Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16h20r
         (847 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   4.7  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   6.2  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   6.2  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   8.2  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 808 FSLSGTLETVRGRGVVGQEPV 746
           + L+ T +  + RGVVG +PV
Sbjct: 20  YYLTSTFDFWKSRGVVGPKPV 40


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +3

Query: 684 PLGACRLTWLLYWKAGACLASTGSCPTT 767
           PL  CR+     W AGA   +   C  T
Sbjct: 81  PLYVCRVLHTTVWVAGAQRGNEQRCTVT 108



 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 766 VVGQEPVLARHAPAFQYSSHVSLQAPSGH 680
           +V   P  A+ A AF Y+ + S+    GH
Sbjct: 243 IVNNGPEAAKMAKAFTYTYNYSMYWGQGH 271


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 310 KTIIYGLKKNYDHKRKTTSY 251
           K + +G  K  DH RKT ++
Sbjct: 506 KLVDFGFAKRLDHGRKTWTF 525


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 201 SKLSENHSKIIVKKY 157
           SKLS + SK ++KKY
Sbjct: 15  SKLSSSDSKSLLKKY 29


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,766
Number of Sequences: 438
Number of extensions: 4186
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)