Sbjct: 131 SEVLKTRLQLQGRYNNPHFQSNYNYPSFRGAVKQIAKQEGMKTFFYGYRATILRDIPFSG 190

Query: 352 FVLVLYDEIKKV 387
           F L+ Y+++++V
Sbjct: 191 FQLLFYEKLRQV 202


>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 361

 Score = 39.9 bits (89), Expect = 4e-04
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
 Frame = +1

Query: 1   GLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD-----PKNTPI-VISWAIAQTVTT 162
           G   L+RG G ++ G I  R+  F  Y   + +L D      +N+ I +++ AIA  +T+
Sbjct: 118 GTRALFRGLGPNLIGTIPARSINFFSYGNGKRILADLFNNGQENSQIHLMAAAIAGVITS 177

Query: 163 VAGIISYPFDTVRRRMMM--QSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 336
            A   + P   V+ R+ +  +SG+A     Y+++I C     + EG    +KG  +++L 
Sbjct: 178 AA---TNPIWLVKTRLQLDKKSGQAAQ---YRSSIDCIIKTIRLEGFRGLYKGLSASLLG 231

Query: 337 GTGGAFVLVLYDEIK 381
                   VLY++ K
Sbjct: 232 VGESTLQWVLYEKFK 246


>SPAC4G9.20c |||mitochondrial carrier with solute carrier
           repeats|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 302

 Score = 39.1 bits (87), Expect = 7e-04
 Identities = 18/48 (37%), Positives = 28/48 (58%)
 Frame = +1

Query: 172 IISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 315
           ++  PFD V+ R+  QS  +    +Y N + C   I+K EG +AF+KG
Sbjct: 33  LVGQPFDCVKVRLQSQSNVSP---IYNNALDCVKKISKNEGLAAFYKG 77


>SPAC823.10c |||mitochondrial carrier with solute carrier
           repeats|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 296

 Score = 34.7 bits (76), Expect = 0.014
 Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 13/125 (10%)
 Frame = +1

Query: 1   GLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLP---DPKNTPIVISWAI--AQTVTTV 165
           G+ G +RGFGV+      +   Y  FY+ ++  L    D  +    +   +     V  +
Sbjct: 156 GISGFFRGFGVTALRDAPHAGLYVYFYELSKQNLHKLFDRFSPSSSVQGTVPHRNIVNVM 215

Query: 166 AGIIS--------YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAF 321
           +G+IS         PFD ++ R+ ++        +YKN +H    +   EG   F  G F
Sbjct: 216 SGLISGATATAITNPFDMLKTRVQLEPH------IYKNFLHSAKLVYANEGFRGFLDGFF 269

Query: 322 SNVLR 336
             VLR
Sbjct: 270 LRVLR 274


>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 271

 Score = 34.3 bits (75), Expect = 0.019
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = +1

Query: 1   GLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTV-TTVAGII 177
           GL G YRG+ + V   +    S++  Y+ ++  L    N  I +   I   + T VA  I
Sbjct: 131 GLKGFYRGYWMGVAIYLPTTVSWWVCYEESKKYLQKQSNWDISVIAPICSALGTVVATTI 190

Query: 178 SYPFDTVRRRMMMQSGRA 231
           S P D V+ R  + +  A
Sbjct: 191 STPLDIVKTRYQVATSSA 208


>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 317

 Score = 33.5 bits (73), Expect = 0.033
 Identities = 25/112 (22%), Positives = 45/112 (40%)
 Frame = +1

Query: 1   GLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIIS 180
           G   LY G   ++  ++ Y +  F  ++  +       +        +      +   ++
Sbjct: 185 GYPALYNGLPATLLNVVPYVSICFFTFEFCKQKFFSNADLTAFQKLFLGGFTGIIGQTLT 244

Query: 181 YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 336
           +P D +RRR  +          YKN       I KTEG + FF+G  SN+L+
Sbjct: 245 FPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSSNMLK 295


>SPAC17H9.08 |||mitochondrial coenzyme A
           transporter|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 326

 Score = 33.5 bits (73), Expect = 0.033
 Identities = 33/117 (28%), Positives = 47/117 (40%), Gaps = 13/117 (11%)
 Frame = +1

Query: 4   LIGLYRGFGVSVQGIIIYRASYFGFYDTARGM---------LPDPKNTPIVISW--AIAQ 150
           +   YRGF V++ GI  Y    F  YD A            +   K+   + +W   +  
Sbjct: 184 ICNFYRGFSVTLTGIFPYAGMSFLAYDLATDFFHKQKIDEWVSTKKSDKKLKTWPELLCG 243

Query: 151 TVTTVAG-IISYPFDTVRRRMMMQSGRA-KSDILYKNTIHCWATIAKTEGTSAFFKG 315
               V G  +SYPF+  RR+M +   R  KS +  K  +    T  K  G   FF G
Sbjct: 244 AFAGVCGQTVSYPFEVCRRKMQIGGIRKNKSFLRLKQVVQ---TTYKEAGMRGFFVG 297



 Score = 31.5 bits (68), Expect = 0.13
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = +1

Query: 1   GLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML-PDPKNTPIVISWAIAQTVTTVAGII 177
           GL GLY+G   ++  +  Y    F  Y+  R +L  DP++      +       T +   
Sbjct: 74  GLHGLYQGHTATLYRVFPYAGIKFVAYEQVRRVLIRDPEHETHARRFLSGSLAGTCSVFF 133

Query: 178 SYPFDTVRRRMMMQSGRAKSDILYKNT 258
           +YP + +R R+   +   K+  L + T
Sbjct: 134 TYPLELIRVRLAYITNTGKNPTLTQVT 160


>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 371

 Score = 29.9 bits (64), Expect = 0.41
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 247 YKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 390
           Y NT   +  I K EG +AF++G F ++           LY+  K  L
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGIQFPLYEYFKSFL 277


>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 277

 Score = 28.7 bits (61), Expect = 0.94
 Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
 Frame = +1

Query: 13  LYRGFGVSVQGIIIYRASYFGFYDTARG--MLPDPKNTPIVISWAIAQTVTTVAGIISYP 186
           LY G  ++V G      +YF  YD ++   M   P N   +   ++ QT+ + +G     
Sbjct: 56  LYHGLSINVLGSAASWGAYFCIYDFSKRVVMSMTPFNNGEI---SVLQTLCS-SGFAGCI 111

Query: 187 FDTVRRRMMMQSGRAKSD-ILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLV 363
              +   + +   R  S  + Y N    +  + K EG    + G   ++L  + GA   +
Sbjct: 112 VAALTNPIWVVKSRILSKRVNYTNPFFGFYDLIKNEGLRGCYAGFAPSLLGVSQGALQFM 171

Query: 364 LYDEIK 381
            Y+++K
Sbjct: 172 AYEKLK 177


>SPBC1604.04 |||thiamine pyrophosphate
           transporter|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 314

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 15/69 (21%), Positives = 32/69 (46%)
 Frame = +1

Query: 1   GLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIIS 180
           G+  L+RG  V+    ++Y A+ F  +   + +  +       +++    +    A + S
Sbjct: 63  GVRALWRGNVVAELLYLVYGAAEFVAFSKLKHLTENLAMNDHAVNFLCGTSAGIFATLTS 122

Query: 181 YPFDTVRRR 207
           YP DT+R +
Sbjct: 123 YPLDTMRTK 131


>SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 327

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 94  GMLPDPKNTPIVISWAIAQTVTTV 165
           GMLPDPK+ P++        +T V
Sbjct: 89  GMLPDPKSIPVISQALTKYKITDV 112


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 365  KTSTKAPPVPLRTLEKAPL 309
            K S+KAPPVPL + +  P+
Sbjct: 1016 KLSSKAPPVPLPSADAPPI 1034


>SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 319

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = +1

Query: 28  GVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAG 171
           G+ + G+I+     +  Y+T R M+P     P  +S +     T+  G
Sbjct: 12  GIPICGVILLILWGYSLYNTLRFMVPGKATEPFTLSLSDVSDDTSAPG 59


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,654,366
Number of Sequences: 5004
Number of extensions: 48247
Number of successful extensions: 160
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 153
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 359287726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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