Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16i20f
(758 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-3083|AAN11040.2| 581|Drosophila melanogaster CG31794-P... 59 7e-09
AE014134-3082|AAN11038.2| 581|Drosophila melanogaster CG31794-P... 59 7e-09
M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein ( D.me... 32 0.74
X95178-1|CAA64485.1| 693|Drosophila melanogaster caupolican hom... 32 0.98
BT021246-1|AAX33394.1| 693|Drosophila melanogaster RE64213p pro... 32 0.98
BT015986-1|AAV36871.1| 693|Drosophila melanogaster RE59515p pro... 32 0.98
AY122206-1|AAM52718.1| 325|Drosophila melanogaster LP03275p pro... 32 0.98
AE014296-2165|AAF49895.1| 693|Drosophila melanogaster CG10605-P... 32 0.98
M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase... 30 3.0
AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p pro... 30 3.0
AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA... 30 3.0
BT024949-1|ABE01179.1| 176|Drosophila melanogaster IP15852p pro... 29 6.9
BT023893-1|ABA81827.1| 294|Drosophila melanogaster LP21102p pro... 29 6.9
BT011136-1|AAR82803.1| 806|Drosophila melanogaster GM09007p pro... 29 6.9
AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p pro... 29 6.9
AY118695-1|AAM50555.1| 446|Drosophila melanogaster AT18493p pro... 29 6.9
AF041382-1|AAB96783.1| 1690|Drosophila melanogaster microtubule ... 29 6.9
AE014298-485|AAF45841.1| 294|Drosophila melanogaster CG14422-PA... 29 6.9
AE014296-1967|AAF50051.1| 566|Drosophila melanogaster CG11711-P... 29 6.9
AE014296-419|AAF47618.1| 446|Drosophila melanogaster CG15878-PA... 29 6.9
AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC... 29 6.9
AE014134-2836|ABI31320.1| 353|Drosophila melanogaster CG5020-PG... 29 6.9
AE014134-2835|ABI31321.1| 390|Drosophila melanogaster CG5020-PF... 29 6.9
AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD... 29 6.9
AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB... 29 6.9
AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA... 29 6.9
BT022156-1|AAY51551.1| 427|Drosophila melanogaster IP01408p pro... 29 9.1
AE014296-955|AAF50778.2| 1175|Drosophila melanogaster CG4835-PA ... 29 9.1
AE013599-4016|AAF47315.2| 427|Drosophila melanogaster CG3388-PA... 29 9.1
>AE014134-3083|AAN11040.2| 581|Drosophila melanogaster CG31794-PG,
isoform G protein.
Length = 581
Score = 58.8 bits (136), Expect = 7e-09
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +1
Query: 223 MDRTMYGKVLPGTYYPFRCAMKENGISPGYALLADLQNSINPG 351
MDRTMYGK+ PG P+R A + GI PGYALLADLQNS+ PG
Sbjct: 1 MDRTMYGKIDPGARQPYRTA-RSKGILPGYALLADLQNSV-PG 41
>AE014134-3082|AAN11038.2| 581|Drosophila melanogaster CG31794-PF,
isoform F protein.
Length = 581
Score = 58.8 bits (136), Expect = 7e-09
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +1
Query: 223 MDRTMYGKVLPGTYYPFRCAMKENGISPGYALLADLQNSINPG 351
MDRTMYGK+ PG P+R A + GI PGYALLADLQNS+ PG
Sbjct: 1 MDRTMYGKIDPGARQPYRTA-RSKGILPGYALLADLQNSV-PG 41
>M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein (
D.melanogaster RpII215gene encoding RNA polymerase II,
largest subunit, completecds. ).
Length = 1896
Score = 32.3 bits (70), Expect = 0.74
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +1
Query: 532 SSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYNVGQSPGYG-----RTG 696
SS P SPTY T+ +S T Y+ T S+YS +P Y+ SP + R G
Sbjct: 1837 SSTKYSPTSPTYTPTARNYSP--TSPMYSPTAPSHYSPTSPAYS-PSSPTFEESEDVRKG 1893
Query: 697 GRG 705
GRG
Sbjct: 1894 GRG 1896
>X95178-1|CAA64485.1| 693|Drosophila melanogaster caupolican
homeoprotein protein.
Length = 693
Score = 31.9 bits (69), Expect = 0.98
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +1
Query: 529 ISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYNVGQSPGYGRTGGRG 705
++S +S ++SS HS +TP S V YS GY G S G+G G G
Sbjct: 607 LNSSGGSSSSSGSSHSSSMHS--VTPVTVASMVNILYSNTDSGYGHGHSHGHGHGHGHG 663
>BT021246-1|AAX33394.1| 693|Drosophila melanogaster RE64213p
protein.
Length = 693
Score = 31.9 bits (69), Expect = 0.98
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +1
Query: 529 ISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYNVGQSPGYGRTGGRG 705
++S +S ++SS HS +TP S V YS GY G S G+G G G
Sbjct: 607 LNSSGGSSSSSGSSHSSSMHS--VTPVTVASMVNILYSNTDSGYGHGHSHGHGHGHGHG 663
>BT015986-1|AAV36871.1| 693|Drosophila melanogaster RE59515p
protein.
Length = 693
Score = 31.9 bits (69), Expect = 0.98
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +1
Query: 529 ISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYNVGQSPGYGRTGGRG 705
++S +S ++SS HS +TP S V YS GY G S G+G G G
Sbjct: 607 LNSSGGSSSSSGSSHSSSMHS--VTPVTVASMVNILYSNTDSGYGHGHSHGHGHGHGHG 663
>AY122206-1|AAM52718.1| 325|Drosophila melanogaster LP03275p
protein.
Length = 325
Score = 31.9 bits (69), Expect = 0.98
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +1
Query: 529 ISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYNVGQSPGYGRTGGRG 705
++S +S ++SS HS +TP S V YS GY G S G+G G G
Sbjct: 239 LNSSGGSSSSSGSSHSSSMHS--VTPVTVASMVNILYSNTDSGYGHGHSHGHGHGHGHG 295
>AE014296-2165|AAF49895.1| 693|Drosophila melanogaster CG10605-PA
protein.
Length = 693
Score = 31.9 bits (69), Expect = 0.98
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +1
Query: 529 ISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYNVGQSPGYGRTGGRG 705
++S +S ++SS HS +TP S V YS GY G S G+G G G
Sbjct: 607 LNSSGGSSSSSGSSHSSSMHS--VTPVTVASMVNILYSNTDSGYGHGHSHGHGHGHGHG 663
>M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase II
largest subunit protein.
Length = 408
Score = 30.3 bits (65), Expect = 3.0
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 532 SSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYN 663
SS P SPTY T+ +S T Y+ T S+YS +P Y+
Sbjct: 356 SSTKYSPTSPTYTPTARNYSP--TSPMYSPTAPSHYSPTSPAYS 397
>AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p protein.
Length = 1429
Score = 30.3 bits (65), Expect = 3.0
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 532 SSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYN 663
SS P SPTY T+ +S T Y+ T S+YS +P Y+
Sbjct: 1377 SSTKYSPTSPTYTPTARNYSP--TSPMYSPTAPSHYSPTSPAYS 1418
>AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA
protein.
Length = 1887
Score = 30.3 bits (65), Expect = 3.0
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 532 SSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYN 663
SS P SPTY T+ +S T Y+ T S+YS +P Y+
Sbjct: 1835 SSTKYSPTSPTYTPTARNYSP--TSPMYSPTAPSHYSPTSPAYS 1876
>BT024949-1|ABE01179.1| 176|Drosophila melanogaster IP15852p
protein.
Length = 176
Score = 29.1 bits (62), Expect = 6.9
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = +2
Query: 551 LLRQLTKTQAHSTQRR*LRTNIRVPSKATTVPTRPVTTWDNRQATAGPVVEGT*ASWTPY 730
L +Q + +A S Q+ N P ATT + P TT T GT + T
Sbjct: 61 LFKQPVQIEARSLQQLMSLKNPPCPPAATTTTSVPTTTTVTTSPTGPTTTTGTSTTTTTP 120
Query: 731 STT*AVPAT 757
+TT P T
Sbjct: 121 TTTSTNPTT 129
>BT023893-1|ABA81827.1| 294|Drosophila melanogaster LP21102p
protein.
Length = 294
Score = 29.1 bits (62), Expect = 6.9
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = +2
Query: 551 LLRQLTKTQAHSTQRR*LRTNIRVPSKATTVPTRPVTTWDNRQATAGPVVEGT*ASWTPY 730
L +Q + +A S Q+ N P ATT + P TT T GT + T
Sbjct: 40 LFKQPVQIEARSLQQLMSLKNPPCPPAATTTTSVPTTTTVTTSPTGPTTTTGTSTTTTTP 99
Query: 731 STT*AVPAT 757
+TT P T
Sbjct: 100 TTTSTNPTT 108
>BT011136-1|AAR82803.1| 806|Drosophila melanogaster GM09007p
protein.
Length = 806
Score = 29.1 bits (62), Expect = 6.9
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2
Query: 436 LEETQFCPGNWC 401
L ETQF PGNWC
Sbjct: 259 LGETQFAPGNWC 270
>AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p
protein.
Length = 1689
Score = 29.1 bits (62), Expect = 6.9
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2
Query: 436 LEETQFCPGNWC 401
L ETQF PGNWC
Sbjct: 259 LGETQFAPGNWC 270
>AY118695-1|AAM50555.1| 446|Drosophila melanogaster AT18493p
protein.
Length = 446
Score = 29.1 bits (62), Expect = 6.9
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 697 HRSCRSLAIVPRCNRACGYCSCFGRYSYICAESS 596
H+ C++LAI P + CG G YS + ESS
Sbjct: 188 HKQCKALAITP--DPMCGLFLHMGEYSMLMLESS 219
>AF041382-1|AAB96783.1| 1690|Drosophila melanogaster microtubule
binding protein D-CLIP-190 protein.
Length = 1690
Score = 29.1 bits (62), Expect = 6.9
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2
Query: 436 LEETQFCPGNWC 401
L ETQF PGNWC
Sbjct: 259 LGETQFAPGNWC 270
>AE014298-485|AAF45841.1| 294|Drosophila melanogaster CG14422-PA
protein.
Length = 294
Score = 29.1 bits (62), Expect = 6.9
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = +2
Query: 551 LLRQLTKTQAHSTQRR*LRTNIRVPSKATTVPTRPVTTWDNRQATAGPVVEGT*ASWTPY 730
L +Q + +A S Q+ N P ATT + P TT T GT + T
Sbjct: 40 LFKQPVQIEARSLQQLMSLKNPPCPPAATTTTSVPTTTTVTTSPTGPTTTTGTSTTTTTP 99
Query: 731 STT*AVPAT 757
+TT P T
Sbjct: 100 TTTSTNPTT 108
>AE014296-1967|AAF50051.1| 566|Drosophila melanogaster CG11711-PD,
isoform D protein.
Length = 566
Score = 29.1 bits (62), Expect = 6.9
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +1
Query: 550 PASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYNVGQSPGYGRTGGRGN 708
P +PT S + +T S H PG V + G+ GG+GN
Sbjct: 39 PQTPTASTPRPSSSHSSLSSTFAATFLHASSRHIPGRAVPRQNANGQNGGKGN 91
>AE014296-419|AAF47618.1| 446|Drosophila melanogaster CG15878-PA
protein.
Length = 446
Score = 29.1 bits (62), Expect = 6.9
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 697 HRSCRSLAIVPRCNRACGYCSCFGRYSYICAESS 596
H+ C++LAI P + CG G YS + ESS
Sbjct: 188 HKQCKALAITP--DPMCGLFLHMGEYSMLMLESS 219
>AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC,
isoform C protein.
Length = 1652
Score = 29.1 bits (62), Expect = 6.9
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2
Query: 436 LEETQFCPGNWC 401
L ETQF PGNWC
Sbjct: 221 LGETQFAPGNWC 232
>AE014134-2836|ABI31320.1| 353|Drosophila melanogaster CG5020-PG,
isoform G protein.
Length = 353
Score = 29.1 bits (62), Expect = 6.9
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2
Query: 436 LEETQFCPGNWC 401
L ETQF PGNWC
Sbjct: 192 LGETQFAPGNWC 203
>AE014134-2835|ABI31321.1| 390|Drosophila melanogaster CG5020-PF,
isoform F protein.
Length = 390
Score = 29.1 bits (62), Expect = 6.9
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2
Query: 436 LEETQFCPGNWC 401
L ETQF PGNWC
Sbjct: 192 LGETQFAPGNWC 203
>AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD,
isoform D protein.
Length = 1677
Score = 29.1 bits (62), Expect = 6.9
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2
Query: 436 LEETQFCPGNWC 401
L ETQF PGNWC
Sbjct: 246 LGETQFAPGNWC 257
>AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB,
isoform B protein.
Length = 1689
Score = 29.1 bits (62), Expect = 6.9
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2
Query: 436 LEETQFCPGNWC 401
L ETQF PGNWC
Sbjct: 259 LGETQFAPGNWC 270
>AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA,
isoform A protein.
Length = 1690
Score = 29.1 bits (62), Expect = 6.9
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2
Query: 436 LEETQFCPGNWC 401
L ETQF PGNWC
Sbjct: 259 LGETQFAPGNWC 270
>BT022156-1|AAY51551.1| 427|Drosophila melanogaster IP01408p
protein.
Length = 427
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +1
Query: 514 NGSRNISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYNVGQSPGYG 687
N ++ S + P+S Y+N +++ + +ST ++ + H+P Q PG G
Sbjct: 272 NMGMSLYSSQSWPSSGAYENHAAYGGSVASMSPASSTSGTSSAAHSPVQTQAQQPGTG 329
>AE014296-955|AAF50778.2| 1175|Drosophila melanogaster CG4835-PA
protein.
Length = 1175
Score = 28.7 bits (61), Expect = 9.1
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 566 TKTQAHSTQRR*LRTNIRVPS-KATTVPTRPVTTWDNRQATAGPVVEGT*ASWTPYSTT 739
T Q +T+ + T + + ++TTV T P TT +T E T S TP +TT
Sbjct: 1030 TTPQTTTTESTTISTTPKTTTTESTTVSTTPTTTESTTISTTPTTTEPTTVSTTPKTTT 1088
>AE013599-4016|AAF47315.2| 427|Drosophila melanogaster CG3388-PA
protein.
Length = 427
Score = 28.7 bits (61), Expect = 9.1
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +1
Query: 514 NGSRNISSDYAKPASPTYQNTSSFHSEKMTPHKYTSTVQSNYSTHTPGYNVGQSPGYG 687
N ++ S + P+S Y+N +++ + +ST ++ + H+P Q PG G
Sbjct: 272 NMGMSLYSSQSWPSSGAYENHAAYGGSVASMSPASSTSGTSSAAHSPVQTQAQQPGTG 329
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,029,805
Number of Sequences: 53049
Number of extensions: 642414
Number of successful extensions: 2607
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2604
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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