Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16i21f
         (743 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0061 - 4812903-4812940,4813140-4813536                           29   5.2  
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485...    28   9.0  

>10_02_0061 - 4812903-4812940,4813140-4813536
          Length = 144

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = +3

Query: 69  WRWRPWSW---QKSPSNSTTTSRSVSPGPRVLDAPRKP 173
           WRWR W W    +  ++ST    S++ G R+L   R P
Sbjct: 41  WRWRQWWWLEATRRANSSTAVGGSMAVG-RLLPRSRSP 77


>05_03_0235 -
           10747649-10748118,10748226-10748314,10748477-10748574,
           10748934-10749046,10749107-10749200,10749557-10749589,
           10749734-10749851,10750110-10750210,10751036-10751233,
           10751337-10751471,10751752-10751830,10753650-10753738,
           10753835-10753987,10754100-10754285
          Length = 651

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 233 GGEHQRWRQNHPQSW 189
           GG HQR R +HP +W
Sbjct: 559 GGHHQRRRHHHPPAW 573


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,108,120
Number of Sequences: 37544
Number of extensions: 370949
Number of successful extensions: 1059
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)