Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16g24f
(699 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 364 e-101
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 364 e-101
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 364 e-101
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 335 3e-92
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 335 3e-92
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 242 4e-64
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 206 2e-53
AY071423-1|AAL49045.1| 330|Drosophila melanogaster RE50471p pro... 29 8.0
AY069272-1|AAL39417.1| 331|Drosophila melanogaster GM09977p pro... 29 8.0
AE014296-1353|AAF50499.1| 331|Drosophila melanogaster CG8209-PA... 29 8.0
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 364 bits (896), Expect = e-101
Identities = 160/207 (77%), Positives = 181/207 (87%)
Frame = +3
Query: 21 SSMSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVR 200
+ MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VR
Sbjct: 10 TDMSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVR 69
Query: 201 EPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRF 380
E DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRF
Sbjct: 70 EADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRF 129
Query: 381 YKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKA 560
YKNWY W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKA
Sbjct: 130 YKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKA 189
Query: 561 HIMEIQLNGGTIEDKVKWAREHLEKPI 641
H+MEIQLNGG+IEDKVKWAREHLEKPI
Sbjct: 190 HVMEIQLNGGSIEDKVKWAREHLEKPI 216
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 364 bits (895), Expect = e-101
Identities = 160/205 (78%), Positives = 180/205 (87%)
Frame = +3
Query: 27 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 206
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 207 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 386
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 387 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 566
NWY W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180
Query: 567 MEIQLNGGTIEDKVKWAREHLEKPI 641
MEIQLNGG+IEDKVKWAREHLEKPI
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPI 205
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 364 bits (895), Expect = e-101
Identities = 160/205 (78%), Positives = 180/205 (87%)
Frame = +3
Query: 27 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 206
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 207 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 386
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 387 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 566
NWY W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHV 180
Query: 567 MEIQLNGGTIEDKVKWAREHLEKPI 641
MEIQLNGG+IEDKVKWAREHLEKPI
Sbjct: 181 MEIQLNGGSIEDKVKWAREHLEKPI 205
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 335 bits (824), Expect = 3e-92
Identities = 147/192 (76%), Positives = 167/192 (86%)
Frame = +3
Query: 66 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 245
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 246 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 425
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 426 XXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDK 605
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 606 VKWAREHLEKPI 641
VKWAREHLEKPI
Sbjct: 181 VKWAREHLEKPI 192
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 335 bits (824), Expect = 3e-92
Identities = 147/192 (76%), Positives = 167/192 (86%)
Frame = +3
Query: 66 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 245
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 246 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXX 425
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 426 XXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDK 605
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 606 VKWAREHLEKPI 641
VKWAREHLEKPI
Sbjct: 181 VKWAREHLEKPI 192
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 242 bits (592), Expect = 4e-64
Identities = 105/123 (85%), Positives = 114/123 (92%)
Frame = +3
Query: 27 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 206
MSHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 207 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 386
DRPGSKINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 387 NWY 395
NWY
Sbjct: 121 NWY 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 206 bits (503), Expect = 2e-53
Identities = 90/108 (83%), Positives = 99/108 (91%)
Frame = +3
Query: 66 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 245
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 246 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 389
EAVT++ETPPM+ VG VGYIETP GLRAL+ VWA+H+SE+CRRRFYKN
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
>AY071423-1|AAL49045.1| 330|Drosophila melanogaster RE50471p
protein.
Length = 330
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 522 TQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPCR 650
T M + R++ + +E+ N G +E ++W H++ PIP R
Sbjct: 6 TLMDMGFPRERVEYALEVTSNKG-VEPAMEWLLAHVDDPIPSR 47
>AY069272-1|AAL39417.1| 331|Drosophila melanogaster GM09977p
protein.
Length = 331
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 522 TQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPCR 650
T M + R++ + +E+ N G +E ++W H++ PIP R
Sbjct: 6 TLMDMGFPRERVEYALEVTSNKG-VEPAMEWLLAHVDDPIPSR 47
>AE014296-1353|AAF50499.1| 331|Drosophila melanogaster CG8209-PA
protein.
Length = 331
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 522 TQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPCR 650
T M + R++ + +E+ N G +E ++W H++ PIP R
Sbjct: 6 TLMDMGFPRERVEYALEVTSNKG-VEPAMEWLLAHVDDPIPSR 47
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,723,990
Number of Sequences: 53049
Number of extensions: 732934
Number of successful extensions: 1734
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1734
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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