Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16h22f
(801 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49909-13|CAA90115.2| 215|Caenorhabditis elegans Hypothetical p... 146 2e-35
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p... 31 0.73
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical... 31 0.73
Z81509-2|CAB04155.1| 239|Caenorhabditis elegans Hypothetical pr... 31 0.96
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z82261-6|CAJ76925.1| 111|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z82261-5|CAH60756.1| 304|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical pr... 29 2.9
U80446-3|AAL77180.1| 889|Caenorhabditis elegans Nuclear pore co... 29 2.9
U80446-2|AAB37803.1| 1562|Caenorhabditis elegans Nuclear pore co... 29 2.9
U53335-7|AAA96172.2| 150|Caenorhabditis elegans Hypothetical pr... 29 2.9
U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d... 29 5.1
AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase... 29 5.1
AL023828-23|CAD56603.1| 294|Caenorhabditis elegans Hypothetical... 28 6.8
Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF000299-6|AAC47978.1| 297|Caenorhabditis elegans Hypothetical ... 28 8.9
>Z49909-13|CAA90115.2| 215|Caenorhabditis elegans Hypothetical
protein C14A4.11 protein.
Length = 215
Score = 146 bits (353), Expect = 2e-35
Identities = 80/178 (44%), Positives = 112/178 (62%), Gaps = 2/178 (1%)
Frame = +3
Query: 189 ASQTLRAALTKAEAAVPGLNYDLVAGIMRRADIPVNMNESLLRLQGSLTDSECTDLRLNR 368
A L ALT E A P YD ++ +++ VN+ ES LR+ + S DL ++
Sbjct: 37 ALNKLHTALTTCEQASPSFLYDFTKVLLDDSELSVNLQESYLRMHDT---SPTNDLIVSG 93
Query: 369 TEEA--FQELNKKSAALKKILSRIPDEITDRKTFLETIKEIASAIKKLLDAVNEVSTYTP 542
E+ ++EL K++ L+++LSR+P+E++DR FLETIK IAS+IKKLL+A+N V P
Sbjct: 94 YEQNADYKELTKRAIELRRVLSRVPEEMSDRHAFLETIKLIASSIKKLLEAINAVYRIVP 153
Query: 543 GPGKQVLEQRKREFVKYSKRFSTTLKEYFKEGQANAVFVSALYLIHQTNQILYTVKSK 716
+ +E+RKREFV YSKRFS TLK YFK+ AN V VSA L+ QT I+ T+ K
Sbjct: 154 LTAQPAVEKRKREFVHYSKRFSNTLKTYFKDQNANQVSVSANQLVFQTTMIVRTINEK 211
>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 31.5 bits (68), Expect = 0.73
Identities = 28/81 (34%), Positives = 37/81 (45%)
Frame = +3
Query: 306 SLLRLQGSLTDSECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETIKEI 485
SLLRL L D D+ TE A +L S K+L + + D+K K
Sbjct: 397 SLLRLSVDLNDDIRRDVVTGVTEVAKTKLEVIS---DKMLKACAERMKDKKP-----KVR 448
Query: 486 ASAIKKLLDAVNEVSTYTPGP 548
AIK+L+D N V T +P P
Sbjct: 449 IQAIKRLMDLYNHVMTSSPQP 469
>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 31.5 bits (68), Expect = 0.73
Identities = 28/81 (34%), Positives = 37/81 (45%)
Frame = +3
Query: 306 SLLRLQGSLTDSECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETIKEI 485
SLLRL L D D+ TE A +L S K+L + + D+K K
Sbjct: 397 SLLRLSVDLNDDIRRDVVTGVTEVAKTKLEVIS---DKMLKACAERMKDKKP-----KVR 448
Query: 486 ASAIKKLLDAVNEVSTYTPGP 548
AIK+L+D N V T +P P
Sbjct: 449 IQAIKRLMDLYNHVMTSSPQP 469
>Z81509-2|CAB04155.1| 239|Caenorhabditis elegans Hypothetical
protein F21A3.4 protein.
Length = 239
Score = 31.1 bits (67), Expect = 0.96
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +3
Query: 330 LTDSECTDLRLN--RTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETIKEIASAIKK 503
L + DL+L+ R EE + N KSA ++K++ + ++ +E K + KK
Sbjct: 143 LHKQQLKDLKLDCDREEEKCEYWNDKSAEIEKVVEMLKEQRKSLGERVEEEKRMEQEQKK 202
Query: 504 LLDAVNEVSTYTPGPGKQVLEQRKREFVKYS 596
+L+ + E+ G +Q+L++ +S
Sbjct: 203 MLEEL-EMLLKKTGKKRQILDENANLVASFS 232
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 30.3 bits (65), Expect = 1.7
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Frame = +3
Query: 288 PVNMNESLLRLQGSLTDSECTDLRLNR-TEEAFQELNKKSAALKKILSRIPD--EITD-- 452
P++ E L RLQ S E T + +NR E+ ++L S +K +S + D ++ D
Sbjct: 469 PIDEKEKLSRLQHSTHAFEATLIVMNRINEDNERKLGNISEQYEKKVSELGDLKKMLDEA 528
Query: 453 RKTFLETIKEIASAIKKLL-DAVNEVSTYTPGPGKQVLEQRK 575
RK F E ++++ ++ ++++ + N V + Q+ E+ K
Sbjct: 529 RKKFEEDVEQMKNSNQQVIRNHANAVESLQKTHETQIAEKNK 570
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 30.3 bits (65), Expect = 1.7
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Frame = +3
Query: 288 PVNMNESLLRLQGSLTDSECTDLRLNR-TEEAFQELNKKSAALKKILSRIPD--EITD-- 452
P++ E L RLQ S E T + +NR E+ ++L S +K +S + D ++ D
Sbjct: 537 PIDEKEKLSRLQHSTHAFEATLIVMNRINEDNERKLGNISEQYEKKVSELGDLKKMLDEA 596
Query: 453 RKTFLETIKEIASAIKKLL-DAVNEVSTYTPGPGKQVLEQRK 575
RK F E ++++ ++ ++++ + N V + Q+ E+ K
Sbjct: 597 RKKFEEDVEQMKNSNQQVIRNHANAVESLQKTHETQIAEKNK 638
>Z82261-6|CAJ76925.1| 111|Caenorhabditis elegans Hypothetical
protein C35D6.9b protein.
Length = 111
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 479 LDSLKKSLPISYLIWNATQYLFQSSRFLIKLLKCLF 372
L S+K+S P +++W A L F++ +L CL+
Sbjct: 11 LVSVKRSTPQRFILWQAITVLIFKFMFIVLVLTCLW 46
>Z82261-5|CAH60756.1| 304|Caenorhabditis elegans Hypothetical
protein C35D6.9a protein.
Length = 304
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 479 LDSLKKSLPISYLIWNATQYLFQSSRFLIKLLKCLF 372
L S+K+S P +++W A L F++ +L CL+
Sbjct: 204 LVSVKRSTPQRFILWQAITVLIFKFMFIVLVLTCLW 239
>Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical
protein F12F6.5 protein.
Length = 1059
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +3
Query: 423 LSRIPDEI-TDRKTFLETIKEIASAIKKLLDAVNEVSTYTPG-PGKQVLEQRKREFVKYS 596
L+R+ E+ T KT+ E+ +K A +V Y PGK +R R VKY
Sbjct: 185 LNRVLTELQTAMKTYQLCYAEMCGIERKKRSAEEDVKRYEDSNPGKYEGSRRHRSLVKYF 244
Query: 597 KR 602
KR
Sbjct: 245 KR 246
>U80446-3|AAL77180.1| 889|Caenorhabditis elegans Nuclear pore
complex protein protein6, isoform b protein.
Length = 889
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = -3
Query: 610 VENRFEYFTNSLFLCSNTCFPGPGVYVDTSFTASSNFFMAEAIS----LIVSRKVFRSVI 443
VEN ++Y ++ F+ T GP V + +F +S F ++ I +SV+
Sbjct: 718 VENAYDYDSDGRFINIKTALEGPIVKLAAAFVEASTFDNSKPFEDPHPQIFGGSFTQSVV 777
Query: 442 SSGMRLSI 419
S+ +R+S+
Sbjct: 778 SANIRVSV 785
>U80446-2|AAB37803.1| 1562|Caenorhabditis elegans Nuclear pore
complex protein protein6, isoform a protein.
Length = 1562
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = -3
Query: 610 VENRFEYFTNSLFLCSNTCFPGPGVYVDTSFTASSNFFMAEAIS----LIVSRKVFRSVI 443
VEN ++Y ++ F+ T GP V + +F +S F ++ I +SV+
Sbjct: 718 VENAYDYDSDGRFINIKTALEGPIVKLAAAFVEASTFDNSKPFEDPHPQIFGGSFTQSVV 777
Query: 442 SSGMRLSI 419
S+ +R+S+
Sbjct: 778 SANIRVSV 785
>U53335-7|AAA96172.2| 150|Caenorhabditis elegans Hypothetical
protein C55C3.2 protein.
Length = 150
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = -2
Query: 752 STSISIFHILLSLALYCIQYLICLMNQIKSAHKNSICLSFFKVFFECSRKSL*IFYKFSF 573
S SIS+F + + C+ +L+ L K K +S F K+ FYK SF
Sbjct: 69 SVSISVFRPAIIFLVTCLDFLVLLGLVYKKTCKPRGYMSLETTGFFVIDKN---FYKISF 125
Query: 572 PLF*YLLPRTWSICRYLI 519
+PRT S R+++
Sbjct: 126 NQKAINIPRTCSSLRFVV 143
>U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d
protein 1 protein.
Length = 1427
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 360 LNRTEEAFQELNKKSAALKKILSRIPDEITDR-KTFLETIKEIASAIKKLLDAVNEVSTY 536
L R + +E SA L + S P E+ D K + + + S I L + VNE +T
Sbjct: 263 LKRDSDGIEESKNTSAPLASVES--PGEVEDAFKKEVHMQQAVQSGI--LDETVNEANTS 318
Query: 537 TPGPGKQVLEQRKRE 581
P +Q +QRK++
Sbjct: 319 EGTPKRQRRQQRKKD 333
>AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase D
protein.
Length = 1427
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 360 LNRTEEAFQELNKKSAALKKILSRIPDEITDR-KTFLETIKEIASAIKKLLDAVNEVSTY 536
L R + +E SA L + S P E+ D K + + + S I L + VNE +T
Sbjct: 263 LKRDSDGIEESKNTSAPLASVES--PGEVEDAFKKEVHMQQAVQSGI--LDETVNEANTS 318
Query: 537 TPGPGKQVLEQRKRE 581
P +Q +QRK++
Sbjct: 319 EGTPKRQRRQQRKKD 333
>AL023828-23|CAD56603.1| 294|Caenorhabditis elegans Hypothetical
protein Y17G7B.20 protein.
Length = 294
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 339 SECTDLRLNRTE-EAFQEL-NKKSAALKKILSRIPDEITDRKTFLETIKEIASAI 497
+E + L+++ +E EA L +++A +KK L++ DEIT K ++ +IA +
Sbjct: 163 NEMSTLQMHNSELEAELRLAREENAKMKKALAKASDEITQLKKVIDQDSQIARVV 217
>Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical
protein K08F8.2 protein.
Length = 401
Score = 27.9 bits (59), Expect = 8.9
Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 2/153 (1%)
Frame = +3
Query: 117 PVTSLVLPVLIRPVLTQLEKYDLAASQTLRAALTKAEAAVPG-LNYDLVAGIMRRADIPV 293
P TSL++P + + + L AS L L +A + +P L + ++ +
Sbjct: 113 PPTSLIIPQVAKNLFPAGPIASLQASSMLTVPLLQAASHIPSMLQLCQLQPTTIQSPVYA 172
Query: 294 NMNESLLRLQGSL-TDSECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLE 470
+ + SL + S + R E+ Q+ S+ + KI R PD TD
Sbjct: 173 STQQPASTSASSLFSSSSSSAFHPFRPSESAQQSFPSSSVIVKIERRSPDSSTDVNMPQP 232
Query: 471 TIKEIASAIKKLLDAVNEVSTYTPGPGKQVLEQ 569
++ +S I+++ + TP P Q ++Q
Sbjct: 233 QLQPGSSVIQQI---GQPAPSGTPQPVIQAVQQ 262
>AF000299-6|AAC47978.1| 297|Caenorhabditis elegans Hypothetical
protein E03H12.2 protein.
Length = 297
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = -2
Query: 269 DSCHQIIIKTRYCSLCFG--ESCS*C 198
DSC + +K YC L FG SC+ C
Sbjct: 25 DSCINLCLKETYCMLAFGNDSSCTLC 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,320,893
Number of Sequences: 27780
Number of extensions: 360403
Number of successful extensions: 1044
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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