Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16h01f
(802 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0751 - 27769616-27769684,27769795-27769917,27769998-277707... 290 1e-78
02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,336... 287 5e-78
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663... 279 2e-75
02_05_0220 - 26885502-26885561,26885940-26886739,26887055-268874... 262 2e-70
06_03_1130 - 27826384-27827039,27827800-27828031,27828120-278284... 174 4e-55
01_03_0103 - 12567986-12568141,12568307-12568442,12568751-125688... 69 3e-12
06_01_0288 - 2106113-2109055 30 2.5
10_08_0867 + 21159931-21160075,21160288-21160409,21160539-211606... 29 4.3
05_07_0247 + 28643862-28644310,28645151-28645207,28645644-286489... 29 4.3
07_01_0539 - 3985623-3986653,3986752-3987046 29 5.7
12_02_1183 - 26764883-26765174,26765559-26765677 28 7.5
09_04_0609 - 18929600-18929646,18929753-18929924,18930304-189304... 28 7.5
04_03_0795 - 19704354-19704464,19705152-19705214,19705298-197053... 28 7.5
11_02_0105 - 8336309-8336392,8336514-8336579,8337279-8337431,833... 28 9.9
09_06_0186 + 21427739-21428813,21428894-21428977,21429136-21429254 28 9.9
01_01_0001 + 2449-2616,3357-3455,4457-4560,6136-6944,7028-7150,7... 28 9.9
>04_04_0751 - 27769616-27769684,27769795-27769917,27769998-27770770,
27771407-27771773,27772104-27772217,27772307-27772403,
27772968-27773088,27773168-27773252,27773349-27773498,
27773630-27773746,27773819-27773905,27773981-27774049,
27774125-27774181,27774266-27774349,27774477-27774513,
27774721-27774869,27776053-27776538,27776743-27776886,
27776961-27777509,27778332-27778526,27779226-27779310,
27779570-27779670,27779689-27780360,27781101-27781433,
27781957-27782038,27782258-27782334,27782713-27782817,
27783810-27783944,27784437-27785159,27785882-27786663,
27787480-27789187
Length = 2891
Score = 290 bits (711), Expect = 1e-78
Identities = 143/260 (55%), Positives = 181/260 (69%), Gaps = 5/260 (1%)
Frame = +3
Query: 3 ADRSKNDLTQYPVFPWIIADYTSETIDFTKPETFRDLSKPMGALNPDRLEKLKERFHEMT 182
A RS ND+TQYPVFPWIIADY SE ++ P T+RDLSKP+GALNP+RLEK +ER+
Sbjct: 2182 AGRSYNDITQYPVFPWIIADYRSEILNLDDPCTYRDLSKPIGALNPERLEKFQERYSTFE 2241
Query: 183 DP---KFLYGSHYSAPGLVLFYLVRKYPQYMLC--LQNGRFDHPDRMFNSMKDVFNNCLK 347
DP KF YGSHYS+ G VL+YL R P L LQ G+FDH DRMF+ + +++ L+
Sbjct: 2242 DPIIPKFHYGSHYSSAGTVLYYLFRVEPYTTLSIQLQGGKFDHADRMFSDLSGTWDSVLE 2301
Query: 348 NMSDFKELVPEFYDVEAKGDFLVNKFEIDFGSRHDGTKVNDVALPPWAKSPEDFVCKLRD 527
+MSD KELVPE + + + N IDFG+ G K++ V LPPWA+ P DFV K R
Sbjct: 2302 DMSDVKELVPEMFYLP---EVFTNINSIDFGTTQLGGKLDSVNLPPWAEDPVDFVHKHRK 2358
Query: 528 ALESNYVSKHIHLWIDLIFGYKQRGEEAIKAENVFHHVCYEGSVDLECIYDMNDRHALEV 707
ALES +VS H+H WIDLIFG+KQRG+EA+ A NVF ++ YEG+VD++ I D R A++
Sbjct: 2359 ALESEHVSAHLHEWIDLIFGFKQRGKEAVMANNVFFYITYEGTVDIDKITDPVQRQAMQD 2418
Query: 708 QIMEFGQVPKQLFTKPHVRR 767
QI FGQ P QL T PH+RR
Sbjct: 2419 QIAYFGQTPSQLLTIPHMRR 2438
>02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,
3366324-3366449,3367056-3367262,3367399-3367492,
3367575-3367621,3367705-3368157,3368261-3368560,
3368656-3369114,3369189-3369410,3369659-3369890,
3370051-3370422,3371210-3371322,3371682-3371903,
3371977-3372180,3372308-3372572,3373123-3373311,
3373441-3373768,3373843-3374248,3374339-3374648,
3375677-3375837,3376825-3376998,3377265-3377609,
3377713-3377754,3378585-3378734,3378847-3379002,
3379088-3379540,3379651-3379966,3380402-3380839,
3381475-3381697,3383538-3383852,3384033-3384095,
3384699-3384903,3385362-3385425,3386014-3386204
Length = 3048
Score = 287 bits (705), Expect = 5e-78
Identities = 142/271 (52%), Positives = 186/271 (68%), Gaps = 7/271 (2%)
Frame = +3
Query: 3 ADRSKNDLTQYPVFPWIIADYTSETIDFTKPETFRDLSKPMGALNPDRLEKLKERFHEMT 182
A RS NDLTQYP+FPWI++DY+SE IDF K +FRDLSKP+GAL+ R + +ER+
Sbjct: 2408 AGRSYNDLTQYPIFPWILSDYSSEKIDFNKSSSFRDLSKPVGALDAKRFKVFEERYLNFC 2467
Query: 183 DP---KFLYGSHYSAPGLVLFYLVRKYPQYMLC--LQNGRFDHPDRMFNSMKDVFNNCLK 347
DP F YGSHYS+ G+VL+YL+R P L LQ G+FDH DR+F S++ + NCL
Sbjct: 2468 DPDIPSFYYGSHYSSMGIVLYYLLRLEPFTALHRNLQGGKFDHADRLFQSIESTYRNCLS 2527
Query: 348 NMSDFKELVPEFYDVEAKGDFLVNKFEIDFGSRHDGTKVNDVALPPWAKS-PEDFVCKLR 524
N SD KEL+PEF+ + +FL N G + DG + +V LPPWAK PE+F+ R
Sbjct: 2528 NTSDVKELIPEFFYMP---EFLENSNSYHLGVKQDGEPLGNVGLPPWAKGCPEEFIHINR 2584
Query: 525 DALESNYVSKHIHLWIDLIFGYKQRGEEAIKAENVFHHVCYEGSVDLECIYDMNDRHALE 704
+ALES YVS ++H WIDLIFGYKQRG+ A++A N+F+++ YEG+VDLE + DM + A+E
Sbjct: 2585 EALESEYVSSNLHHWIDLIFGYKQRGKPAVEAANIFYYLTYEGAVDLENMDDMLQKSAIE 2644
Query: 705 VQIMEFGQVPKQLFTKPHVRRISP-QIAKPM 794
QI FGQ P Q+F K H RR P IA P+
Sbjct: 2645 DQIANFGQTPIQIFRKKHPRRGPPIPIAHPL 2675
>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
30366541-30366849,30367544-30370567,30370640-30372290,
30372373-30373463,30373544-30373646,30373737-30374439,
30374654-30375783,30375913-30376027,30376504-30376695,
30377443-30377616,30378438-30378494,30378581-30378716,
30378842-30378927,30379023-30379092,30379993-30380021,
30380444-30380456,30380762-30381006
Length = 3582
Score = 279 bits (683), Expect = 2e-75
Identities = 138/263 (52%), Positives = 179/263 (68%), Gaps = 8/263 (3%)
Frame = +3
Query: 3 ADRSKNDLTQYPVFPWIIADYTSETIDFTKPETFRDLSKPMGALNPDRLEKLKERFHEMT 182
A R +DLTQYPVFPW++ADY S+T+D P+TFR L KPMG E+ ++R+
Sbjct: 2989 AGRGYSDLTQYPVFPWVLADYESDTLDLRNPQTFRKLDKPMGCQTEGGEEEFRKRYDSWD 3048
Query: 183 DP---KFLYGSHYSAPGLVLFYLVRKYPQYM--LCLQNGRFDHPDRMFNSMKDVFNNCL- 344
DP KF YGSHYS+ G+VLFYL+R P M LQ G+FDH DR+FNS+KD + +
Sbjct: 3049 DPEVPKFHYGSHYSSAGIVLFYLLRLPPFSMENQKLQGGQFDHADRLFNSVKDTWVSAAG 3108
Query: 345 -KNMSDFKELVPEFYDVEAKGDFLVNKFEIDFGSRHDGTKVNDVALPPWAK-SPEDFVCK 518
N SD KEL+PEFY + +FL N+F +D G + G KV DV LPPWAK S +F+ K
Sbjct: 3109 KSNTSDVKELIPEFYYLP---EFLENQFNLDLGEKQSGEKVGDVVLPPWAKGSSREFIRK 3165
Query: 519 LRDALESNYVSKHIHLWIDLIFGYKQRGEEAIKAENVFHHVCYEGSVDLECIYDMNDRHA 698
R+ALES+YVS+++H WIDLIFGYKQRG+ A A NVF+H YEG+VD++ + D + +
Sbjct: 3166 HREALESDYVSENLHHWIDLIFGYKQRGKAAEDAVNVFYHYTYEGNVDIDSVSDPTMKAS 3225
Query: 699 LEVQIMEFGQVPKQLFTKPHVRR 767
+ QI FGQ PKQLF KPH +R
Sbjct: 3226 ILAQINHFGQTPKQLFQKPHPQR 3248
>02_05_0220 - 26885502-26885561,26885940-26886739,26887055-26887421,
26887942-26888055,26888132-26888228,26889115-26889235,
26889306-26889390,26889494-26889643,26889871-26889987,
26890123-26890221,26890439-26890495,26890581-26890664,
26890759-26890828,26891015-26891169,26891557-26892095,
26892327-26892393,26892436-26892984,26893574-26893768,
26894485-26894569,26895822-26896441,26897154-26897486,
26897552-26897616,26897868-26897955,26898250-26898331,
26898720-26898796,26899152-26899256,26899496-26899630,
26900199-26900888,26901474-26902261,26902990-26904673
Length = 2825
Score = 262 bits (643), Expect = 2e-70
Identities = 126/251 (50%), Positives = 169/251 (67%), Gaps = 5/251 (1%)
Frame = +3
Query: 30 QYPVFPWIIADYTSETIDFTKPETFRDLSKPMGALNPDRLEKLKER---FHEMTDPKFLY 200
QYPVFPW++ADY S+T+D P +RDLS+P+GALNP RL+K +E F++ T PKF Y
Sbjct: 2160 QYPVFPWVLADYHSKTLDLEDPSAYRDLSEPIGALNPARLKKFQEHYSSFNDPTIPKFHY 2219
Query: 201 GSHYSAPGLVLFYLVRKYPQYMLCLQN--GRFDHPDRMFNSMKDVFNNCLKNMSDFKELV 374
SHYS PG VL+YLVR P L +Q GRF D MF+ + +N+ L++M+D KELV
Sbjct: 2220 SSHYSCPGTVLYYLVRIEPFTALSIQQQGGRFGQDDHMFSCINKTWNSVLEDMNDVKELV 2279
Query: 375 PEFYDVEAKGDFLVNKFEIDFGSRHDGTKVNDVALPPWAKSPEDFVCKLRDALESNYVSK 554
PE + + + N +D GS K++ V LPPWA++P DF+CK R ALES+YVS
Sbjct: 2280 PEMFYLP---ELFTNVNSVDLGSTQLTGKLSSVQLPPWAENPVDFICKHRKALESDYVSA 2336
Query: 555 HIHLWIDLIFGYKQRGEEAIKAENVFHHVCYEGSVDLECIYDMNDRHALEVQIMEFGQVP 734
H+H WIDLIFG+KQRG++A+ A NVF + YEG VD++ I + R +++ QI FGQ P
Sbjct: 2337 HLHEWIDLIFGHKQRGKDAVMANNVFPYATYEGMVDIDQITNPVQRRSMQDQICNFGQTP 2396
Query: 735 KQLFTKPHVRR 767
QL T PH +R
Sbjct: 2397 SQLLTIPHTKR 2407
>06_03_1130 - 27826384-27827039,27827800-27828031,27828120-27828491,
27829243-27829449,27829611-27829704,27829806-27829870,
27829946-27830398,27830467-27830760,27830837-27831295,
27831367-27831588,27831755-27831968,27832039-27832494,
27833280-27833389,27833468-27833644,27833758-27833979,
27834048-27834167,27834274-27834383,27834552-27834607,
27835252-27835440,27835602-27835775,27836066-27836281,
27837066-27837106,27837971-27837986,27838330-27838415,
27838737-27838910,27839093-27839149,27839720-27840064,
27840175-27840216,27840377-27840496,27840575-27840724,
27840830-27841534,27841609-27841954,27842978-27843080,
27844817-27844860,27845905-27846101,27846322-27846344,
27846802-27847122,27847406-27847579,27847843-27848047,
27848817-27848880,27850097-27850278,27850291-27850350,
27850688-27850748,27851249-27851313,27851491-27851569,
27851656-27852021,27852442-27852790,27852887-27852989,
27853103-27853373,27854296-27854405,27854515-27854652
Length = 3364
Score = 174 bits (423), Expect(2) = 4e-55
Identities = 90/180 (50%), Positives = 111/180 (61%), Gaps = 11/180 (6%)
Frame = +3
Query: 3 ADRSKNDLTQYPVFPWIIADYTSETIDFTKPETFRDLSKPMGALNPDRLEK------LKE 164
A RS NDLTQYPVFPW++ DYTSE +DF K TFRDLSKP+GAL+ R E+ ++
Sbjct: 2774 AGRSYNDLTQYPVFPWVLTDYTSEKLDFNKSSTFRDLSKPIGALDEKRFEQYVIGQVFED 2833
Query: 165 RFHEMTD---PKFLYGSHYSAPGLVLFYLVRKYPQYML--CLQNGRFDHPDRMFNSMKDV 329
R+ D P F YGSHYS G+VL YL+R P L LQ G+FDH DR+F S+
Sbjct: 2834 RYVNFDDPDIPSFYYGSHYSTMGIVLHYLLRLEPFTTLHRSLQGGKFDHADRLFQSIDSA 2893
Query: 330 FNNCLKNMSDFKELVPEFYDVEAKGDFLVNKFEIDFGSRHDGTKVNDVALPPWAKSPEDF 509
+ N L N SD KEL+PEF+ + +FL N G R DG + DV LPPWAK+ F
Sbjct: 2894 YKNSLSNTSDVKELIPEFFYMP---EFLENSNSYHLGVRQDGEPLGDVVLPPWAKAANIF 2950
Score = 59.3 bits (137), Expect(2) = 4e-55
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Frame = +3
Query: 615 KAENVFHHVCYEGSVDLECIYDMNDRHALEVQIMEFGQVPKQLFTKPHVRRISP-QIAKP 791
KA N+F++V YEG+VDLE + D+ + A+E QI FGQ P Q+F H RR P IA P
Sbjct: 2945 KAANIFYYVTYEGAVDLENMDDLLQKSAIEDQIANFGQTPIQIFRVKHPRRGPPVPIAHP 3004
Query: 792 M 794
+
Sbjct: 3005 L 3005
>01_03_0103 -
12567986-12568141,12568307-12568442,12568751-12568824,
12568932-12569175,12569480-12569766,12570618-12571103,
12571348-12571459,12571540-12571745,12573071-12573276,
12573831-12574162,12574284-12574825,12574967-12576308,
12576386-12576457,12578438-12578505,12579011-12580174
Length = 1808
Score = 69.3 bits (162), Expect = 3e-12
Identities = 27/57 (47%), Positives = 44/57 (77%)
Frame = +3
Query: 456 TKVNDVALPPWAKSPEDFVCKLRDALESNYVSKHIHLWIDLIFGYKQRGEEAIKAEN 626
++++++ALP W S E+F+C R+ALES+ VS+ +H WID+ FGYK GE +++A+N
Sbjct: 826 SEMSNLALPSWVTSAEEFICLHRNALESDRVSRQLHHWIDITFGYKLSGESSVEAKN 882
>06_01_0288 - 2106113-2109055
Length = 980
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = -2
Query: 216 LNNVNHIKILGLSSHEIFLSVSPSDQDLVHPLVL 115
+ N++H++ L LSS+++ S+ PS DL++ VL
Sbjct: 803 IGNLSHLEALDLSSNDLSGSIPPSITDLINLSVL 836
>10_08_0867 +
21159931-21160075,21160288-21160409,21160539-21160660,
21160775-21160879,21160967-21161057,21161154-21161297,
21161415-21161783,21161902-21162099
Length = 431
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 208 IIQPLDLFCFIWFVSTRSTCCASKMDVSIIP 300
I+Q D C IWFV C S ++V I P
Sbjct: 143 IMQRADPSCKIWFVCKERLICTSGVEVEIAP 173
>05_07_0247 +
28643862-28644310,28645151-28645207,28645644-28648950,
28649069-28649144,28649356-28649426,28649524-28649589,
28649677-28649766,28649874-28650050,28650513-28650548
Length = 1442
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +3
Query: 18 NDLTQYPVFPWIIADYTSETIDFTKPETFRDLSKPMGALNPDRLEKLKERFHEMTDPKFL 197
+DL +Y W + D + P D + PMG DR+ + E E D + +
Sbjct: 579 SDLERYEKL-WEVNDGRDAGVKHVNPR--EDNTSPMGK---DRVSMILEASTENIDHEKI 632
Query: 198 YGSHYSAPGLV 230
Y SH+ P +V
Sbjct: 633 YNSHFEGPKVV 643
>07_01_0539 - 3985623-3986653,3986752-3987046
Length = 441
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 33 YPVFPWIIADYTSETIDFTKPETFRDLSKPMGALNPDRLEKLK 161
YP+ PW++ Y E++ +F K L P L +LK
Sbjct: 322 YPLLPWLMTPYEGESLS-APMASFNARQKAARTLGPRALSRLK 363
>12_02_1183 - 26764883-26765174,26765559-26765677
Length = 136
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +3
Query: 129 ALNPDRLEKLKERFHEM-TDPKFLYGSHYSAPGLVLFYLVRKYPQYMLCLQNGRFDHPDR 305
A N R + R+ + F + Y+A L++F + + P Y + NG D PD
Sbjct: 28 ATNHHRRSSERRRYEDSGVSVSFRRKAAYTAASLLVFLVAGQLPLYGVKKYNGDKDVPDP 87
Query: 306 MF--NSMKDVFNNCLKNMSDFKELVPE 380
++ N M NN L + L+ E
Sbjct: 88 LYWMNCMFASSNNTLMTLGIIPLLLSE 114
>09_04_0609 - 18929600-18929646,18929753-18929924,18930304-18930498,
18930691-18930801,18930885-18931097,18931643-18931720,
18931894-18932001,18932175-18932316,18932413-18933761,
18934492-18935121
Length = 1014
Score = 28.3 bits (60), Expect = 7.5
Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Frame = +3
Query: 336 NCLKNMSD--FKELVPEFYDV--EAKGDFLVNKFEIDFGSRHDGTKV-NDVALPPWAKSP 500
NC D F E++P ++ + G++++ KF + GS ++ N +A ++ S
Sbjct: 675 NCTIEEKDLLFAEVLPHALELMTDVFGNYVIQKF-FEKGSPQQKREIANKLAGHVFSLSL 733
Query: 501 EDFVCKLRDALESNYVSK---HIHLWIDLIFGYKQRGEEAIKAENVFHHVCYEGSVDLEC 671
+ + C++ L Y+SK + +++ Q E I E V L C
Sbjct: 734 QMYGCRVIQKLAKYYLSKISSDCYSIHRIVYSEHQLALEVIDLEQKIVLVGELDGHVLRC 793
Query: 672 IYDMNDRHALE 704
++D N H ++
Sbjct: 794 VHDQNGNHVIQ 804
>04_03_0795 -
19704354-19704464,19705152-19705214,19705298-19705378,
19705468-19705623,19705711-19705785,19706477-19706587,
19707206-19707304,19707453-19707546,19707779-19707838,
19709262-19709334,19711448-19711490,19711533-19711606,
19711985-19712075,19712170-19712214,19712533-19712589,
19713440-19713544,19713817-19713932,19714625-19714634,
19714810-19714920,19715502-19715594,19715664-19715690,
19715736-19715798,19716326-19716451,19716812-19716949,
19717164-19717832,19717949-19718123,19718269-19718450
Length = 1015
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 6/31 (19%)
Frame = +3
Query: 267 LCLQNGRF-----DHPDRMF-NSMKDVFNNC 341
+CLQNGRF DH R+F N++KD N C
Sbjct: 871 VCLQNGRFETGAEDHNVRLFLNNIKDQQNFC 901
>11_02_0105 -
8336309-8336392,8336514-8336579,8337279-8337431,
8337511-8337633,8337989-8338075,8338832-8338984,
8339069-8339152,8339252-8339320,8339622-8339705,
8339836-8340052,8341034-8341239
Length = 441
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 246 EPNKTKQVQGLNNVNHIKILGLSSHEIFLSVS 151
EP+K +V GL ++ K++ LS H + + V+
Sbjct: 163 EPDKRPEVMGLVDIFRAKVVDLSDHTLTIEVT 194
>09_06_0186 + 21427739-21428813,21428894-21428977,21429136-21429254
Length = 425
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 502 SGDFAHGGSATSFTLVPSCREPKSISNLFTRKSPFASTS*NSGTNSLK 359
+GD H S L S +EPK++ N R SPF +GT +K
Sbjct: 3 AGDNPHSISEKKAALRESPKEPKNVGNQQPRTSPFPKDK-AAGTVGIK 49
>01_01_0001 +
2449-2616,3357-3455,4457-4560,6136-6944,7028-7150,
7232-7320,7408-7608,8210-8311,9104-9187,9232-9244,
9504-9562
Length = 616
Score = 27.9 bits (59), Expect = 9.9
Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 8/114 (7%)
Frame = +3
Query: 333 NNCLKNMSDFKELVPEFYDVEAKGDF----LVNKFEIDFGSRHDGTKVNDVALPPWAKSP 500
NNC K+ D+ ++ YD E D+ + N F D G +G N + P
Sbjct: 235 NNCSKDSQDYNDMGEPRYDTETFDDYPSLPVTNFFSTD-GVGSNGVDKNHCSF----SVP 289
Query: 501 EDFVCKLRDALESNYVSKHIHLWIDLIFGYKQRGEEAIKAEN----VFHHVCYE 650
ED +LR E + S I+ IDLI + +A N +FH Y+
Sbjct: 290 ED---RLRHRDERMH-SFQINNNIDLIIESNSCSSDVFRASNSDSAIFHSDAYK 339
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,010,905
Number of Sequences: 37544
Number of extensions: 473712
Number of successful extensions: 1265
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1247
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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