Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16i24f
         (682 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC007860-1|AAH07860.1|  198|Homo sapiens DENR protein protein.        171   1e-42
AF038554-1|AAC02985.2|  243|Homo sapiens density regulated prote...   171   1e-42
AB014731-1|BAB20268.1|  198|Homo sapiens SMAP-3 protein.              171   1e-42
AF103800-1|AAF02420.1|  150|Homo sapiens unknown protein.             132   1e-30

>BC007860-1|AAH07860.1|  198|Homo sapiens DENR protein protein.
          Length = 198

 Score =  171 bits (417), Expect = 1e-42
 Identities = 79/163 (48%), Positives = 104/163 (63%), Gaps = 10/163 (6%)
 Frame = +1

Query: 223 YPIKVQYCGNCSMPIEYCEYYPEYDKCKQWLEKNLPTEFEKVKLDXXXXXXXXXXXXXXX 402
           YP++V YCG CS+P EYCEY P+  KC+QWLEKN P EF K+ ++               
Sbjct: 27  YPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGISEGQGT 86

Query: 403 XXXXXMLK----------SKKKEDVPKLVQVSRAPRGKKKSVTVVSGLSTFDIDLKVAAK 552
                  K           +KK+ VP+ V +++ PR KKK VT V GL+TF+IDLK A +
Sbjct: 87  AGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDLKEAQR 146

Query: 553 FFGTKFACGSSVTGDDEIVIQGDVKDDLFDIIPEKWPEIDEDS 681
           FF  KF+CG+SVTG+DEI+IQGD  DD+ D+I EKWPE+D+DS
Sbjct: 147 FFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQEKWPEVDDDS 189


>AF038554-1|AAC02985.2|  243|Homo sapiens density regulated protein
           drp1 protein.
          Length = 243

 Score =  171 bits (417), Expect = 1e-42
 Identities = 79/163 (48%), Positives = 104/163 (63%), Gaps = 10/163 (6%)
 Frame = +1

Query: 223 YPIKVQYCGNCSMPIEYCEYYPEYDKCKQWLEKNLPTEFEKVKLDXXXXXXXXXXXXXXX 402
           YP++V YCG CS+P EYCEY P+  KC+QWLEKN P EF K+ ++               
Sbjct: 72  YPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGISEGQGT 131

Query: 403 XXXXXMLK----------SKKKEDVPKLVQVSRAPRGKKKSVTVVSGLSTFDIDLKVAAK 552
                  K           +KK+ VP+ V +++ PR KKK VT V GL+TF+IDLK A +
Sbjct: 132 AGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDLKEAQR 191

Query: 553 FFGTKFACGSSVTGDDEIVIQGDVKDDLFDIIPEKWPEIDEDS 681
           FF  KF+CG+SVTG+DEI+IQGD  DD+ D+I EKWPE+D+DS
Sbjct: 192 FFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQEKWPEVDDDS 234


>AB014731-1|BAB20268.1|  198|Homo sapiens SMAP-3 protein.
          Length = 198

 Score =  171 bits (417), Expect = 1e-42
 Identities = 79/163 (48%), Positives = 104/163 (63%), Gaps = 10/163 (6%)
 Frame = +1

Query: 223 YPIKVQYCGNCSMPIEYCEYYPEYDKCKQWLEKNLPTEFEKVKLDXXXXXXXXXXXXXXX 402
           YP++V YCG CS+P EYCEY P+  KC+QWLEKN P EF K+ ++               
Sbjct: 27  YPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGISEGQGT 86

Query: 403 XXXXXMLK----------SKKKEDVPKLVQVSRAPRGKKKSVTVVSGLSTFDIDLKVAAK 552
                  K           +KK+ VP+ V +++ PR KKK VT V GL+TF+IDLK A +
Sbjct: 87  AGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDLKEAQR 146

Query: 553 FFGTKFACGSSVTGDDEIVIQGDVKDDLFDIIPEKWPEIDEDS 681
           FF  KF+CG+SVTG+DEI+IQGD  DD+ D+I EKWPE+D+DS
Sbjct: 147 FFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQEKWPEVDDDS 189


>AF103800-1|AAF02420.1|  150|Homo sapiens unknown protein.
          Length = 150

 Score =  132 bits (319), Expect = 1e-30
 Identities = 64/138 (46%), Positives = 85/138 (61%), Gaps = 10/138 (7%)
 Frame = +1

Query: 298 KCKQWLEKNLPTEFEKVKLDXXXXXXXXXXXXXXXXXXXXMLK----------SKKKEDV 447
           KC+QWLEKN P EF K+ ++                      K           +KK+ V
Sbjct: 4   KCRQWLEKNFPNEFAKLTVENSPKQEAGISEGQGTAGEEEEKKKQKRGGRGQIKQKKKTV 63

Query: 448 PKLVQVSRAPRGKKKSVTVVSGLSTFDIDLKVAAKFFGTKFACGSSVTGDDEIVIQGDVK 627
           P+ V +++ PR KKK VT V GL+TF+IDLK A +FF  KF+CG+SVTG+DEI+IQGD  
Sbjct: 64  PQKVTIAKIPRAKKKYVTRVCGLATFEIDLKEAQRFFAQKFSCGASVTGEDEIIIQGDFT 123

Query: 628 DDLFDIIPEKWPEIDEDS 681
           DD+ D+I EKWPE+D+DS
Sbjct: 124 DDIIDVIQEKWPEVDDDS 141


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,317,719
Number of Sequences: 237096
Number of extensions: 1314415
Number of successful extensions: 6672
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6672
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)