Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16j02f
         (768 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    49   5e-08
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   2.4  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   3.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   3.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   4.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   4.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.5  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 48.8 bits (111), Expect = 5e-08
 Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
 Frame = +1

Query: 82  AIYLLFNRNYQYWEKRGVPYEKPFFLFGSLS--FILRKSFWDYFYELSKRHTGD-YVGIF 252
           A+Y      + +W+ RGV   KP   FG+     +++KS   +  ++ +++  +  VG++
Sbjct: 17  ALYYYLTSTFDFWKSRGVVGPKPVPFFGTTKDLILVKKSTAHFVKDIYEKYKNEPMVGLY 76

Query: 253 LGFKPTLMVQTPEIARRILVKDNAHFNNR 339
               P L++  PE+ + IL++D + F NR
Sbjct: 77  ATRSPFLLLNDPELIKDILIRDFSKFANR 105


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -1

Query: 240 IVTRMPLA*FVEIVPKAFPQDKRQTSEQ 157
           ++  MP A +V+I    +PQ+ ++ SE+
Sbjct: 162 LIFAMPFATYVDINYVEYPQNSKRNSEE 189


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 586 YRLSENNEHTIYYIIHKQSINKY 518
           Y + +     +YY +HKQ + +Y
Sbjct: 250 YHMPKEIRGQLYYFLHKQLMTRY 272


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 586 YRLSENNEHTIYYIIHKQSINKY 518
           Y + +     +YY +HKQ + +Y
Sbjct: 250 YHMPKEIRGQLYYFLHKQLMTRY 272


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 466  IFRSHLYWNKNLSVIYIKIQYLPL 395
            + R H++ +    ++Y  IQY P+
Sbjct: 1516 VLRLHVWPDNGCPILYFTIQYRPI 1539


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 466  IFRSHLYWNKNLSVIYIKIQYLPL 395
            + R H++ +    ++Y  IQY P+
Sbjct: 1512 VLRLHVWPDNGCPILYFTIQYRPI 1535


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 553 YYIIHKQSINKY 518
           Y+ +HKQ +N+Y
Sbjct: 258 YFFLHKQVLNRY 269


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 553 YYIIHKQSINKY 518
           Y+ +HKQ +N+Y
Sbjct: 258 YFFLHKQVLNRY 269


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = -3

Query: 604 SNFIYMYR--LSENNEHTIYYIIHKQSINKYIKCTYVREC 491
           +N +Y+Y+  +S NN+ T +    K +I++  +    R C
Sbjct: 374 NNDVYLYQNTMSNNNQRTEWSATVKAAISEVQRVVLGRLC 413


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = -3

Query: 604 SNFIYMYR--LSENNEHTIYYIIHKQSINKYIKCTYVREC 491
           +N +Y+Y+  +S NN+ T +    K +I++  +    R C
Sbjct: 412 NNDVYLYQNTMSNNNQRTEWSATVKAAISEVQRVVLGRLC 451


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,384
Number of Sequences: 438
Number of extensions: 5786
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)