Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16h20f
         (761 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0103 - 12567986-12568141,12568307-12568442,12568751-125688...    29   3.1  
01_01_0941 - 7423284-7423366,7423479-7423749,7423844-7423913,742...    29   4.0  
07_03_1584 + 27907345-27907357,27907693-27908039,27908202-279083...    29   5.3  
05_07_0228 - 28526885-28527046,28527151-28527241,28528315-285284...    28   9.3  
03_04_0205 - 18485933-18488446                                         28   9.3  

>01_03_0103 - 12567986-12568141,12568307-12568442,12568751-12568824,
            12568932-12569175,12569480-12569766,12570618-12571103,
            12571348-12571459,12571540-12571745,12573071-12573276,
            12573831-12574162,12574284-12574825,12574967-12576308,
            12576386-12576457,12578438-12578505,12579011-12580174
          Length = 1808

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 709  SLCTSLSSNQGWFFFCHARRVSWA 638
            +LC S S NQ WF+F    R  WA
Sbjct: 1410 NLCASTSGNQPWFWFPSPDRNCWA 1433


>01_01_0941 -
           7423284-7423366,7423479-7423749,7423844-7423913,
           7424034-7424329,7426097-7426642
          Length = 421

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 186 KLESPKTSGKYDTGQLILHKVFGYRG 263
           KLE PK+  K   G  ++ ++FGYRG
Sbjct: 384 KLELPKSFSKIAFGNGLIRRLFGYRG 409


>07_03_1584 +
           27907345-27907357,27907693-27908039,27908202-27908319,
           27908653-27908705,27908808-27908978,27909447-27909643,
           27909729-27909807,27909954-27909992,27910202-27910321,
           27910417-27910518,27910654-27910737,27910832-27911074,
           27911156-27911281,27911365-27911439,27911534-27911605,
           27911807-27911926,27912075-27912172,27912643-27912802,
           27912867-27912980,27913029-27913121,27913122-27913319,
           27913404-27913497,27914032-27914192
          Length = 958

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +3

Query: 378 KEVKGRTHTFYQVLIDTRDAPYIRAQTEAVTFLGNQE-SSRSLYAI-PGLDYVAHDD 542
           +E  GR   FYQ +I + D P  R   E   F+  Q   + S++AI P  D +A  D
Sbjct: 825 EEDGGRRSRFYQTVIGSDDEPPSRCTPEVANFIVKQHFDAPSMWAIFPLQDLLALKD 881


>05_07_0228 -
           28526885-28527046,28527151-28527241,28528315-28528455,
           28528560-28528625,28529180-28529317,28529759-28529860,
           28530156-28530236,28530314-28530383,28530598-28530674,
           28531035-28531483
          Length = 458

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +3

Query: 594 DKFLMHNPDKDPPFIAQETLRAWQKKNHPWLELSDVHRETTEGV 725
           D ++  +P K  P +A  T  AW   N P   +SD+  + ++G+
Sbjct: 201 DLYIPRDPKKPSPVVAFVTGGAWIIGNFPQGTISDMVSDASDGI 244


>03_04_0205 - 18485933-18488446
          Length = 837

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +3

Query: 381 EVKGRTHTFYQVLIDTRDAPYIRAQTEAVTFLGNQESSRSLYAIPGLDYVAHD 539
           E+KG  H F    +D  D   I A  E +    N ++SR  Y IP ++ V HD
Sbjct: 709 EIKGEIHAFSVGSVDHPDMRVINAMLEWL----NLKTSREGY-IPDINVVLHD 756


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,927,074
Number of Sequences: 37544
Number of extensions: 455294
Number of successful extensions: 1116
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)